Jessica Binder - Publications

Affiliations: 
2013- University of New Mexico, Albuquerque, NM, United States 

4/14 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Binder J, Ursu O, Bologa C, Jiang S, Maphis N, Dadras S, Chisholm D, Weick J, Myers O, Kumar P, Yang JJ, Bhaskar K, Oprea TI. Machine learning prediction and tau-based screening identifies potential Alzheimer's disease genes relevant to immunity. Communications Biology. 5: 125. PMID 35149761 DOI: 10.1038/s42003-022-03068-7  0.595
2021 Jiang S, Maphis NM, Binder J, Chisholm D, Weston L, Duran W, Peterson C, Zimmerman A, Mandell MA, Jett SD, Bigio E, Geula C, Mellios N, Weick JP, Rosenberg GA, et al. Proteopathic tau primes and activates interleukin-1β via myeloid-cell-specific MyD88- and NLRP3-ASC-inflammasome pathway. Cell Reports. 36: 109720. PMID 34551296 DOI: 10.1016/j.celrep.2021.109720  0.417
2020 Binder JL, Chander P, Deretic V, Weick JP, Bhaskar K. Optical induction of autophagy via Transcription factor EB (TFEB) reduces pathological tau in neurons. Plos One. 15: e0230026. PMID 32208437 DOI: 10.1371/Journal.Pone.0230026  0.557
2017 Maphis NM, Jiang S, Binder J, Wright C, Gopalan B, Lamb BT, Bhaskar K. Whole Genome Expression Analysis in a Mouse Model of Tauopathy Identifies MECP2 as a Possible Regulator of Tau Pathology. Frontiers in Molecular Neuroscience. 10: 69. PMID 28367114 DOI: 10.3389/Fnmol.2017.00069  0.468
Low-probability matches (unlikely to be authored by this person)
2022 Xu J, Mao C, Hou Y, Luo Y, Binder JL, Zhou Y, Bekris LM, Shin J, Hu M, Wang F, Eng C, Oprea TI, Flanagan ME, Pieper AA, Cummings J, et al. Interpretable deep learning translation of GWAS and multi-omics findings to identify pathobiology and drug repurposing in Alzheimer's disease. Cell Reports. 41: 111717. PMID 36450252 DOI: 10.1016/j.celrep.2022.111717  0.289
2013 Raines SM, Rane HS, Bernardo SM, Binder JL, Lee SA, Parra KJ. Deletion of vacuolar proton-translocating ATPase V(o)a isoforms clarifies the role of vacuolar pH as a determinant of virulence-associated traits in Candida albicans. The Journal of Biological Chemistry. 288: 6190-201. PMID 23316054 DOI: 10.1074/jbc.M112.426197  0.122
2022 Binder JL, Berendzen J, Stevens AO, He Y, Wang J, Dokholyan NV, Oprea TI. AlphaFold illuminates half of the dark human proteins. Current Opinion in Structural Biology. 74: 102372. PMID 35439658 DOI: 10.1016/j.sbi.2022.102372  0.112
2013 Rane HS, Bernardo SM, Raines SM, Binder JL, Parra KJ, Lee SA. Candida albicans VMA3 is necessary for V-ATPase assembly and function and contributes to secretion and filamentation. Eukaryotic Cell. 12: 1369-82. PMID 23913543 DOI: 10.1128/EC.00118-13  0.101
2022 Yang JJ, Gessner CR, Duerksen JL, Biber D, Binder JL, Ozturk M, Foote B, McEntire R, Stirling K, Ding Y, Wild DJ. Knowledge graph analytics platform with LINCS and IDG for Parkinson's disease target illumination. Bmc Bioinformatics. 23: 37. PMID 35021991 DOI: 10.1186/s12859-021-04530-9  0.097
2023 Sanjak J, Binder J, Yadaw AS, Zhu Q, Mathé EA. Clustering rare diseases within an ontology-enriched knowledge graph. Journal of the American Medical Informatics Association : Jamia. PMID 37759342 DOI: 10.1093/jamia/ocad186  0.094
2022 Kropiwnicki E, Binder JL, Yang JJ, Holmes J, Lachmann A, Clarke DJB, Sheils T, Kelleher KJ, Metzger VT, Bologa CG, Oprea TI, Ma'ayan A. Getting Started with the IDG KMC Datasets and Tools. Current Protocols. 2: e355. PMID 35085427 DOI: 10.1002/cpz1.355  0.092
2014 Rane HS, Bernardo SM, Hayek SR, Binder JL, Parra KJ, Lee SA. The contribution of Candida albicans vacuolar ATPase subunit V₁B, encoded by VMA2, to stress response, autophagy, and virulence is independent of environmental pH. Eukaryotic Cell. 13: 1207-21. PMID 25038082 DOI: 10.1128/EC.00135-14  0.077
2023 Evangelista JE, Clarke DJB, Xie Z, Marino GB, Utti V, Jenkins SL, Ahooyi TM, Bologa CG, Yang JJ, Binder JL, Kumar P, Lambert CG, Grethe JS, Wenger E, Taylor D, et al. Toxicology knowledge graph for structural birth defects. Communications Medicine. 3: 98. PMID 37460679 DOI: 10.1038/s43856-023-00329-2  0.029
2021 Jones HW, Burdette MK, Bandera Y, Zhang E, Foulger IK, Binder J, Weick J, Foulger SH. Sequential intraparticle Förster resonance energy transfer for multi-wavelength bioimaging Optical Materials Express. 11: 1742. DOI: 10.1364/OME.424166  0.01
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