| Year |
Citation |
Score |
| 2024 |
Soto DC, Uribe-Salazar JM, Kaya G, Valdarrago R, Sekar A, Haghani NK, Hino K, La GN, Mariano NAF, Ingamells C, Baraban AE, Turner TN, Green ED, Simó S, Quon G, ... ... Dennis MY, et al. Gene expansions contributing to human brain evolution. Biorxiv : the Preprint Server For Biology. PMID 39386494 DOI: 10.1101/2024.09.26.615256 |
0.427 |
|
| 2024 |
Uribe-Salazar JM, Kaya G, Weyenberg K, Radke B, Hino K, Soto DC, Shiu JL, Zhang W, Ingamells C, Haghani NK, Xu E, Rosas J, Simó S, Miesfeld J, Glaser T, ... ... Dennis MY, et al. Zebrafish models of human-duplicated gene reveal novel functions in microglia and visual system development. Biorxiv : the Preprint Server For Biology. PMID 39314374 DOI: 10.1101/2024.09.11.612570 |
0.334 |
|
| 2024 |
Karageorgiou C, Gokcumen O, Dennis MY. Deciphering the role of structural variation in human evolution: a functional perspective. Current Opinion in Genetics & Development. 88: 102240. PMID 39121701 DOI: 10.1016/j.gde.2024.102240 |
0.438 |
|
| 2024 |
Ostridge HJ, Fontsere C, Lizano E, Soto DC, Schmidt JM, Saxena V, Alvarez-Estape M, Barratt CD, Gratton P, Bocksberger G, Lester JD, Dieguez P, Agbor A, Angedakin S, Assumang AK, ... ... Dennis MY, et al. Local genetic adaptation to habitat in wild chimpanzees. Biorxiv : the Preprint Server For Biology. PMID 39026872 DOI: 10.1101/2024.07.09.601734 |
0.519 |
|
| 2024 |
Oliveros AM, McDougall SA, Snyder MA, Snowden SK, Richard JD, Rao CM, Ponce M, Pitonza CJ, Ozcelik M, Mannina SS, Magna JR, Lopez AS, Gustafson LC, Glackin BK, Dolge AE, ... ... Dennis MK, et al. Genome sequence of bacteriophage Djungelskog isolated from an culture. Microbiology Resource Announcements. e0129423. PMID 38376224 DOI: 10.1128/mra.01294-23 |
0.397 |
|
| 2023 |
Haines I, Blakely J, Branson A, Estrada D, Fernandez Robles R, Fitzgerald K, Jeffers S, Leung T, Munoz J, Olivos A, Ramirez A, Smith C, Spere J, Tavarez I, Wood I, ... ... Dennis MK, et al. Complete genome sequence of bacteriophage MrAaronian isolated from an culture. Microbiology Resource Announcements. e0077823. PMID 37933970 DOI: 10.1128/MRA.00778-23 |
0.314 |
|
| 2023 |
Behera S, LeFaive J, Orchard P, Mahmoud M, Paulin LF, Farek J, Soto DC, Parker SCJ, Smith AV, Dennis MY, Zook JM, Sedlazeck FJ. FixItFelix: improving genomic analysis by fixing reference errors. Genome Biology. 24: 31. PMID 36810122 DOI: 10.1186/s13059-023-02863-7 |
0.365 |
|
| 2023 |
Soto DC, Uribe-Salazar JM, Shew CJ, Sekar A, McGinty SP, Dennis MY. Genomic structural variation: A complex but important driver of human evolution. American Journal of Biological Anthropology. PMID 36794631 DOI: 10.1002/ajpa.24713 |
0.492 |
|
| 2022 |
Aganezov S, Yan SM, Soto DC, Kirsche M, Zarate S, Avdeyev P, Taylor DJ, Shafin K, Shumate A, Xiao C, Wagner J, McDaniel J, Olson ND, Sauria MEG, Vollger MR, ... ... Dennis MY, et al. A complete reference genome improves analysis of human genetic variation. Science (New York, N.Y.). 376: eabl3533. PMID 35357935 DOI: 10.1126/science.abl3533 |
0.463 |
|
| 2022 |
Nurk S, Koren S, Rhie A, Rautiainen M, Bzikadze AV, Mikheenko A, Vollger MR, Altemose N, Uralsky L, Gershman A, Aganezov S, Hoyt SJ, Diekhans M, Logsdon GA, Alonge M, ... ... Dennis MY, et al. The complete sequence of a human genome. Science (New York, N.Y.). 376: 44-53. PMID 35357919 DOI: 10.1126/science.abj6987 |
0.649 |
|
| 2022 |
Altemose N, Logsdon GA, Bzikadze AV, Sidhwani P, Langley SA, Caldas GV, Hoyt SJ, Uralsky L, Ryabov FD, Shew CJ, Sauria MEG, Borchers M, Gershman A, Mikheenko A, Shepelev VA, ... ... Dennis MY, et al. Complete genomic and epigenetic maps of human centromeres. Science (New York, N.Y.). 376: eabl4178. PMID 35357911 DOI: 10.1126/science.abl4178 |
0.64 |
|
| 2022 |
Zhu Y, Gomez JA, Laufer BI, Mordaunt CE, Mouat JS, Soto DC, Dennis MY, Benke KS, Bakulski KM, Dou J, Marathe R, Jianu JM, Williams LA, Gutierrez Fugón OJ, Walker CK, et al. Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism. Genome Biology. 23: 46. PMID 35168652 DOI: 10.1186/s13059-022-02613-1 |
0.327 |
|
| 2021 |
Shew CJ, Carmona-Mora P, Soto DC, Mastoras M, Roberts E, Rosas J, Jagannathan D, Kaya G, O'Geene H, Dennis MY. Diverse molecular mechanisms contribute to differential expression of human duplicated genes. Molecular Biology and Evolution. PMID 34009325 DOI: 10.1093/molbev/msab131 |
0.427 |
|
| 2020 |
Colón-Rodríguez A, Uribe-Salazar JM, Weyenberg KB, Sriram A, Quezada A, Kaya G, Jao E, Radke B, Lein PJ, Dennis MY. Assessment of Autism Zebrafish Mutant Models Using a High-Throughput Larval Phenotyping Platform. Frontiers in Cell and Developmental Biology. 8: 586296. PMID 33330465 DOI: 10.3389/fcell.2020.586296 |
0.326 |
|
| 2020 |
Maggiolini FAM, Sanders AD, Shew CJ, Sulovari A, Mao Y, Puig M, Catacchio CR, Dellino M, Palmisano D, Mercuri L, Bitonto M, Porubský D, Cáceres M, Eichler EE, Ventura M, ... Dennis MY, et al. Single-cell strand sequencing of a macaque genome reveals multiple nested inversions and breakpoint reuse during primate evolution. Genome Research. PMID 33093070 DOI: 10.1101/gr.265322.120 |
0.796 |
|
| 2020 |
Miga KH, Koren S, Rhie A, Vollger MR, Gershman A, Bzikadze A, Brooks S, Howe E, Porubsky D, Logsdon GA, Schneider VA, Potapova T, Wood J, Chow W, Armstrong J, ... ... Dennis MY, et al. Telomere-to-telomere assembly of a complete human X chromosome. Nature. PMID 32663838 DOI: 10.1038/S41586-020-2547-7 |
0.623 |
|
| 2020 |
Soto DC, Shew C, Mastoras M, Schmidt JM, Sahasrabudhe R, Kaya G, Andrés AM, Dennis MY. Identification of Structural Variation in Chimpanzees Using Optical Mapping and Nanopore Sequencing. Genes. 11. PMID 32143403 DOI: 10.3390/genes11030276 |
0.469 |
|
| 2017 |
Dennis MY, Harshman L, Nelson BJ, Penn O, Cantsilieris S, Huddleston J, Antonacci F, Penewit K, Denman L, Raja A, Baker C, Mark K, Malig M, Janke N, Espinoza C, et al. The evolution and population diversity of human-specific segmental duplications. Nature Ecology & Evolution. 1: 69. PMID 28812736 DOI: 10.1038/s41559-016-0069 |
0.799 |
|
| 2017 |
Dennis MY, Harshman L, Nelson BJ, Penn O, Cantsilieris S, Huddleston J, Antonacci F, Penewit K, Denman L, Raja A, Baker C, Mark K, Malig M, Janke N, Espinoza C, et al. The evolution and population diversity of human-specific segmental duplications. Nature Ecology & Evolution. 1. PMID 28580430 DOI: 10.1038/S41559-016-0069 |
0.797 |
|
| 2017 |
Dougherty ML, Nuttle X, Penn O, Nelson BJ, Huddleston J, Baker C, Harshman L, Duyzend MH, Ventura M, Antonacci F, Sandstrom R, Dennis MY, Eichler EE. The birth of a human-specific neural gene by incomplete duplication and gene fusion. Genome Biology. 18: 49. PMID 28279197 DOI: 10.1186/S13059-017-1163-9 |
0.744 |
|
| 2016 |
Dennis MY, Eichler EE. Human adaptation and evolution by segmental duplication. Current Opinion in Genetics & Development. 41: 44-52. PMID 27584858 DOI: 10.1016/j.gde.2016.08.001 |
0.606 |
|
| 2015 |
Mazina V, Gerdts J, Trinh S, Ankenman K, Ward T, Dennis MY, Girirajan S, Eichler EE, Bernier R. Epigenetics of autism-related impairment: copy number variation and maternal infection. Journal of Developmental and Behavioral Pediatrics : Jdbp. 36: 61-7. PMID 25629966 DOI: 10.1097/Dbp.0000000000000126 |
0.605 |
|
| 2015 |
Chaisson MJ, Huddleston J, Dennis MY, Sudmant PH, Malig M, Hormozdiari F, Antonacci F, Surti U, Sandstrom R, Boitano M, Landolin JM, Stamatoyannopoulos JA, Hunkapiller MW, Korlach J, Eichler EE. Resolving the complexity of the human genome using single-molecule sequencing. Nature. 517: 608-11. PMID 25383537 DOI: 10.1038/Nature13907 |
0.777 |
|
| 2014 |
Antonacci F, Dennis MY, Huddleston J, Sudmant PH, Steinberg KM, Rosenfeld JA, Miroballo M, Graves TA, Vives L, Malig M, Denman L, Raja A, Stuart A, Tang J, Munson B, et al. Palindromic GOLGA8 core duplicons promote chromosome 15q13.3 microdeletion and evolutionary instability. Nature Genetics. 46: 1293-302. PMID 25326701 DOI: 10.1038/Ng.3120 |
0.783 |
|
| 2014 |
Huddleston J, Ranade S, Malig M, Antonacci F, Chaisson M, Hon L, Sudmant PH, Graves TA, Alkan C, Dennis MY, Wilson RK, Turner SW, Korlach J, Eichler EE. Reconstructing complex regions of genomes using long-read sequencing technology. Genome Research. 24: 688-96. PMID 24418700 DOI: 10.1101/Gr.168450.113 |
0.78 |
|
| 2013 |
Girirajan S, Dennis MY, Baker C, Malig M, Coe BP, Campbell CD, Mark K, Vu TH, Alkan C, Cheng Z, Biesecker LG, Bernier R, Eichler EE. Refinement and discovery of new hotspots of copy-number variation associated with autism spectrum disorder. American Journal of Human Genetics. 92: 221-37. PMID 23375656 DOI: 10.1016/J.Ajhg.2012.12.016 |
0.788 |
|
| 2012 |
Dennis MY, Nuttle X, Sudmant PH, Antonacci F, Graves TA, Nefedov M, Rosenfeld JA, Sajjadian S, Malig M, Kotkiewicz H, Curry CJ, Shafer S, Shaffer LG, de Jong PJ, Wilson RK, et al. Evolution of human-specific neural SRGAP2 genes by incomplete segmental duplication. Cell. 149: 912-22. PMID 22559943 DOI: 10.1016/J.Cell.2012.03.033 |
0.791 |
|
| 2012 |
Karakoc E, Alkan C, O'Roak BJ, Dennis MY, Vives L, Mark K, Rieder MJ, Nickerson DA, Eichler EE. Detection of structural variants and indels within exome data. Nature Methods. 9: 176-8. PMID 22179552 DOI: 10.1038/Nmeth.1810 |
0.751 |
|
| 2010 |
Antonellis A, Dennis MY, Burzynski G, Huynh J, Maduro V, Hodonsky CJ, Khajavi M, Szigeti K, Mukkamala S, Bessling SL, Pavan WJ, McCallion AS, Lupski JR, Green ED. A rare myelin protein zero (MPZ) variant alters enhancer activity in vitro and in vivo. Plos One. 5: e14346. PMID 21179557 DOI: 10.1371/Journal.Pone.0014346 |
0.327 |
|
| 2006 |
Harold D, Paracchini S, Scerri T, Dennis M, Cope N, Hill G, Moskvina V, Walter J, Richardson AJ, Owen MJ, Stein JF, Green ED, O'Donovan MC, Williams J, Monaco AP. Further evidence that the KIAA0319 gene confers susceptibility to developmental dyslexia. Molecular Psychiatry. 11: 1085-91, 1061. PMID 17033633 DOI: 10.1038/Sj.Mp.4001904 |
0.459 |
|
| 2006 |
Harold D, Paracchini S, Scerri T, Dennis M, Cope N, Hill G, Moskvina V, Walter J, Richardson AJ, Owen MJ, Stein JF, Green ED, O'Donovan MC, Williams J, Monaco AP. Linkage disequilibrium structure of KIAA0319 and DCDC2, two candidate susceptibility genes for developmental dyslexia Molecular Psychiatry. 11: 1061. DOI: 10.1038/Sj.Mp.4001930 |
0.411 |
|
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