Year |
Citation |
Score |
2020 |
Lü J, Long Q, Zhao Z, Chen L, He W, Hong J, Liu K, Wang Y, Pang X, Deng Z, Tao M. Engineering the Erythromycin-Producing Strain HOE107 for the Heterologous Production of Polyketide Antibiotics. Frontiers in Microbiology. 11: 593217. PMID 33363524 DOI: 10.3389/fmicb.2020.593217 |
0.301 |
|
2020 |
Hu X, Li X, Sheng Y, Wang H, Li X, Ou Y, Deng Z, Bai L, Kang Q. -Aminophenylalanine Involved in the Biosynthesis of Antitumor Dnacin B1 for Quinone Moiety Formation. Molecules (Basel, Switzerland). 25. PMID 32932689 DOI: 10.3390/Molecules25184186 |
0.395 |
|
2020 |
Sun G, Hu C, Mei Q, Luo M, Chen X, Li Z, Liu Y, Deng Z, Zhang Z, Sun Y. Uncovering the cytochrome P450-catalyzed methylenedioxy bridge formation in streptovaricins biosynthesis. Nature Communications. 11: 4501. PMID 32908132 DOI: 10.1038/S41467-020-18336-5 |
0.32 |
|
2020 |
Zhai G, Wang W, Xu W, Sun G, Hu C, Wu X, Cong Z, Deng L, Shi Y, Leadlay PF, Song H, Hong K, Deng Z, Sun Y. Cross-module Enoylreduction in the Azalomycin F Polyketide Synthase. Angewandte Chemie (International Ed. in English). PMID 32865309 DOI: 10.1002/Anie.202011357 |
0.308 |
|
2020 |
Huang Q, Li J, Shi T, Liang J, Wang Z, Bai L, Deng Z, Zhao YL. The defense mechanism of phosphorothioated DNA under peroxynitrite-mediated oxidative stress. Acs Chemical Biology. PMID 32816442 DOI: 10.1021/Acschembio.0C00591 |
0.309 |
|
2020 |
Ou Y, Sheng Y, Hu X, Leng D, Huang J, Hu Z, Bai L, Deng Z, Kang Q, Wu Y. sp. nov., a new actinobacterium isolated from Moq. rhizosphere. International Journal of Systematic and Evolutionary Microbiology. PMID 32790600 DOI: 10.1099/Ijsem.0.004377 |
0.344 |
|
2020 |
He H, Bian G, Herbst-Gervasoni CJ, Mori T, Shinsky SA, Hou A, Mu X, Huang M, Cheng S, Deng Z, Christianson DW, Abe I, Liu T. Discovery of the cryptic function of terpene cyclases as aromatic prenyltransferases. Nature Communications. 11: 3958. PMID 32769971 DOI: 10.1038/S41467-020-17642-2 |
0.312 |
|
2020 |
Luo M, Tang L, Dong Y, Huang H, Deng Z, Sun Y. Antibacterial natural products lobophorin L and M from the marine-derived sp. 4506. Natural Product Research. 1-7. PMID 32713197 DOI: 10.1080/14786419.2020.1797730 |
0.31 |
|
2020 |
Kong L, Wang Q, Deng Z, You D. Characterization of a FAD-dependent halogenase XanH and engineering construction of multifunctional fusion halogenases. Applied and Environmental Microbiology. PMID 32651204 DOI: 10.1128/Aem.01225-20 |
0.364 |
|
2020 |
Kong L, Wang Q, Yang W, Shen J, Li Y, Zheng X, Wang L, Chu Y, Deng Z, Chooi YH, You D. Three recently diverging duplicated methyltransferases exhibit substrate-dependent regioselectivity essential for xantholipin biosynthesis. Acs Chemical Biology. PMID 32649177 DOI: 10.1021/Acschembio.0C00296 |
0.389 |
|
2020 |
Tao M, Xu M, Zhang F, Cheng Z, Bashiri G, Wang J, Hong J, Wang Y, Xu L, Chen X, Huang SX, Lin S, Deng Z. Functional genome mining reveals a novel class V lanthipeptide containing a D-amino acid introduced by an F420H2-dependent reductase. Angewandte Chemie (International Ed. in English). PMID 32648341 DOI: 10.1002/Anie.202008035 |
0.351 |
|
2020 |
Yang W, Kong L, Wang Q, Deng Z, You D. Metabolic engineering of a methyltransferase for production of drug precursors demecycline and demeclocycline in . Synthetic and Systems Biotechnology. 5: 121-130. PMID 32637665 DOI: 10.1016/J.Synbio.2020.06.001 |
0.357 |
|
2020 |
Tong Y, Deng Z. An aurora of natural products-based drug discovery is coming. Synthetic and Systems Biotechnology. 5: 92-96. PMID 32537523 DOI: 10.1016/J.Synbio.2020.05.003 |
0.303 |
|
2020 |
Wu X, Cao B, Aquino P, Chiu TP, Chen C, Jiang S, Deng Z, Chen S, Rohs R, Wang L, Galagan JE, Dedon PC. Epigenetic competition reveals density-dependent regulation and target site plasticity of phosphorothioate epigenetics in bacteria. Proceedings of the National Academy of Sciences of the United States of America. PMID 32518115 DOI: 10.1073/Pnas.2002933117 |
0.314 |
|
2020 |
Liu L, Jiang S, Xing M, Chen C, Lai C, Li N, Liu G, Wu D, Gao H, Hong L, Tan P, Chen S, Deng Z, Wu G, Wang L. Structural Analysis of an l-Cysteine Desulfurase from an Ssp DNA Phosphorothioation System. Mbio. 11. PMID 32345643 DOI: 10.1128/Mbio.00488-20 |
0.339 |
|
2020 |
Li S, Liu Q, Zhong Z, Deng Z, Sun Y. Exploration of Hygromycin B Biosynthesis Utilizing CRISPR-Cas9-Associated Base Editing. Acs Chemical Biology. PMID 32275383 DOI: 10.1021/Acschembio.0C00071 |
0.369 |
|
2020 |
Zhao Q, Luo Y, Zhang X, Kang Q, Zhang D, Zhang L, Bai L, Deng Z. A severe leakage of intermediates to shunt products in acarbose biosynthesis. Nature Communications. 11: 1468. PMID 32193369 DOI: 10.1038/S41467-020-15234-8 |
0.341 |
|
2020 |
Yang L, Zhu J, Sun C, Deng Z, Qu X. Biosynthesis of plant tetrahydroisoquinoline alkaloids through an imine reductase route. Chemical Science. 11: 364-371. PMID 32190259 DOI: 10.1039/C9Sc03773J |
0.317 |
|
2020 |
Siemon T, Wang Z, Bian G, Seitz T, Ye Z, Lu Y, Cheng S, Ding Y, Huang Y, Deng Z, Liu T, Christmann M. Semisynthesis of Plant-Derived Englerin A Enabled by Microbe Engineering of Guaia-6,10(14)-diene as Building Block. Journal of the American Chemical Society. PMID 31999448 DOI: 10.1021/Jacs.9B12940 |
0.315 |
|
2020 |
Sheng Y, Ou Y, Hu X, Deng Z, Bai L, Kang Q. Generation of tetramycin B derivative with improved pharmacological property based on pathway engineering. Applied Microbiology and Biotechnology. PMID 31989221 DOI: 10.1007/S00253-020-10391-8 |
0.375 |
|
2020 |
Song H, Rao C, Deng Z, Yi Y, Naismith JH. The biosynthetic pathway of the benzoxazole in nataxazole proceeds via an unstable ester and has synthetic utility. Angewandte Chemie (International Ed. in English). PMID 31903677 DOI: 10.1002/Anie.201915685 |
0.351 |
|
2019 |
Zhao Y, Tian J, Zheng G, Chen J, Sun C, Yang Z, Zimin AA, Jiang W, Deng Z, Wang Z, Lu Y. Multiplex genome editing using a dCas9-cytidine deaminase fusion in Streptomyces. Science China. Life Sciences. PMID 31872379 DOI: 10.1007/S11427-019-1559-Y |
0.365 |
|
2019 |
Liu R, Fang F, An Z, Huang R, Wang Y, Sun X, Fu S, Fu A, Deng Z, Liu T. Genomics-driven discovery of the biosynthetic gene cluster of maduramicin and its overproduction in Actinomadura sp. J1-007. Journal of Industrial Microbiology & Biotechnology. PMID 31853778 DOI: 10.1007/S10295-019-02256-5 |
0.403 |
|
2019 |
Xiong W, Yin C, Peng W, Deng Z, Lin S, Liang R. Characterization of an 17β-estradiol-degrading bacterium Stenotrophomonas maltophilia SJTL3 tolerant to adverse environmental factors. Applied Microbiology and Biotechnology. PMID 31834439 DOI: 10.1007/S00253-019-10281-8 |
0.321 |
|
2019 |
Ma L, Sun S, Yuan Z, Deng Z, Tang Y, Yu Y. Three putative DNA replication/repair elements encoding genes confer self-resistance to distamycin in Streptomyces netropsis. Acta Biochimica Et Biophysica Sinica. PMID 31833535 DOI: 10.1093/Abbs/Gmz133 |
0.381 |
|
2019 |
Liu X, Hua K, Liu D, Wu ZL, Wang Y, Zhang H, Deng Z, Pfeifer BA, Jiang M. Heterologous Biosynthesis of Type II Polyketide Products Using E. coli. Acs Chemical Biology. PMID 31825590 DOI: 10.1021/Acschembio.9B00827 |
0.356 |
|
2019 |
Kong L, Liu J, Zheng X, Deng Z, You D. CtcS, a MarR family regulator, regulates chlortetracycline biosynthesis. Bmc Microbiology. 19: 279. PMID 31823730 DOI: 10.1186/S12866-019-1670-9 |
0.323 |
|
2019 |
Kong L, Xu G, Liu X, Wang J, Tang Z, Cai YS, Shen K, Tao W, Zheng Y, Deng Z, Price NPJ, Chen W. Divergent Biosynthesis of C-Nucleoside Minimycin and Indigoidine in Bacteria. Iscience. 22: 430-440. PMID 31816530 DOI: 10.1016/J.Isci.2019.11.037 |
0.367 |
|
2019 |
Zhang F, Ji H, Ali I, Deng Z, Bai L, Zheng J. Structural and Biochemical insights to the Recruitment of Acyl Carrier Protein-linked Extender Units in Ansamitocin Biosynthesis. Chembiochem : a European Journal of Chemical Biology. PMID 31777147 DOI: 10.1002/Cbic.201900628 |
0.314 |
|
2019 |
Pu T, Mei Z, Zhang W, Liang WJ, Zhou X, Liang J, Deng Z, Wang Z. An in vitro DNA Phosphorothioate Modification Reaction. Molecular Microbiology. PMID 31749226 DOI: 10.1111/Mmi.14430 |
0.302 |
|
2019 |
Liu Y, Su L, Fang Q, Tabudravu J, Yang X, Rickaby K, Trembleau L, Kyeremeh K, Deng Z, Deng H, Yu Y. Enzymatic reconstitution and biosynthetic investigation of the bacterial carbazole neocarazostatin A. The Journal of Organic Chemistry. PMID 31729221 DOI: 10.1021/Acs.Joc.9B02688 |
0.356 |
|
2019 |
Chang Y, Chai B, Ding Y, He M, Zheng L, Teng Y, Deng Z, Yu Y, Liu T. Overproduction of gentamicin B in industrial strain CCTCC M 2018898 by cloning of the missing genes and . Metabolic Engineering Communications. 9: e00096. PMID 31720212 DOI: 10.1016/J.Mec.2019.E00096 |
0.356 |
|
2019 |
Long Q, Jeffries DE, Lin S, Chen X, He W, Wang Y, Deng Z, Lindsley CW, Tao M. RedH and PigC Catalyze the Biosynthesis of Hybrubins via Phosphorylation of 4'-Methoxy-2,2'-Bipyrrole-5'-Carbaldehyde. Applied and Environmental Microbiology. PMID 31704680 DOI: 10.1128/Aem.02331-19 |
0.315 |
|
2019 |
Zhang M, Zhang P, Xu G, Zhou W, Gao Y, Gong R, Cai YS, Cong H, Deng Z, Price NPJ, Mao X, Chen W. Comparative investigation into formycin A and pyrazofurin A biosynthesis reveals branch pathways for the construction of -nucleoside scaffolds. Applied and Environmental Microbiology. PMID 31676476 DOI: 10.1128/Aem.01971-19 |
0.4 |
|
2019 |
Kang W, Ma T, Liu M, Qu J, Liu Z, Zhang H, Shi B, Fu S, Ma J, Lai LTF, He S, Qu J, Wing-Ngor Au S, Ho Kang B, Yu Lau WC, ... Deng Z, et al. Modular enzyme assembly for enhanced cascade biocatalysis and metabolic flux. Nature Communications. 10: 4248. PMID 31534134 DOI: 10.1038/S41467-019-12247-W |
0.341 |
|
2019 |
Shi B, Ma T, Ye Z, Li X, Huang Y, Zhou Z, Ding Y, Deng Z, Liu T. Systematic metabolic engineering of Saccharomyces cerevisiae for lycopene overproduction. Journal of Agricultural and Food Chemistry. PMID 31532654 DOI: 10.1021/Acs.Jafc.9B04519 |
0.358 |
|
2019 |
Liu Q, Fan W, Zhao Y, Deng Z, Feng Y. Probing and Engineering the Fatty Acyl Substrate Selectivity of Starter Condensation Domains of Nonribosomal Peptide Synthetases in Lipopeptide Biosynthesis. Biotechnology Journal. e1900175. PMID 31520458 DOI: 10.1002/Biot.201900175 |
0.322 |
|
2019 |
Yuan W, Lv S, Chen L, Zhao Y, Deng Z, Hong K. Production of sesterterpene ophiobolin by a bifunctional terpene synthase in Escherichia coli. Applied Microbiology and Biotechnology. PMID 31515597 DOI: 10.1007/S00253-019-10103-X |
0.393 |
|
2019 |
Sun X, Cai YS, Yuan Y, Bian G, Ye Z, Deng Z, Liu T. Genome mining in J1-030: discovery and identification of novel sesquiterpene synthase and its products. Beilstein Journal of Organic Chemistry. 15: 2052-2058. PMID 31501673 DOI: 10.3762/Bjoc.15.202 |
0.334 |
|
2019 |
Deng Q, Liu Y, Chen L, Xu M, Naowarojna N, Lee N, Chen L, Zhu D, Hong X, Deng Z, Liu P, Zhao C. Biochemical Characterization of a Multifunctional Mononuclear Nonheme Iron Enzyme (PtlD) in Neopentalenoketolactone Biosynthesis. Organic Letters. PMID 31490082 DOI: 10.1021/Acs.Orglett.9B02872 |
0.415 |
|
2019 |
Tao W, Chen L, Zhao C, Wu J, Yan D, Deng Z, Sun Y. In vitro Packaging Mediated One-Step Targeted Cloning of Natural Product Pathway. Acs Synthetic Biology. PMID 31487454 DOI: 10.1021/Acssynbio.9B00248 |
0.421 |
|
2019 |
Qian H, Yu H, Li P, Zhu E, Yao Q, Tai C, Deng Z, Gerdes K, He X, Gan J, Ou HY. Toxin-antitoxin operon kacAT of Klebsiella pneumoniae is regulated by conditional cooperativity via a W-shaped KacA-KacT complex. Nucleic Acids Research. PMID 31260525 DOI: 10.1093/Nar/Gkz563 |
0.317 |
|
2019 |
Zhang F, Shi T, Ji H, Ali I, Huang S, Deng Z, Min Q, Bai L, Zhao YL, Zheng J. Structural Insights into Substrate Specificity of Acyltransferases from Salinomycin Polyketide Synthase. Biochemistry. PMID 31199122 DOI: 10.1021/acs.biochem.9b00305 |
0.321 |
|
2019 |
Hu H, Wang L, Wang W, Wu G, Tao F, Xu P, Deng Z, Tang H. Regulatory Mechanism of Nicotine Degradation in . Mbio. 10. PMID 31164460 DOI: 10.1128/Mbio.00602-19 |
0.304 |
|
2019 |
Zhang W, Zhou L, Li C, Deng Z, Qu X. Rational engineering acyltransferase domain of modular polyketide synthase for expanding substrate specificity. Methods in Enzymology. 622: 271-292. PMID 31155056 DOI: 10.1016/Bs.Mie.2019.02.016 |
0.302 |
|
2019 |
Mo J, Wang S, Zhang W, Li C, Deng Z, Zhang L, Qu X. Efficient editing DNA regions with high sequence identity in actinomycetal genomes by a CRISPR-Cas9 system. Synthetic and Systems Biotechnology. 4: 86-91. PMID 30891508 DOI: 10.1016/J.Synbio.2019.02.004 |
0.395 |
|
2019 |
Qiao Y, Yan J, Jia J, Xue J, Qu X, Hu Y, Deng Z, Bi H, Zhu D. Characterization of the Biosynthetic Gene Cluster for the Antibiotic Armeniaspirols in Streptomyces armeniacus. Journal of Natural Products. PMID 30747534 DOI: 10.1021/Acs.Jnatprod.8B00753 |
0.356 |
|
2019 |
Pu T, Liang J, Mei Z, Yang Y, Wang J, Zhang W, Liang WJ, Zhou X, Deng Z, Wang Z. Phosphorothioated DNA is shielded from oxidative damage. Applied and Environmental Microbiology. PMID 30737351 DOI: 10.1128/Aem.00104-19 |
0.326 |
|
2019 |
Xu Z, Li Y, Wang Y, Deng Z, Tao M. Genome-wide Mutagenesis Links Multiple Metabolic Pathways with Actinorhodin Production in . Applied and Environmental Microbiology. PMID 30709825 DOI: 10.1128/Aem.03005-18 |
0.41 |
|
2019 |
Shen J, Kong L, Li Y, Zheng X, Wang Q, Yang W, Deng Z, You D. A LuxR family transcriptional regulator AniF promotes the production of anisomycin and its derivatives in var. beijingensis. Synthetic and Systems Biotechnology. 4: 40-48. PMID 30656223 DOI: 10.1016/J.Synbio.2018.12.004 |
0.393 |
|
2019 |
Deng Q, Xiao L, Liu Y, Zhang L, Deng Z, Zhao C. industrial strain as cell factory for Ivermectin B1a production. Synthetic and Systems Biotechnology. 4: 34-39. PMID 30623120 DOI: 10.1016/J.Synbio.2018.12.003 |
0.375 |
|
2019 |
Chi H, Wang X, Shao Y, Qin Y, Deng Z, Wang L, Chen S. Engineering and modification of microbial chassis for systems and synthetic biology. Synthetic and Systems Biotechnology. 4: 25-33. PMID 30560208 DOI: 10.1016/J.Synbio.2018.12.001 |
0.304 |
|
2019 |
Li Y, Kong L, Shen J, Wang Q, Liu Q, Yang W, Deng Z, You D. Characterization of the positive SARP family regulator PieR for improving piericidin A1 production in var. Hangzhouwanensis. Synthetic and Systems Biotechnology. 4: 16-24. PMID 30560207 DOI: 10.1016/J.Synbio.2018.12.002 |
0.317 |
|
2019 |
Chen L, Naowarojna N, Chen B, Xu M, Quill M, Wang J, Deng Z, Zhao C, Liu P. Mechanistic Studies of a Nonheme Iron Enzyme OvoA in Ovothiol Biosynthesis Using a Tyrosine Analogue, 2-Amino-3-(4-hydroxy-3-(methoxyl) phenyl) Propanoic Acid (MeOTyr) Acs Catalysis. 9: 253-258. DOI: 10.1021/Acscatal.8B03903 |
0.35 |
|
2018 |
Peng Q, Gao G, Lü J, Long Q, Chen X, Zhang F, Xu M, Liu K, Wang Y, Deng Z, Li Z, Tao M. Engineered Strains for Optimal Identification and Expression of Cryptic Biosynthetic Gene Clusters. Frontiers in Microbiology. 9: 3042. PMID 30619133 DOI: 10.3389/Fmicb.2018.03042 |
0.383 |
|
2018 |
Xia S, Chen J, Liu L, Wei Y, Deng Z, Wang L, Chen S. Tight control of genomic phosphorothioate modification by the ATP-modulated autoregulation and reusability of DndB. Molecular Microbiology. PMID 30552823 DOI: 10.1111/Mmi.14186 |
0.301 |
|
2018 |
Yu S, Zheng C, Zhou F, Baillie DL, Rose AM, Deng Z, Chu JS. Genomic identification and functional analysis of essential genes in Caenorhabditis elegans. Bmc Genomics. 19: 871. PMID 30514206 DOI: 10.1186/S12864-018-5251-3 |
0.334 |
|
2018 |
Yuan Y, Litzenburger M, Cheng S, Bian G, Hu B, Yan P, Cai Y, Deng Z, Bernhardt R, Liu T. Sesquiterpenoids Produced by the Combination of Two Sesquiterpene Cyclases with Promiscuous Myxobacterial CYP260B1. Chembiochem : a European Journal of Chemical Biology. PMID 30484946 DOI: 10.1002/Cbic.201800670 |
0.308 |
|
2018 |
Wang X, Kong D, Huang T, Deng Z, Lin S. StnK2 catalysing a Pictet-Spengler reaction involved in the biosynthesis of the antitumor reagent streptonigrin. Organic & Biomolecular Chemistry. PMID 30483694 DOI: 10.1039/C8Ob02710B |
0.32 |
|
2018 |
Ma T, Shi B, Ye Z, Li X, Liu M, Chen Y, Xia J, Nielsen J, Deng Z, Liu T. Lipid engineering combined with systematic metabolic engineering of Saccharomyces cerevisiae for high-yield production of lycopene. Metabolic Engineering. PMID 30471360 DOI: 10.1016/J.Ymben.2018.11.009 |
0.341 |
|
2018 |
Wang L, Jiang S, Deng Z, Dedon PC, Chen S. DNA phosphorothioate modification - a new multi-functional epigenetic system in bacteria. Fems Microbiology Reviews. PMID 30289455 DOI: 10.1093/Femsre/Fuy036 |
0.311 |
|
2018 |
Kamjam M, Nopnakorn P, Zhang L, Peng F, Deng Z, Hong K. Streptomyces polaris sp. nov. and Streptomyces septentrionalis sp. nov., isolated from frozen soil. Antonie Van Leeuwenhoek. PMID 30251113 DOI: 10.1007/S10482-018-1166-X |
0.311 |
|
2018 |
Xu G, Kong L, Gong R, Xu L, Gao Y, Jiang M, Cai YS, Hong K, Hu Y, Liu P, Deng Z, Price NPJ, Chen W. Coordinated biosynthesis of the purine nucleoside antibiotics aristeromycin and coformycin in the actinomycetes. Applied and Environmental Microbiology. PMID 30217843 DOI: 10.1128/Aem.01860-18 |
0.388 |
|
2018 |
Huang T, Duan Y, Zou Y, Deng Z, Lin S. NRPS Protein MarQ Catalyzes Flexible Adenylation and Specific S-Methylation. Acs Chemical Biology. PMID 30160473 DOI: 10.1021/Acschembio.8B00364 |
0.349 |
|
2018 |
Tao W, Yang A, Deng Z, Sun Y. CRISPR/Cas9-Based Editing of for Discovery, Characterization, and Production of Natural Products. Frontiers in Microbiology. 9: 1660. PMID 30087666 DOI: 10.3389/Fmicb.2018.01660 |
0.366 |
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2018 |
Zhang J, Li X, Deng Z, Ou HY. Comparative Analysis of CRISPR Loci Found in Streptomyces Genome Sequences. Interdisciplinary Sciences, Computational Life Sciences. PMID 30030786 DOI: 10.1007/S12539-018-0301-8 |
0.321 |
|
2018 |
Duan Y, Liu Y, Huang T, Zou Y, Huang T, Hu K, Deng Z, Lin S. Divergent biosynthesis of indole alkaloids FR900452 and spiro-maremycins. Organic & Biomolecular Chemistry. PMID 30020298 DOI: 10.1039/C8Ob01181H |
0.367 |
|
2018 |
Yan X, Zhang B, Tian W, Dai Q, Zheng X, Hu K, Liu X, Deng Z, Qu X. Puromycin A, B and C, cryptic nucleosides identified from NRRL B-1832 by PPtase-based activation. Synthetic and Systems Biotechnology. 3: 76-80. PMID 29911201 DOI: 10.1016/J.Synbio.2018.02.001 |
0.341 |
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2018 |
Tao H, Zhang Y, Deng Z, Liu T. Strategies for Enhancing the Yield of the Potent Insecticide Spinosad in Actinomycetes. Biotechnology Journal. e1700769. PMID 29897659 DOI: 10.1002/Biot.201700769 |
0.375 |
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2018 |
Li S, Zhang J, Liu Y, Sun G, Deng Z, Sun Y. Direct Genetic and Enzymatic Evidence for Oxidative Cyclization in Hygromycin B Biosynthesis. Acs Chemical Biology. PMID 29878752 DOI: 10.1021/Acschembio.8B00375 |
0.335 |
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2018 |
Liu L, Zhang Y, Jiang D, Du S, Deng Z, Wang L, Chen S. Recent advances in the genomic profiling of bacterial epigenetic modifications. Biotechnology Journal. e1800001. PMID 29878585 DOI: 10.1002/Biot.201800001 |
0.31 |
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2018 |
Zhao Y, Zheng G, Jiang W, Deng Z, Wang Z, Lu Y. CRISPR/dCas9-mediated multiplex gene repression in Streptomyces. Biotechnology Journal. e1800121. PMID 29862648 DOI: 10.1002/Biot.201800121 |
0.385 |
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2018 |
Liu R, Deng Z, Liu T. Streptomyces species: Ideal chassis for natural product discovery and overproduction. Metabolic Engineering. PMID 29852270 DOI: 10.1016/J.Ymben.2018.05.015 |
0.306 |
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2018 |
Li X, Xie Y, Liu M, Tai C, Sun J, Deng Z, Ou HY. oriTfinder: a web-based tool for the identification of origin of transfers in DNA sequences of bacterial mobile genetic elements. Nucleic Acids Research. PMID 29733379 DOI: 10.1093/Nar/Gky352 |
0.362 |
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2018 |
Wu S, Wang L, Gan R, Tong T, Bian H, Li Z, Du S, Deng Z, Chen S. Signature Arsenic Detoxification Pathways in sp. Strain GFAJ-1. Mbio. 9. PMID 29717010 DOI: 10.1128/Mbio.00515-18 |
0.323 |
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2018 |
Gong R, Qi J, Wu P, Cai YS, Ma H, Liu Y, Duan H, Wang M, Deng Z, Price NPJ, Chen W. An ATP-dependent ligase with substrate flexibility involved in assembly of the peptidyl nucleoside antibiotic polyoxin. Applied and Environmental Microbiology. PMID 29703734 DOI: 10.1128/Aem.00501-18 |
0.346 |
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2018 |
Qiao Y, Tong T, Xue J, Lin W, Deng Z, Cheng YQ, Zhu D. Mechanistic studies of DepR in regulating FK228 biosynthesis in Chromobacterium violaceum no. 968. Plos One. 13: e0196173. PMID 29672625 DOI: 10.1371/Journal.Pone.0196173 |
0.376 |
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2018 |
Chen X, Xu M, Lü J, Xu J, Wang Y, Lin S, Deng Z, Tao M. Biosynthesis of Tropolones in spp: Interweaving Biosynthesis and Degradation of Phenylacetic Acid and Hydroxylations on Tropone Ring. Applied and Environmental Microbiology. PMID 29654178 DOI: 10.1128/Aem.00349-18 |
0.423 |
|
2018 |
Wu H, Liang J, Gou L, Wu Q, Liang WJ, Zhou X, Bruce IJ, Deng Z, Wang Z. Recycling of over-activated acyls by a Type II Thioesterase during Calcimycin biosynthesis in NRRL 3882. Applied and Environmental Microbiology. PMID 29654175 DOI: 10.1128/Aem.00587-18 |
0.396 |
|
2018 |
Wu H, Liang J, Wang J, Liang WJ, Gou L, Wu Q, Zhou X, Bruce IJ, Deng Z, Wang Z. Cezomycin is activated by CalC to its ester form for further biosynthesis steps in the production of calcimycin in NRRL 3882. Applied and Environmental Microbiology. PMID 29654174 DOI: 10.1128/Aem.00586-18 |
0.39 |
|
2018 |
Liu C, Yuan M, Xu X, Wang L, Keatinge-Clay AT, Deng Z, Lin S, Zheng J. Substrate-bound Structures of a Ketoreductase from Amphotericin Modular Polyketide Synthase. Journal of Structural Biology. PMID 29626512 DOI: 10.1016/J.Jsb.2018.04.001 |
0.306 |
|
2018 |
Chen L, Naowarojna N, Song H, Wang S, Wang J, Deng Z, Zhao C, Liu P. Use of a tyrosine analog to modulate the two activities of a non-heme iron enzyme OvoA in ovothiol biosynthesis, cysteine oxidation versus oxidative C-S bond formation. Journal of the American Chemical Society. PMID 29544051 DOI: 10.1021/Jacs.7B13628 |
0.366 |
|
2018 |
Tong T, Chen S, Wang L, Tang Y, Ryu JY, Jiang S, Wu X, Chen C, Luo J, Deng Z, Li Z, Lee SY, Chen S. Occurrence, evolution, and functions of DNA phosphorothioate epigenetics in bacteria. Proceedings of the National Academy of Sciences of the United States of America. PMID 29531068 DOI: 10.1073/Pnas.1721916115 |
0.302 |
|
2018 |
Bian G, Hou A, Yuan Y, Hu B, Cheng S, Ye Z, Di Y, Deng Z, Liu T. Metabolic Engineering-Based Rapid Characterization of a Sesquiterpene Cyclase and the Skeletons of Fusariumdiene and Fusagramineol from Fusarium graminearum. Organic Letters. PMID 29513542 DOI: 10.1021/Acs.Orglett.8B00366 |
0.307 |
|
2018 |
Choi SS, Katsuyama Y, Bai L, Deng Z, Ohnishi Y, Kim ES. Genome engineering for microbial natural product discovery. Current Opinion in Microbiology. 45: 53-60. PMID 29510374 DOI: 10.1016/J.Mib.2018.02.007 |
0.344 |
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2018 |
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Zhang Y, Zou Y, Brock NL, Huang T, Lan Y, Wang X, Deng Z, Tang Y, Lin S. Characterization of 2-Oxindole Forming Heme Enzyme MarE, Expanding the Functional Diversity of the Tryptophan Dioxygenase Superfamily. Journal of the American Chemical Society. PMID 28809552 DOI: 10.1021/Jacs.7B05517 |
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Bian G, Deng Z, Liu T. Strategies for terpenoid overproduction and new terpenoid discovery. Current Opinion in Biotechnology. 48: 234-241. PMID 28779606 DOI: 10.1016/J.Copbio.2017.07.002 |
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Yang Y, Xu G, Liang J, He Y, Xiong L, Li H, Bartlett D, Deng Z, Wang Z, Xiao X. DNA Backbone Sulfur-Modification Expands Microbial Growth Range under Multiple Stresses by its anti-oxidation function. Scientific Reports. 7: 3516. PMID 28615635 DOI: 10.1038/S41598-017-02445-1 |
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Zhuang Y, Yang G, Chen X, Liu Q, Zhang X, Deng Z, Feng Y. Biosynthesis of Plant-derived Ginsenoside Rh2 in Yeast via Repurposing a Key Promiscuous Microbial Enzyme. Metabolic Engineering. PMID 28479190 DOI: 10.1016/J.Ymben.2017.04.009 |
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Bian G, Yuan Y, Tao H, Shi X, Zhong X, Han Y, Fu S, Fang C, Deng Z, Liu T. Production of taxadiene by engineering of mevalonate pathway in Escherichia coli and endophytic fungus Alternaria alternata TPF6. Biotechnology Journal. PMID 28217906 DOI: 10.1002/Biot.201600697 |
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Tao H, Zhang Y, Cao X, Deng Z, Liu T. Absolute quantification of proteins in the fatty acid biosynthetic pathway using protein standard absolute quantification. Synthetic and Systems Biotechnology. 1: 150-157. PMID 29062939 DOI: 10.1016/J.Synbio.2016.01.001 |
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Tan GY, Zhu F, Deng Z, Liu T. In vitro reconstitution guide for targeted synthetic metabolism of chemicals, nutraceuticals and drug precursors. Synthetic and Systems Biotechnology. 1: 25-33. PMID 29062924 DOI: 10.1016/J.Synbio.2016.02.003 |
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Chen K, Wu S, Zhu L, Zhang C, Xiang W, Deng Z, Ikeda H, Cane DE, Zhu D. Substitution of a Single Amino Acid Reverses the Regiospecificity of the Baeyer-Villiger Monooxygenase PntE in the Biosynthesis of the Antibiotic Pentalenolactone. Biochemistry. 55: 6696-6704. PMID 27933799 DOI: 10.1021/Acs.Biochem.6B01040 |
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Su L, Lv M, Kyeremeh K, Deng Z, Deng H, Yu Y. A ThDP-dependent enzymatic carboligation reaction involved in Neocarazostatin A tricyclic carbazole formation. Organic & Biomolecular Chemistry. 14: 8679-8684. PMID 27714211 DOI: 10.1039/C6Ob01651K |
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Zhao H, Wang L, Wan D, Qi J, Gong R, Deng Z, Chen W. Characterization of the aurantimycin biosynthetic gene cluster and enhancing its production by manipulating two pathway-specific activators in Streptomyces aurantiacus JA 4570. Microbial Cell Factories. 15: 160. PMID 27655321 DOI: 10.1186/S12934-016-0559-7 |
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Qi J, Wan D, Ma H, Liu Y, Gong R, Qu X, Sun Y, Deng Z, Chen W. Deciphering Carbamoylpolyoxamic Acid Biosynthesis Reveals Unusual Acetylation Cycle Associated with Tandem Reduction and Sequential Hydroxylation. Cell Chemical Biology. 23: 935-944. PMID 27541195 DOI: 10.1016/J.Chembiol.2016.07.011 |
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Li P, Tai C, Deng Z, Gan J, Oggioni MR, Ou HY. Identification and characterization of chromosomal relBE toxin-antitoxin locus in Streptomyces cattleya DSM46488. Scientific Reports. 6: 32047. PMID 27534445 DOI: 10.1038/Srep32047 |
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Li N, Wang H, Li L, Cheng H, Liu D, Cheng H, Deng Z. Integrated Approach To Producing High-Purity Trehalose from Maltose by the Yeast Yarrowia lipolytica Displaying Trehalose Synthase (TreS) on the Cell Surface. Journal of Agricultural and Food Chemistry. PMID 27472444 DOI: 10.1021/Acs.Jafc.6B02175 |
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Bi D, Xie Y, Tai C, Jiang X, Zhang J, Harrison EM, Jia S, Deng Z, Rajakumar K, Ou HY. A Site-Specific Integrative Plasmid Found in Pseudomonas aeruginosa Clinical Isolate HS87 along with A Plasmid Carrying an Aminoglycoside-Resistant Gene. Plos One. 11: e0148367. PMID 26841043 DOI: 10.1371/Journal.Pone.0148367 |
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Yu G, Li L, Liu X, Liu G, Deng Z, Zabriskie MT, Jiang M, He X. The standalone aminopeptidase PepN catalyzes the maturation of blasticidin S from leucylblasticidin S. Scientific Reports. 5: 17641. PMID 26621790 DOI: 10.1038/Srep17641 |
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Ma T, Zhou Y, Li X, Zhu F, Cheng Y, Liu Y, Deng Z, Liu T. Genome mining of astaxanthin biosynthetic genes from Sphingomonas sp. ATCC 55669 for heterologous overproduction in Escherichia coli. Biotechnology Journal. PMID 26580858 DOI: 10.1002/Biot.201400827 |
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Liu Y, Tao W, Wen S, Li Z, Yang A, Deng Z, Sun Y. In Vitro CRISPR/Cas9 System for Efficient Targeted DNA Editing. Mbio. 6. PMID 26556277 DOI: 10.1128/Mbio.01714-15 |
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Lv M, Zhao J, Deng Z, Yu Y. Characterization of the Biosynthetic Gene Cluster for Benzoxazole Antibiotics A33853 Reveals Unusual Assembly Logic. Chemistry & Biology. 22: 1313-24. PMID 26496684 DOI: 10.1016/J.Chembiol.2015.09.005 |
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Zhang L, Li L, Deng Z, Hong K. Micromonospora zhanjiangensis sp. nov., isolated from mangrove forest. International Journal of Systematic and Evolutionary Microbiology. PMID 26446196 DOI: 10.1099/Ijsem.0.000667 |
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Zeng H, Wen S, Xu W, He Z, Zhai G, Liu Y, Deng Z, Sun Y. Highly efficient editing of the actinorhodin polyketide chain length factor gene in Streptomyces coelicolor M145 using CRISPR/Cas9-CodA(sm) combined system. Applied Microbiology and Biotechnology. PMID 26318449 DOI: 10.1007/S00253-015-6931-4 |
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Chen L, Li P, Deng Z, Zhao C. Ornithine Transcarbamylase ArgK Plays a Dual role for the Self-defense of Phaseolotoxin Producing Pseudomonas syringae pv. phaseolicola. Scientific Reports. 5: 12892. PMID 26256666 DOI: 10.1038/Srep12892 |
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Bi D, Jiang X, Sheng ZK, Ngmenterebo D, Tai C, Wang M, Deng Z, Rajakumar K, Ou HY. Mapping the resistance-associated mobilome of a carbapenem-resistant Klebsiella pneumoniae strain reveals insights into factors shaping these regions and facilitates generation of a 'resistance-disarmed' model organism. The Journal of Antimicrobial Chemotherapy. 70: 2770-4. PMID 26169555 DOI: 10.1093/Jac/Dkv204 |
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Tao H, Guo D, Zhang Y, Deng Z, Liu T. Metabolic engineering of microbes for branched-chain biodiesel production with low-temperature property. Biotechnology For Biofuels. 8: 92. PMID 26120362 DOI: 10.1186/S13068-015-0270-7 |
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Huang S, Tong MH, Qin Z, Deng Z, Deng H, Yu Y. Identification and characterization of the biosynthetic gene cluster of thiolutin, a tumor angiogenesis inhibitor, in Saccharothrix algeriensis NRRL B-24137. Anti-Cancer Agents in Medicinal Chemistry. 15: 277-84. PMID 25353334 DOI: 10.2174/1871520614666141027145200 |
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Zhu D, Wang Y, Zhang M, Ikeda H, Deng Z, Cane DE. Product-mediated regulation of pentalenolactone biosynthesis in Streptomyces species by the MarR/SlyA family activators PenR and PntR. Journal of Bacteriology. 195: 1255-66. PMID 23316039 DOI: 10.1128/Jb.02079-12 |
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Tang YL, Lin HP, Xie QY, Li L, Peng F, Deng Z, Hong K. Actinoallomurus acanthiterrae sp. nov., an actinomycete isolated from rhizosphere soil of the mangrove plant Acanthus ilicifolius. International Journal of Systematic and Evolutionary Microbiology. 63: 1874-9. PMID 23002049 DOI: 10.1099/Ijs.0.043380-0 |
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Wu J, Li L, Deng Z, Zabriskie TM, He X. Analysis of the mildiomycin biosynthesis gene cluster in Streptoverticillum remofaciens ZJU5119 and characterization of MilC, a hydroxymethyl cytosyl-glucuronic acid synthase. Chembiochem : a European Journal of Chemical Biology. 13: 1613-21. PMID 22753012 DOI: 10.1002/Cbic.201200173 |
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Qiu J, Zhuo Y, Zhu D, Zhou X, Zhang L, Bai L, Deng Z. Overexpression of the ABC transporter AvtAB increases avermectin production in Streptomyces avermitilis. Applied Microbiology and Biotechnology. 92: 337-45. PMID 21713508 DOI: 10.1007/S00253-011-3439-4 |
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He YW, Wu J, Zhou L, Yang F, He YQ, Jiang BL, Bai L, Xu Y, Deng Z, Tang JL, Zhang LH. Xanthomonas campestris diffusible factor is 3-hydroxybenzoic acid and is associated with xanthomonadin biosynthesis, cell viability, antioxidant activity, and systemic invasion. Molecular Plant-Microbe Interactions : Mpmi. 24: 948-57. PMID 21539432 DOI: 10.1094/Mpmi-02-11-0031 |
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Zhao C, Huang T, Chen W, Deng Z. Enhancement of the diversity of polyoxins by a thymine-7-hydroxylase homolog outside the polyoxin biosynthesis gene cluster. Applied and Environmental Microbiology. 76: 7343-7347. PMID 20817795 DOI: 10.1128/Aem.01257-10 |
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Xu T, Yao F, Zhou X, Deng Z, You D. A novel host-specific restriction system associated with DNA backbone S-modification in Salmonella. Nucleic Acids Research. 38: 7133-41. PMID 20627870 DOI: 10.1093/Nar/Gkq610 |
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He Y, Wang Z, Bai L, Liang J, Zhou X, Deng Z. Two pHZ1358-derivative vectors for efficient gene knockout in streptomyces. Journal of Microbiology and Biotechnology. 20: 678-82. PMID 20467238 DOI: 10.4014/Jmb.0910.10031 |
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Zhao C, Coughlin JM, Ju J, Zhu D, Wendt-Pienkowski E, Zhou X, Wang Z, Shen B, Deng Z. Oxazolomycin biosynthesis in Streptomyces albus JA3453 featuring an "acyltransferase-less" type I polyketide synthase that incorporates two distinct extender units. The Journal of Biological Chemistry. 285: 20097-108. PMID 20406823 DOI: 10.1074/Jbc.M109.090092 |
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Gai Z, Wang X, Liu X, Tai C, Tang H, He X, Wu G, Deng Z, Xu P. The genes coding for the conversion of carbazole to catechol are flanked by IS6100 elements in Sphingomonas sp. strain XLDN2-5. Plos One. 5: e10018. PMID 20368802 DOI: 10.1371/Journal.Pone.0010018 |
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He Y, Sun Y, Liu T, Zhou X, Bai L, Deng Z. Cloning of separate meilingmycin biosynthesis gene clusters by use of acyltransferase-ketoreductase didomain PCR amplification. Applied and Environmental Microbiology. 76: 3283-92. PMID 20348291 DOI: 10.1128/Aem.02262-09 |
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2010 |
Chen N, Ou HY, van Aartsen JJ, Jiang X, Li M, Yang Z, Wei Q, Chen X, He X, Deng Z, Rajakumar K, Lu Y. The pheV phenylalanine tRNA gene Klebsiella pneumoniae clinical isolates is an integration hotspot for possible niche-adaptation genomic islands. Current Microbiology. 60: 210-6. PMID 19921332 DOI: 10.1007/S00284-009-9526-4 |
0.357 |
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2010 |
Cheng H, Li Z, Jiang N, Deng Z. Cloning, purification and characterization of an NAD-Dependent D-Arabitol dehydrogenase from acetic acid bacterium, Acetobacter suboxydans. The Protein Journal. 28: 263-72. PMID 19629658 DOI: 10.1007/S10930-009-9191-2 |
0.302 |
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2010 |
Lin J, Bai L, Deng Z, Zhong J. Effect of ammonium in medium on ansamitocin P-3 production by Actinosynnema pretiosum Biotechnology and Bioprocess Engineering. 15: 119-125. DOI: 10.1007/S12257-009-3054-8 |
0.348 |
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2009 |
Li Q, Wang X, Yin G, Gai Z, Tang H, Ma C, Deng Z, Xu P. New metabolites in dibenzofuran cometabolic degradation by a biphenyl-cultivated Pseudomonas putida strain B6-2. Environmental Science & Technology. 43: 8635-42. PMID 20028064 DOI: 10.1021/Es901991D |
0.314 |
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2009 |
Li R, Liu G, Xie Z, He X, Chen W, Deng Z, Tan H. PolY, a transcriptional regulator with ATPase activity, directly activates transcription of polR in polyoxin biosynthesis in Streptomyces cacaoi. Molecular Microbiology. 75: 349-64. PMID 19919670 DOI: 10.1111/J.1365-2958.2009.06968.X |
0.334 |
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2009 |
Xu H, Zhang Y, Yang J, Mahmud T, Bai L, Deng Z. Alternative epimerization in C(7)N-aminocyclitol biosynthesis is catalyzed by ValD, a large protein of the vicinal oxygen chelate superfamily. Chemistry & Biology. 16: 567-76. PMID 19477421 DOI: 10.1016/J.Chembiol.2009.04.006 |
0.316 |
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2009 |
Zhang Y, Bai L, Deng Z. Functional characterization of the first two actinomycete 4-amino-4-deoxychorismate lyase genes. Microbiology. 155: 2450-2459. PMID 19389784 DOI: 10.1099/Mic.0.026336-0 |
0.403 |
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2009 |
Li R, Xie Z, Tian Y, Yang H, Chen W, You D, Liu G, Deng Z, Tan H. polR, a pathway-specific transcriptional regulatory gene, positively controls polyoxin biosynthesis in Streptomyces cacaoi subsp. asoensis. Microbiology (Reading, England). 155: 1819-31. PMID 19383687 DOI: 10.1099/Mic.0.028639-0 |
0.403 |
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2009 |
Liu T, Cane DE, Deng Z. The enzymology of polyether biosynthesis. Methods in Enzymology. 459: 187-214. PMID 19362641 DOI: 10.1016/S0076-6879(09)04609-6 |
0.346 |
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2009 |
Ou HY, He X, Shao Y, Tai C, Rajakumar K, Deng Z. dndDB: a database focused on phosphorothioation of the DNA backbone. Plos One. 4: e5132. PMID 19357771 DOI: 10.1371/Journal.Pone.0005132 |
0.352 |
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2009 |
Chen W, Huang T, He X, Meng Q, You D, Bai L, Li J, Wu M, Li R, Xie Z, Zhou H, Zhou X, Tan H, Deng Z. Characterization of the polyoxin biosynthetic gene cluster from Streptomyces cacaoi and engineered production of polyoxin H. The Journal of Biological Chemistry. 284: 10627-38. PMID 19233844 DOI: 10.1074/Jbc.M807534200 |
0.409 |
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2009 |
Yao F, Xu T, Zhou X, Deng Z, You D. Functional analysis of spfD gene involved in DNA phosphorothioation in Pseudomonas fluorescens Pf0-1. Febs Letters. 583: 729-33. PMID 19171139 DOI: 10.1016/J.Febslet.2009.01.029 |
0.345 |
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2009 |
Chen S, Mao X, Shen Y, Zhou Y, Li J, Wang L, Tao X, Yang L, Wang Y, Zhou X, Deng Z, Wei D. Tailoring the P450 monooxygenase gene for FR-008/candicidin biosynthesis. Applied and Environmental Microbiology. 75: 1778-81. PMID 19139241 DOI: 10.1128/Aem.00859-08 |
0.358 |
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2009 |
Sun Y, He X, Liang J, Zhou X, Deng Z. Analysis of functions in plasmid pHZ1358 influencing its genetic and structural stability in Streptomyces lividans 1326. Applied Microbiology and Biotechnology. 82: 303-10. PMID 19066884 DOI: 10.1007/S00253-008-1793-7 |
0.373 |
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2009 |
Xu H, Yang J, Bai L, Deng Z, Mahmud T. Genetically engineered production of 1,1'-bis-valienamine and validienamycin in Streptomyces hygroscopicus and their conversion to valienamine. Applied Microbiology and Biotechnology. 81: 895-902. PMID 18820907 DOI: 10.1007/S00253-008-1711-Z |
0.346 |
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2009 |
Li L, Bai L, Zhou X, Deng Z. Enhanced validamycin production and gene expression at elevated temperature in Streptomyces hygroscopicus subsp. jingangensis 5008 Science Bulletin. 54: 1204-1209. DOI: 10.1007/S11434-009-0128-0 |
0.346 |
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2008 |
Shaikh F, Spence RP, Levi K, Ou H, Deng Z, Towner KJ, Rajakumar K. ATPase genes of diverse multidrug-resistant Acinetobacter baumannii isolates frequently harbour integrated DNA Journal of Antimicrobial Chemotherapy. 63: 260-264. PMID 19022777 DOI: 10.1093/Jac/Dkn481 |
0.349 |
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2008 |
Zhou Y, Meng Q, You D, Li J, Chen S, Ding D, Zhou X, Zhou H, Bai L, Deng Z. Selective removal of aberrant extender units by a type II thioesterase for efficient FR-008/candicidin biosynthesis in Streptomyces sp. strain FR-008. Applied and Environmental Microbiology. 74: 7235-42. PMID 18836004 DOI: 10.1128/Aem.01012-08 |
0.397 |
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2008 |
Zhao P, Bai L, Ma J, Zeng Y, Li L, Zhang Y, Lu C, Dai H, Wu Z, Li Y, Wu X, Chen G, Hao X, Shen Y, Deng Z, et al. Amide N-glycosylation by Asm25, an N-glycosyltransferase of ansamitocins. Chemistry & Biology. 15: 863-74. PMID 18721757 DOI: 10.1016/J.Chembiol.2008.06.007 |
0.318 |
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2008 |
Xu H, Minagawa K, Bai L, Deng Z, Mahmud T. Catalytic analysis of the validamycin glycosyltransferase (ValG) and enzymatic production of 4''-epi-validamycin A. Journal of Natural Products. 71: 1233-6. PMID 18563934 DOI: 10.1021/Np800185K |
0.315 |
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2008 |
Liu T, Lin X, Zhou X, Deng Z, Cane DE. Mechanism of thioesterase-catalyzed chain release in the biosynthesis of the polyether antibiotic nanchangmycin. Chemistry & Biology. 15: 449-58. PMID 18482697 DOI: 10.1016/J.Chembiol.2008.04.006 |
0.366 |
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2008 |
Li L, Xu Z, Xu X, Wu J, Zhang Y, He X, Zabriskie TM, Deng Z. The mildiomycin biosynthesis: initial steps for sequential generation of 5-hydroxymethylcytidine 5'-monophosphate and 5-hydroxymethylcytosine in Streptoverticillium rimofaciens ZJU5119. Chembiochem : a European Journal of Chemical Biology. 9: 1286-94. PMID 18412191 DOI: 10.1002/Cbic.200800008 |
0.425 |
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2008 |
Tang H, Wang S, Ma L, Meng X, Deng Z, Zhang D, Ma C, Xu P. A Novel Gene, Encoding 6-Hydroxy-3-Succinoylpyridine Hydroxylase, Involved in Nicotine Degradation by Pseudomonas putida Strain S16 Applied and Environmental Microbiology. 74: 1567-1574. PMID 18203859 DOI: 10.1128/Aem.02529-07 |
0.383 |
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2007 |
Ou HY, Ju CTS, Thong KL, Ahmad N, Deng Z, Barer MR, Rajakumar K. Translational genomics to develop a Salmonella enterica serovar paratyphi a multiplex polymerase chain reaction assay Journal of Molecular Diagnostics. 9: 624-630. PMID 17975028 DOI: 10.2353/Jmoldx.2007.070064 |
0.329 |
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2007 |
Wang L, Chen S, Xu T, Taghizadeh K, Wishnok JS, Zhou X, You D, Deng Z, Dedon PC. Phosphorothioation of DNA in bacteria by dnd genes. Nature Chemical Biology. 3: 709-10. PMID 17934475 DOI: 10.1038/Nchembio.2007.39 |
0.319 |
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2007 |
He X, Ou H, Yu Q, Zhou X, Wu J, Liang J, Zhang W, Rajakumar K, Deng Z. Analysis of a genomic island housing genes for DNA S‐modification system in Streptomyces lividans 66 and its counterparts in other distantly related bacteria Molecular Microbiology. 65: 1034-1048. PMID 17640271 DOI: 10.1111/J.1365-2958.2007.05846.X |
0.381 |
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2007 |
Harvey BM, Mironenko T, Sun Y, Hong H, Deng Z, Leadlay PF, Weissman KJ, Haydock SF. Insights into polyether biosynthesis from analysis of the nigericin biosynthetic gene cluster in Streptomyces sp. DSM4137. Chemistry & Biology. 14: 703-14. PMID 17584617 DOI: 10.1016/J.Chembiol.2007.05.011 |
0.358 |
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2007 |
Hua D, Ma C, Lin S, Song L, Deng Z, Maomy Z, Zhang Z, Yu B, Xu P. Biotransformation of isoeugenol to vanillin by a newly isolated Bacillus pumilus strain: identification of major metabolites. Journal of Biotechnology. 130: 463-70. PMID 17583367 DOI: 10.1016/J.Jbiotec.2007.05.003 |
0.335 |
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2007 |
Ou HY, He X, Harrison EM, Kulasekara BR, Thani AB, Kadioglu A, Lory S, Hinton JC, Barer MR, Deng Z, Rajakumar K. MobilomeFINDER: web-based tools for in silico and experimental discovery of bacterial genomic islands. Nucleic Acids Research. 35: W97-W104. PMID 17537813 DOI: 10.1093/Nar/Gkm380 |
0.33 |
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2007 |
You D, Wang L, Yao F, Zhou X, Deng Z. A novel DNA modification by sulfur: DndA is a NifS-like cysteine desulfurase capable of assembling DndC as an iron-sulfur cluster protein in Streptomyces lividans. Biochemistry. 46: 6126-33. PMID 17469805 DOI: 10.1021/Bi602615K |
0.351 |
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2007 |
Liang J, Wang Z, He X, Li J, Zhou X, Deng Z. DNA modification by sulfur: analysis of the sequence recognition specificity surrounding the modification sites. Nucleic Acids Research. 35: 2944-54. PMID 17439960 DOI: 10.1093/Nar/Gkm176 |
0.328 |
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2007 |
Gai Z, Yu B, Li L, Wang Y, Ma C, Feng J, Deng Z, Xu P. Cometabolic degradation of dibenzofuran and dibenzothiophene by a newly isolated carbazole-degrading Sphingomonas sp. strain. Applied and Environmental Microbiology. 73: 2832-8. PMID 17337542 DOI: 10.1128/Aem.02704-06 |
0.301 |
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2007 |
Minagawa K, Zhang Y, Ito T, Bai L, Deng Z, Mahmud T. ValC, a new type of C7-Cyclitol kinase involved in the biosynthesis of the antifungal agent validamycin A. Chembiochem : a European Journal of Chemical Biology. 8: 632-41. PMID 17335096 DOI: 10.1002/Cbic.200600528 |
0.372 |
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2007 |
Wang L, Yu Y, He X, Zhou X, Deng Z, Chater KF, Tao M. Role of an FtsK-Like Protein in Genetic Stability in Streptomyces coelicolor A3(2) Journal of Bacteriology. 189: 2310-2318. PMID 17209017 DOI: 10.1128/Jb.01660-06 |
0.322 |
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2006 |
Li W, Wu J, Tao W, Zhao C, Wang Y, He X, Chandra G, Zhou X, Deng Z, Chater KF, Tao M. A genetic and bioinformatic analysis of Streptomyces coelicolor genes containing TTA codons, possible targets for regulation by a developmentally significant tRNA. Fems Microbiology Letters. 266: 20-8. PMID 17100986 DOI: 10.1111/J.1574-6968.2006.00494.X |
0.365 |
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2006 |
Li W, Ying X, Guo Y, Yu Z, Zhou X, Deng Z, Kieser H, Chater KF, Tao M. Identification of a Gene Negatively Affecting Antibiotic Production and Morphological Differentiation in Streptomyces coelicolor A3(2) Journal of Bacteriology. 188: 8368-8375. PMID 17041057 DOI: 10.1128/Jb.00933-06 |
0.393 |
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2006 |
Zhao C, Ju J, Christenson SD, Smith WC, Song D, Zhou X, Shen B, Deng Z. Utilization of the methoxymalonyl-acyl carrier protein biosynthesis locus for cloning the oxazolomycin biosynthetic gene cluster from Streptomyces albus JA3453. Journal of Bacteriology. 188: 4142-7. PMID 16707707 DOI: 10.1128/Jb.00173-06 |
0.377 |
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2006 |
Jian X, Pang X, Yu Y, Zhou X, Deng Z. Identification of genes necessary for jinggangmycin biosynthesis from Streptomyces hygroscopicus 10-22 Antonie Van Leeuwenhoek International Journal of General and Molecular Microbiology. 90: 29-39. PMID 16680521 DOI: 10.1007/S10482-006-9058-X |
0.388 |
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2006 |
Wang L, Chen S, Xiao X, Huang X, You D, Zhou X, Deng Z. arsRBOCT arsenic resistance system encoded by linear plasmid pHZ227 in Streptomyces sp. strain FR-008. Applied and Environmental Microbiology. 72: 3738-42. PMID 16672525 DOI: 10.1128/Aem.72.5.3738-3742.2006 |
0.366 |
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2006 |
Bai L, Li L, Xu H, Minagawa K, Yu Y, Zhang Y, Zhou X, Floss HG, Mahmud T, Deng Z. Functional analysis of the validamycin biosynthetic gene cluster and engineered production of validoxylamine A. Chemistry & Biology. 13: 387-97. PMID 16632251 DOI: 10.1016/J.Chembiol.2006.02.002 |
0.406 |
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2006 |
Wang HA, Qin L, Lu P, Pang ZX, Deng ZX, Zhao GP. cvhA gene of Streptomyces hygroscopicus 10-22 encodes a negative regulator for mycelia development. Acta Biochimica Et Biophysica Sinica. 38: 271-80. PMID 16604267 DOI: 10.1111/J.1745-7270.2006.00160.X |
0.342 |
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2005 |
Yu Y, Bai L, Minagawa K, Jian X, Li L, Li J, Chen S, Cao E, Mahmud T, Floss HG, Zhou X, Deng Z. Gene cluster responsible for validamycin biosynthesis in Streptomyces hygroscopicus subsp. jinggangensis 5008. Applied and Environmental Microbiology. 71: 5066-76. PMID 16151088 DOI: 10.1128/Aem.71.9.5066-5076.2005 |
0.396 |
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2005 |
Zhou X, He X, Liang J, Li A, Xu T, Kieser T, Helmann JD, Deng Z. A novel DNA modification by sulphur. Molecular Microbiology. 57: 1428-38. PMID 16102010 DOI: 10.1111/J.1365-2958.2005.04764.X |
0.376 |
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2005 |
Zhu D, He X, Zhou X, Deng Z. Expression of the melC operon in several Streptomyces strains is positively regulated by AdpA, an AraC family transcriptional regulator involved in morphological development in Streptomyces coelicolor. Journal of Bacteriology. 187: 3180-7. PMID 15838045 DOI: 10.1128/Jb.187.9.3180-3187.2005 |
0.358 |
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2004 |
Qin L, Wang H, Wu Z, Zhang X, Jin M, Deng Z, Zhao G. Identification and characterization of hmr19 gene encoding a multidrug resistance efflux protein from Streptomyces hygroscopicus subsp. yingchengensis strain 10-22. Acta Biochimica Et Biophysica Sinica. 36: 519-528. PMID 15295643 DOI: 10.1093/Abbs/36.8.519 |
0.342 |
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2004 |
Li X, Zhou X, Deng Z. Isolation and characterization of Micromonospora phage PhiHAU8 and development into a phasmid. Applied and Environmental Microbiology. 70: 3893-7. PMID 15240260 DOI: 10.1128/Aem.70.7.3893-3897.2004 |
0.318 |
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2003 |
Sun Y, Zhou X, Tu G, Deng Z. Identification of a gene cluster encoding meilingmycin biosynthesis among multiple polyketide synthase contigs isolated from Streptomyces nanchangensis NS3226. Archives of Microbiology. 180: 101-7. PMID 12811466 DOI: 10.1007/S00203-003-0564-1 |
0.374 |
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1988 |
Zhou X, Deng Z, Firmin JL, Hopwood DA, Kieser T. Site-specific degradation of Streptomyces lividans DNA during electrophoresis in buffers contaminated with ferrous iron Nucleic Acids Research. 16: 4341-4352. PMID 2837731 DOI: 10.1093/Nar/16.10.4341 |
0.3 |
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