☰

Yuan He - Publications

Affiliations: 
Northwestern University, Evanston, IL 
Area:
transcription, DNA repair
Tree Info Similar researchers PubMed Report error

32 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Patel AB, He Y, Radhakrishnan I. Histone acetylation and deacetylation - Mechanistic insights from structural biology. Gene. 890: 147798. PMID 37726026 DOI: 10.1016/j.gene.2023.147798  0.631
2023 Patel AB, Qing J, Tam KH, Zaman S, Luiso M, Radhakrishnan I, He Y. Cryo-EM structure of the Saccharomyces cerevisiae Rpd3L histone deacetylase complex. Nature Communications. 14: 3061. PMID 37244892 DOI: 10.1038/s41467-023-38687-z  0.667
2022 Reyes AA, Fishbain S, He Y. Structural and functional analysis of the SET3 histone deacetylase complex. Acta Crystallographica. Section F, Structural Biology Communications. 78: 113-118. PMID 35234136 DOI: 10.1107/S2053230X22000553  0.325
2021 Reyes AA, Marcum RD, He Y. Structure and Function of ATP-dependent Chromatin Remodeling Complexes. Journal of Molecular Biology. 166929. PMID 33711345 DOI: 10.1016/j.jmb.2021.166929  0.32
2020 Mashtalir N, Suzuki H, Farrell DP, Sankar A, Luo J, Filipovski M, D'Avino AR, St Pierre R, Valencia AM, Onikubo T, Roeder RG, Han Y, He Y, Ranish JA, DiMaio F, et al. A Structural Model of the Endogenous Human BAF Complex Informs Disease Mechanisms. Cell. PMID 33053319 DOI: 10.1016/j.cell.2020.09.051  0.331
2020 Marcum RD, Reyes AA, He Y. Structural Insights into the Evolutionarily Conserved BAF Chromatin Remodeling Complex. Biology. 9. PMID 32629987 DOI: 10.3390/Biology9070146  0.406
2020 Han Y, Reyes AA, Malik S, He Y. Cryo-EM structure of SWI/SNF complex bound to a nucleosome. Nature. 579: 452-455. PMID 32188938 DOI: 10.1038/S41586-020-2087-1  0.476
2020 Abdella R, Aggarwal M, Okura T, Lamb RA, He Y. Structure of a paramyxovirus polymerase complex reveals a unique methyltransferase-CTD conformation. Proceedings of the National Academy of Sciences of the United States of America. PMID 32075920 DOI: 10.1073/Pnas.1919837117  0.359
2019 Yan C, Dodd T, He Y, Tainer JA, Tsutakawa SE, Ivanov I. Transcription preinitiation complex structure and dynamics provide insight into genetic diseases. Nature Structural & Molecular Biology. PMID 31110295 DOI: 10.1038/s41594-019-0220-3  0.302
2019 Yan C, Dodd T, He Y, Tainer JA, Tsutakawa SE, Ivanov I. Transcription preinitiation complex structure and dynamics provide insight into genetic diseases. Nature Structural & Molecular Biology. 26: 397-406. DOI: 10.2210/Pdb6O9M/Pdb  0.427
2019 Yan C, Todd T, He Y, Tsutakawa SE, Ivanov I, Tainer JA. Transcription pre-initiation complex with TFIIH reveals transcription-ready repair-regulated helicase machine from combined cryo-EM and crystallography datasets Acta Crystallographica Section a Foundations and Advances. 75: a161-a161. DOI: 10.1107/S0108767319098398  0.377
2018 Han Y, Yan C, Fishbain S, Ivanov I, He Y. Structural visualization of RNA polymerase III transcription machineries. Cell Discovery. 4: 40. PMID 30083386 DOI: 10.1038/s41421-018-0044-z  0.312
2018 Han Y, Yan C, Fishbain S, Ivanov I, He Y. Structural visualization of RNA polymerase III transcription machineries. Cell Discovery. 4: 40-40. DOI: 10.2210/Pdb6Cnb/Pdb  0.424
2018 Yan C, He Y, Nogales E, Ivanov I. Electron Microscopy and Integrative Modeling Shed Light on the Mechanisms of Transcription Initiation Biophysical Journal. 114: 246a. DOI: 10.1016/J.Bpj.2017.11.1368  0.485
2017 Jackobel AJ, Han Y, He Y, Knutson BA. Breaking the mold: structures of the RNA polymerase I transcription complex reveal a new path for initiation. Transcription. 1-15. PMID 29264963 DOI: 10.1080/21541264.2017.1416268  0.327
2017 Han Y, Yan C, Nguyen THD, Jackobel AJ, Ivanov I, Knutson BA, He Y. Structural mechanism of ATP-independent transcription initiation by RNA polymerase I. Elife. 6. PMID 28623663 DOI: 10.7554/Elife.27414  0.436
2017 Nogales E, Louder RK, He Y. Structural Insights into the Eukaryotic Transcription Initiation Machinery. Annual Review of Biophysics. 46: 59-83. PMID 28532216 DOI: 10.1146/Annurev-Biophys-070816-033751  0.613
2017 Han Y, Yan C, Nguyen THD, Jackobel AJ, Ivanov I, Knutson BA, He Y. Author response: Structural mechanism of ATP-independent transcription initiation by RNA polymerase I Elife. DOI: 10.7554/Elife.27414.025  0.323
2016 Nogales E, Louder RK, He Y. Cryo-EM in the study of challenging systems: the human transcription pre-initiation complex. Current Opinion in Structural Biology. 40: 120-127. PMID 27689812 DOI: 10.1016/J.Sbi.2016.09.009  0.59
2016 Han Y, He Y. Eukaryotic transcription initiation machinery visualized at molecular level. Transcription. 0. PMID 27658022 DOI: 10.1080/21541264.2016.1237150  0.31
2016 He Y, Yan C, Fang J, Inouye C, Tjian R, Ivanov I, Nogales E. Near-atomic resolution visualization of human transcription promoter opening. Nature. 533: 359-65. PMID 27193682 DOI: 10.1107/S0108767317097483  0.591
2016 Louder RK, He Y, López-Blanco JR, Fang J, Chacón P, Nogales E. Corrigendum: Structure of promoter-bound TFIID and model of human pre-initiation complex assembly. Nature. PMID 27096372 DOI: 10.1038/Nature17984  0.518
2016 Louder RK, He Y, López-Blanco JR, Fang J, Chacón P, Nogales E. Structure of promoter-bound TFIID and model of human pre-initiation complex assembly. Nature. PMID 27007846 DOI: 10.1038/Nature17394  0.618
2015 Zhang ET, He Y, Grob P, Fong YW, Nogales E, Tjian R. Architecture of the human XPC DNA repair and stem cell coactivator complex. Proceedings of the National Academy of Sciences of the United States of America. 112: 14817-22. PMID 26627236 DOI: 10.1073/Pnas.1520104112  0.605
2013 He Y, Fang J, Taatjes DJ, Nogales E. Structural visualization of key steps in human transcription initiation. Nature. 495: 481-6. PMID 23446344 DOI: 10.1038/Nature11991  0.604
2011 Xie T, He Y, Korkeamaki H, Zhang Y, Imhoff R, Lohi O, Radhakrishnan I. Structure of the 30-kDa Sin3-associated protein (SAP30) in complex with the mammalian Sin3A corepressor and its role in nucleic acid binding. The Journal of Biological Chemistry. 286: 27814-24. PMID 21676866 DOI: 10.1074/Jbc.M111.252494  0.689
2011 Xie T, He Y, Korkeamaki H, Zhang Y, Imhoff R, Lohi O, Radhakrishnan I. solution structure of the mSin3A PAH3-SAP30 SID complex Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.2210/Pdb2Ld7/Pdb  0.651
2009 He Y, Imhoff R, Sahu A, Radhakrishnan I. Solution structure of a novel zinc finger motif in the SAP30 polypeptide of the Sin3 corepressor complex and its potential role in nucleic acid recognition. Nucleic Acids Research. 37: 2142-52. PMID 19223330 DOI: 10.1093/Nar/Gkp051  0.698
2009 Radhakrishnan I, He Y, Imhoff R, Sahu A. Solution Structure of the SAP30 zinc finger motif Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.2210/Pdb2Kdp/Pdb  0.625
2008 He Y, Radhakrishnan I. Solution NMR studies of apo-mSin3A and -mSin3B reveal that the PAH1 and PAH2 domains are structurally independent. Protein Science : a Publication of the Protein Society. 17: 171-5. PMID 18042683 DOI: 10.1110/Ps.073097308  0.64
2007 He Y, Hicke L, Radhakrishnan I. Structural basis for ubiquitin recognition by SH3 domains. Journal of Molecular Biology. 373: 190-6. PMID 17765920 DOI: 10.1016/J.Jmb.2007.07.074  0.641
2007 Stamenova SD, French ME, He Y, Francis SA, Kramer ZB, Hicke L. Ubiquitin Binds to and Regulates a Subset of SH3 Domains Molecular Cell. 25: 273-284. PMID 17244534 DOI: 10.1016/J.Molcel.2006.12.016  0.34
Show low-probability matches.