Carlos E. Castro - Publications

Affiliations: 
Mechanical Engineering Ohio State University, Columbus, Columbus, OH 
Area:
DNA nanotechnology
Website:
https://nbl.osu.edu/

75 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Teng T, Bernal-Chanchavac J, Stephanopoulos N, Castro CE. Construction of Reconfigurable and Polymorphic DNA Origami Assemblies with Coiled-Coil Patches and Patterns. Advanced Science (Weinheim, Baden-Wurttemberg, Germany). e2307257. PMID 38459678 DOI: 10.1002/advs.202307257  0.387
2024 Robbins A, Hildebolt H, Neuhoff M, Beshay P, Winter JO, Castro CE, Bundschuh R, Poirier MG. Cooperative control of a DNA origami force sensor. Scientific Reports. 14: 4132. PMID 38374280 DOI: 10.1038/s41598-024-53841-3  0.328
2023 Wang Y, Jin X, Castro C. Accelerating the characterization of dynamic DNA origami devices with deep neural networks. Scientific Reports. 13: 15196. PMID 37709771 DOI: 10.1038/s41598-023-41459-w  0.328
2023 Pfeifer WG, Huang CM, Poirier MG, Arya G, Castro CE. Versatile computer-aided design of free-form DNA nanostructures and assemblies. Science Advances. 9: eadi0697. PMID 37494445 DOI: 10.1126/sciadv.adi0697  0.318
2023 Jergens E, de Araujo Fernandes-Junior S, Cui Y, Robbins A, Castro CE, Poirier MG, Gurcan MN, Otero JJ, Winter JO. DNA-caged nanoparticles electrostatic self-assembly. Nanoscale. PMID 37184508 DOI: 10.1039/d3nr01424j  0.349
2023 Beshay PE, Johson JA, Le JV, Castro CE. Design, Assembly, and Function of DNA Origami Mechanisms. Methods in Molecular Biology (Clifton, N.J.). 2639: 21-49. PMID 37166709 DOI: 10.1007/978-1-0716-3028-0_2  0.402
2023 Wang Y, Sensale S, Pedrozo M, Huang CM, Poirier MG, Arya G, Castro CE. Steric Communication between Dynamic Components on DNA Nanodevices. Acs Nano. PMID 37072126 DOI: 10.1021/acsnano.2c12455  0.31
2022 Kucinic A, Huang CM, Wang J, Su HJ, Castro CE. DNA origami tubes with reconfigurable cross-sections. Nanoscale. PMID 36520453 DOI: 10.1039/d2nr05416g  0.428
2022 Shahhosseini M, Beshay PE, Akbari E, Roki N, Lucas CR, Avendano A, Song JW, Castro CE. Multiplexed Detection of Molecular Interactions with DNA Origami Engineered Cells in 3D Collagen Matrices. Acs Applied Materials & Interfaces. PMID 36509424 DOI: 10.1021/acsami.2c07971  0.758
2022 Lucas CR, Halley PD, Chowdury AA, Harrington BK, Beaver L, Lapalombella R, Johnson AJ, Hertlein EK, Phelps MA, Byrd JC, Castro CE. DNA Origami Nanostructures Elicit Dose-Dependent Immunogenicity and Are Nontoxic up to High Doses In Vivo. Small (Weinheim An Der Bergstrasse, Germany). e2108063. PMID 35633287 DOI: 10.1002/smll.202108063  0.718
2022 Kaufhold WT, Pfeifer W, Castro CE, Di Michele L. Probing the Mechanical Properties of DNA Nanostructures with Metadynamics. Acs Nano. PMID 35580231 DOI: 10.1021/acsnano.1c08999  0.424
2022 Darcy M, Crocker K, Wang Y, Le JV, Mohammadiroozbahani G, Abdelhamid MAS, Craggs TD, Castro CE, Bundschuh R, Poirier MG. High-Force Application by a Nanoscale DNA Force Spectrometer. Acs Nano. PMID 35385658 DOI: 10.1021/acsnano.1c10698  0.325
2022 Lin-Shiao E, Pfeifer WG, Shy BR, Saffari Doost M, Chen E, Vykunta VS, Hamilton JR, Stahl EC, Lopez DM, Sandoval Espinoza CR, Deyanov AE, Lew RJ, Poirer MG, Marson A, Castro CE, et al. CRISPR-Cas9-mediated nuclear transport and genomic integration of nanostructured genes in human primary cells. Nucleic Acids Research. PMID 35104875 DOI: 10.1093/nar/gkac049  0.415
2022 Johnson JA, Kolliopoulos V, Castro CE. Correction: Co-self-assembly of multiple DNA origami nanostructures in a single pot. Chemical Communications (Cambridge, England). 58: 716. PMID 34939626 DOI: 10.1039/d1cc90444b  0.313
2021 Wang Y, Le JV, Crocker K, Darcy MA, Halley PD, Zhao D, Andrioff N, Croy C, Poirier MG, Bundschuh R, Castro CE. A nanoscale DNA force spectrometer capable of applying tension and compression on biomolecules. Nucleic Acids Research. PMID 34358322 DOI: 10.1093/nar/gkab656  0.351
2021 Johnson JA, Kolliopoulos V, Castro CE. Co-self-assembly of multiple DNA origami nanostructures in a single pot. Chemical Communications (Cambridge, England). 57: 4795-4798. PMID 33982710 DOI: 10.1039/d1cc00049g  0.339
2021 Huang CM, Kucinic A, Johnson JA, Su HJ, Castro CE. Integrated computer-aided engineering and design for DNA assemblies. Nature Materials. PMID 33875848 DOI: 10.1038/s41563-021-00978-5  0.444
2020 Arroyo-Currás N, Sadeia M, Ng AK, Fyodorova Y, Williams N, Afif T, Huang CM, Ogden N, Andresen Eguiluz RC, Su HJ, Castro CE, Plaxco KW, Lukeman PS. An electrochemical biosensor exploiting binding-induced changes in electron transfer of electrode-attached DNA origami to detect hundred nanometer-scale targets. Nanoscale. PMID 32578652 DOI: 10.1039/D0Nr00952K  0.344
2020 DeLuca M, Shi Z, Castro CE, Arya G. Dynamic DNA nanotechnology: toward functional nanoscale devices Nanoscale Horizons. 5: 182-201. DOI: 10.1039/c9nh00529c  0.383
2020 Akbari E, Shahhosseini M, Song JW, Castro CE. Multiplexed DNA Origami Force Sensors with Programmable Sensitivities Biophysical Journal. 118: 617a-618a. DOI: 10.1016/J.Bpj.2019.11.3332  0.392
2020 Beshay PE, Kolotka KL, Song JW, Castro CE. Direct Measurement of Fluid Shear Stress in 3-D Matrices using DNA-Based Force Spectroscopy Biophysical Journal. 118: 219a. DOI: 10.1016/J.Bpj.2019.11.1300  0.387
2019 Zhao D, Le JV, Darcy MA, Crocker K, Poirier MG, Castro C, Bundschuh R. Quantitative Modeling of Nucleosome Unwrapping from Both Ends. Biophysical Journal. PMID 31732143 DOI: 10.1016/J.Bpj.2019.09.048  0.503
2019 Johnson JA, Dehankar A, Winter JO, Castro CE. Reciprocal Control of Hierarchical DNA Origami-Nanoparticle Assemblies. Nano Letters. PMID 31664841 DOI: 10.1016/J.Bpj.2019.11.3361  0.489
2019 Dehankar A, Porter T, Johnson JA, Castro CE, Winter JO. Compact quantum dot surface modification to enable emergent behaviors in quantum dot-DNA composites. The Journal of Chemical Physics. 151: 144706. PMID 31615228 DOI: 10.1063/1.5124690  0.381
2019 McWilliams EM, Lucas CR, Chen T, Harrington BK, Wasmuth R, Campbell A, Rogers KA, Cheney CM, Mo X, Andritsos LA, Awan FT, Woyach J, Carson WE, Butchar J, Tridandapani S, ... ... Castro CE, et al. Anti-BAFF-R antibody VAY-736 demonstrates promising preclinical activity in CLL and enhances effectiveness of ibrutinib. Blood Advances. 3: 447-460. PMID 30737226 DOI: 10.1182/Bloodadvances.2018025684  0.688
2019 Johnson JA, Dehankar A, Robbins A, Kabtiyal P, Jergens E, Ho Lee K, Johnston-Halperin E, Poirier M, Castro CE, Winter JO. The path towards functional nanoparticle-DNA origami composites Materials Science and Engineering: R: Reports. 138: 153-209. DOI: 10.1016/J.Mser.2019.06.003  0.407
2019 Halley PD, Patton RA, Chowdhury A, Byrd JC, Castro CE. Low-cost, simple, and scalable self-assembly of DNA origami nanostructures Nano Research. 12: 1207-1215. DOI: 10.1007/S12274-019-2384-X  0.487
2018 Huang CM, Kucinic A, Le JV, Castro CE, Su HJ. Uncertainty quantification of a DNA origami mechanism using a coarse-grained model and kinematic variance analysis. Nanoscale. PMID 30519693 DOI: 10.1039/C8Nr06377J  0.518
2018 Zhou L, Marras AE, Huang CM, Castro CE, Su HJ. Paper Origami-Inspired Design and Actuation of DNA Nanomachines with Complex Motions. Small (Weinheim An Der Bergstrasse, Germany). e1802580. PMID 30369060 DOI: 10.1002/Smll.201802580  0.801
2018 Marras AE, Shi Z, Lindell Iii MG, Patton RA, Huang CM, Zhou L, Su HJ, Arya G, Castro CE. Cation-Activated Avidity for Rapid Reconfiguration of DNA Nanodevices. Acs Nano. PMID 30169013 DOI: 10.1021/Acsnano.8B04817  0.795
2018 Lauback S, Mattioli KR, Marras AE, Armstrong M, Rudibaugh TP, Sooryakumar R, Castro CE. Real-time magnetic actuation of DNA nanodevices via modular integration with stiff micro-levers. Nature Communications. 9: 1446. PMID 29654315 DOI: 10.1038/S41467-018-03601-5  0.771
2018 Ke Y, Castro C, Choi JH. Structural DNA Nanotechnology: Artificial Nanostructures for Biomedical Research. Annual Review of Biomedical Engineering. PMID 29618223 DOI: 10.1146/Annurev-Bioeng-062117-120904  0.533
2018 Lei D, Marras AE, Liu J, Huang CM, Zhou L, Castro CE, Su HJ, Ren G. Three-dimensional structural dynamics of DNA origami Bennett linkages using individual-particle electron tomography. Nature Communications. 9: 592. PMID 29426880 DOI: 10.1038/S41467-018-03018-0  0.781
2017 Akbari E, Mollica MY, Lucas CR, Bushman SM, Patton RA, Shahhosseini M, Song JW, Castro CE. Engineering Cell Surface Function with DNA Origami. Advanced Materials (Deerfield Beach, Fla.). PMID 29027713 DOI: 10.1002/Adma.201703632  0.769
2017 Hudoba MW, Luo Y, Zacharias A, Poirier MG, Castro CE. A Dynamic DNA Origami Device for Measuring Compressive Depletion Forces. Acs Nano. PMID 28582611 DOI: 10.1021/Acsnano.6B07097  0.472
2017 Shi Z, Castro CE, Arya G. Conformational Dynamics of Mechanically-Compliant DNA Nanostructures from Coarse-Grained Molecular Dynamics Simulations. Acs Nano. PMID 28423273 DOI: 10.1021/Acsnano.7B00242  0.515
2017 Liang B, Nagarajan A, Hudoba MW, Alvarez R, Castro C, Soghrati S. Automated quantification of the impact of defects on the mechanical behavior of DNA origami nanoplates. Journal of Biomechanical Engineering. PMID 28241201 DOI: 10.1115/1.4036022  0.517
2017 Castro CE, Dietz H, Högberg B. DNA origami devices for molecular-scale precision measurements Mrs Bulletin. 42: 925-929. DOI: 10.1557/Mrs.2017.273  0.662
2017 Wang P, Chatterjee G, Yan H, LaBean TH, Turberfield AJ, Castro CE, Seelig G, Ke Y. Practical aspects of structural and dynamic DNA nanotechnology Mrs Bulletin. 42: 889-896. DOI: 10.1557/Mrs.2017.272  0.444
2017 Su H, Castro CE, Marras AE, Zhou L. The Kinematic Principle for Designing Deoxyribose Nucleic Acid Origami Mechanisms: Challenges and Opportunities1 Journal of Mechanical Design. 139. DOI: 10.1115/1.4036216  0.789
2017 Zhou L, Su H, Marras AE, Huang C, Castro CE. Projection kinematic analysis of DNA origami mechanisms based on a two-dimensional TEM image Mechanism and Machine Theory. 109: 22-38. DOI: 10.1016/J.Mechmachtheory.2016.11.010  0.74
2017 Patton R, Castro C. Utilizing DNA Origami Nanostructures with Designed Entropic Springs for High Throughput, Single-Molecule Force Spectroscopy Biophysical Journal. 112: 301a. DOI: 10.1016/J.Bpj.2016.11.1630  0.465
2017 Akbari E, Mollica MY, Lucas CR, Bushman SM, Patton RA, Shahhosseini M, Song JW, Castro CE. Cell-Membrane Engineering: Engineering Cell Surface Function with DNA Origami (Adv. Mater. 46/2017) Advanced Materials. 29. DOI: 10.1002/Adma.201770328  0.737
2016 Le JV, Luo Y, Darcy MA, Lucas CR, Goodwin MF, Poirier MG, Castro CE. Probing Nucleosome Stability With a DNA Origami Nanocaliper. Acs Nano. PMID 27362329 DOI: 10.1021/Acsnano.6B03218  0.781
2016 Kearney CJ, Lucas CR, O'Brien FJ, Castro CE. DNA Origami: Folded DNA-Nanodevices That Can Direct and Interpret Cell Behavior. Advanced Materials (Deerfield Beach, Fla.). PMID 26840503 DOI: 10.1002/Adma.201504733  0.801
2016 Halley PD, Lucas CR, McWilliams EM, Webber MJ, Patton RA, Kural C, Lucas DM, Byrd JC, Castro CE. DNA Origami: Daunorubicin-Loaded DNA Origami Nanostructures Circumvent Drug-Resistance Mechanisms in a Leukemia Model (Small 3/2016). Small (Weinheim An Der Bergstrasse, Germany). 12: 307. PMID 26765573 DOI: 10.1002/Smll.201670014  0.773
2016 Zhou L, Marras AE, Castro CE, Su HJ. Pseudorigid-body models of compliant DNA origami mechanisms Journal of Mechanisms and Robotics. 8. DOI: 10.1115/1.4032213  0.796
2016 Su H, Castro CE. The Rise of the DNA Nanorobots Mechanical Engineering. 138: 44-49. DOI: 10.1115/1.2016-Aug-3  0.521
2016 Marras AE, Zhou L, Kolliopoulos V, Su HJ, Castro CE. Directing folding pathways for multi-component DNA origami nanostructures with complex topology New Journal of Physics. 18: 055005. DOI: 10.1088/1367-2630/18/5/055005  0.769
2016 Hudoba MW, Luo Y, Patton R, Poirier MG, Castro C. Entropically Controlled Nanomechanical DNA Origami Devices Biophysical Journal. 110: 656a. DOI: 10.1016/J.Bpj.2015.11.3510  0.49
2016 Johnson JA, Dehankar A, Fan Q, Winter J, Castro C. Dynamic Control of DNA Origami Nanostructures via Gold Nanoparticles Biophysical Journal. 110: 566a. DOI: 10.1016/J.Bpj.2015.11.3030  0.448
2016 Le JV, Luo Y, Lucas CR, Poirier MG, Castro CE. Characterization of Nucleosomes using DNA Origami Biophysical Journal. 110: 501a-502a. DOI: 10.1016/J.Bpj.2015.11.2681  0.784
2015 Halley PD, Lucas CR, McWilliams EM, Webber MJ, Patton RA, Kural C, Lucas DM, Byrd JC, Castro CE. Daunorubicin-Loaded DNA Origami Nanostructures Circumvent Drug-Resistance Mechanisms in a Leukemia Model. Small (Weinheim An Der Bergstrasse, Germany). PMID 26583570 DOI: 10.1002/Smll.201502118  0.751
2015 Zhou L, Marras AE, Su HJ, Castro CE. Direct design of an energy landscape with bistable DNA origami mechanisms. Nano Letters. 15: 1815-21. PMID 25666726 DOI: 10.1021/Nl5045633  0.773
2015 Castro CE, Su HJ, Marras AE, Zhou L, Johnson J. Mechanical design of DNA nanostructures. Nanoscale. 7: 5913-21. PMID 25655237 DOI: 10.1039/C4Nr07153K  0.79
2015 Marras AE, Zhou L, Su HJ, Castro CE. Programmable motion of DNA origami mechanisms. Proceedings of the National Academy of Sciences of the United States of America. 112: 713-8. PMID 25561550 DOI: 10.1073/Pnas.1408869112  0.778
2015 Luo Y, Hoduba MW, Poirier MG, Castro CE. Design and Characterization of Force-Sensitive DNA Origami Components Biophysical Journal. 108: 627a. DOI: 10.1016/J.Bpj.2014.11.3411  0.509
2014 Gupta C, Liao WC, Gallego-Perez D, Castro CE, Lee LJ. DNA translocation through short nanofluidic channels under asymmetric pulsed electric field. Biomicrofluidics. 8: 024114. PMID 24803963 DOI: 10.1063/1.4871595  0.492
2014 Zhou L, Marras AE, Su HJ, Castro CE. DNA origami compliant nanostructures with tunable mechanical properties. Acs Nano. 8: 27-34. PMID 24351090 DOI: 10.1021/Nn405408G  0.8
2014 Fan Q, Nabar G, Miller C, Castro C, Winter J. Photo-switchable quantum dots based on reversible FRET Proceedings of Spie. 8954. DOI: 10.1117/12.2038611  0.342
2013 Wu Y, Kwak KJ, Agarwal K, Marras A, Wang C, Mao Y, Huang X, Ma J, Yu B, Lee R, Vachani A, Marcucci G, Byrd JC, Muthusamy N, Otterson G, ... ... Castro CE, et al. Detection of extracellular RNAs in cancer and viral infection via tethered cationic lipoplex nanoparticles containing molecular beacons. Analytical Chemistry. 85: 11265-74. PMID 24102152 DOI: 10.1021/Ac401983W  0.691
2011 Tam JM, Castro CE, Heath RJ, Mansour MK, Cardenas ML, Xavier RJ, Lang MJ, Vyas JM. Use of an optical trap for study of host-pathogen interactions for dynamic live cell imaging. Journal of Visualized Experiments : Jove. PMID 21841755 DOI: 10.3791/3123  0.593
2011 Castro CE, Dong J, Boyce MC, Lindquist S, Lang MJ. Physical properties of polymorphic yeast prion amyloid fibers Biophysical Journal. 101: 439-448. PMID 21767497 DOI: 10.1016/J.Bpj.2011.06.016  0.645
2011 Jungmann R, Scheible M, Kuzyk A, Pardatscher G, Castro CE, Simmel FC. DNA origami-based nanoribbons: assembly, length distribution, and twist. Nanotechnology. 22: 275301. PMID 21597145 DOI: 10.1088/0957-4484/22/27/275301  0.507
2011 Castro CE, Kilchherr F, Kim DN, Shiao EL, Wauer T, Wortmann P, Bathe M, Dietz H. A primer to scaffolded DNA origami. Nature Methods. 8: 221-9. PMID 21358626 DOI: 10.1038/Nmeth.1570  0.701
2011 Wang L, Castro CE, Boyce MC. Growth strain-induced wrinkled membrane morphology of white blood cells Soft Matter. 7: 11319-11324. DOI: 10.1039/C1Sm06637D  0.58
2011 Castro CE, Dietz H. Expanding the Scope of Single Molecule FRET with DNA Origami Biophysical Journal. 100: 368a. DOI: 10.1016/J.Bpj.2010.12.2196  0.684
2010 Tam JM, Castro CE, Heath RJ, Cardenas ML, Xavier RJ, Lang MJ, Vyas JM. Control and manipulation of pathogens with an optical trap for live cell imaging of intercellular interactions. Plos One. 5: e15215. PMID 21217821 DOI: 10.1371/Journal.Pone.0015215  0.589
2010 Dong J, Castro CE, Boyce MC, Lang MJ, Lindquist S. Optical trapping with high forces reveals unexpected behaviors of prion fibrils Nature Structural and Molecular Biology. 17: 1422-1430. PMID 21113168 DOI: 10.1038/Nsmb.1954  0.668
2010 Lee H, Castro CE, Shin Y, Kamm RD, Lang MJ. Active Stochastic Microrheology using Optical Tweezers Biophysical Journal. 98: 592a. DOI: 10.1016/J.Bpj.2009.12.3221  0.618
2010 Castro CE, Dong J, Boyce MC, Lindquist S, Lang MJ. Physical Properties of Yeast Prion Proteins Studied with Optical Tweezers Biophysical Journal. 98: 424a. DOI: 10.1016/J.Bpj.2009.12.2296  0.665
2009 Kim ST, Takeuchi K, Sun ZY, Touma M, Castro CE, Fahmy A, Lang MJ, Wagner G, Reinherz EL. The alphabeta T cell receptor is an anisotropic mechanosensor. The Journal of Biological Chemistry. 284: 31028-37. PMID 19755427 DOI: 10.1074/Jbc.M109.052712  0.567
2009 Castro CE, Hu C, Ploegh H, Boyce M, Lang M. Membrane Mechanics of B Lymphocyte Activation Biophysical Journal. 96: 627a. DOI: 10.1016/J.Bpj.2008.12.3316  0.524
2009 Castro CE, Dong J, Boyce M, Lindquist S, Lang M. Probing Structure and Mechanics of Yeast Prion Proteins with Optical Tweezers Biophysical Journal. 96: 38a-39a. DOI: 10.1016/J.Bpj.2008.12.093  0.516
2007 Brau RR, Ferrer JM, Lee H, Castro CE, Tam BK, Tarsa PB, Matsudaira P, Boyce MC, Kamm RD, Lang MJ. Passive and active microrheology with optical tweezers Journal of Optics a: Pure and Applied Optics. 9: S103-S112. DOI: 10.1088/1464-4258/9/8/S01  0.661
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