Jingjing Li - Publications

Affiliations: 
2007-2011 Molecular Genetics University of Toronto, Toronto, ON, Canada 

28 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Lian C, Lan J, Ma R, Li J, Zhang F, Zhang B, Liu X, Chen S. Genome-Wide Analysis of Aux/IAA Gene Family in : Identification, Phylogenetic Analysis, and Determination of Response to Various Phytohormones. Plants (Basel, Switzerland). 13. PMID 38475411 DOI: 10.3390/plants13050564  0.305
2023 Lyu B, Li J, Niemeyer B, Anderson D, Beerntsen B, Song Q. Identification, structural modeling, gene expression analysis and RNAi effect of putative phospholipase A in the lone star tick Amblyomma americanum. Ticks and Tick-Borne Diseases. 15: 102256. PMID 37734164 DOI: 10.1016/j.ttbdis.2023.102256  0.309
2023 Li Y, Guan H, Li J, Zhang J, Wang Y, Li J, Tan H. An intricate regulation of WblA controlling production of silent tylosin analogues and abolishment of expressible nikkomycin. Science China. Life Sciences. PMID 36607495 DOI: 10.1007/s11427-022-2199-1  0.447
2022 Jiang P, Gao F, Liu S, Zhang S, Zhang X, Xia Z, Zhang W, Jiang T, Zhu JL, Zhang Z, Shu Q, Snyder M, Li J. Longitudinally tracking personal physiomes for precision management of childhood epilepsy. Plos Digital Health. 1: e0000161. PMID 36812648 DOI: 10.1371/journal.pdig.0000161  0.45
2021 Li Y, Yu H, Guan H, Li J, Zhang J, Xiang H, Li J, Tan H. Activation of Cryptic Antibiotic Biosynthetic Gene Clusters Guided by RNA-seq Data from Both and ΔwblA. Antibiotics (Basel, Switzerland). 10. PMID 34572679 DOI: 10.3390/antibiotics10091097  0.41
2019 Li J, Li X, Zhang S, Snyder M. Gene-Environment Interaction in the Era of Precision Medicine. Cell. 177: 38-44. PMID 30901546 DOI: 10.1016/J.Cell.2019.03.004  0.333
2017 Li J, Oehlert J, Snyder M, Stevenson DK, Shaw GM. Fetal de novo mutations and preterm birth. Plos Genetics. 13: e1006689. PMID 28388617 DOI: 10.1371/Journal.Pgen.1006689  0.307
2016 Li Y, Li J, Tian Z, Xu Y, Zhang J, Liu W, Tan H. Coordinative Modulation of Chlorothricin Biosynthesis by Binding of the Glycosylated Intermediates and End Product to A Responsive Regulator ChlF1. The Journal of Biological Chemistry. PMID 26750095 DOI: 10.1074/Jbc.M115.695874  0.323
2015 Li J, Ma Z, Shi M, Malty RH, Aoki H, Minic Z, Phanse S, Jin K, Wall DP, Zhang Z, Urban AE, Hallmayer J, Babu M, Snyder M. Identification of Human Neuronal Protein Complexes Reveals Biochemical Activities and Convergent Mechanisms of Action in Autism Spectrum Disorders. Cell Systems. 1: 361-374. PMID 26949739 DOI: 10.1016/J.Cels.2015.11.002  0.552
2015 Li J, Yu KH, Oehlert J, Jeliffe-Pawlowski LL, Gould JB, Stevenson DK, Snyder M, Shaw GM, O'Brodovich HM. Exome Sequencing of Neonatal Blood Spots Identifies Genes Implicated in Bronchopulmonary Dysplasia. American Journal of Respiratory and Critical Care Medicine. PMID 26030808 DOI: 10.1164/Rccm.201501-0168Oc  0.312
2014 Li J, Shi M, Ma Z, Zhao S, Euskirchen G, Ziskin J, Urban A, Hallmayer J, Snyder M. Integrated systems analysis reveals a molecular network underlying autism spectrum disorders. Molecular Systems Biology. 10: 774. PMID 25549968 DOI: 10.15252/Msb.20145487  0.4
2014 Cheng Y, Ma Z, Kim BH, Wu W, Cayting P, Boyle AP, Sundaram V, Xing X, Dogan N, Li J, Euskirchen G, Lin S, Lin Y, Visel A, Kawli T, et al. Principles of regulatory information conservation between mouse and human. Nature. 515: 371-5. PMID 25409826 DOI: 10.1038/Nature13985  0.339
2014 Li J, Kim T, Nutiu R, Ray D, Hughes TR, Zhang Z. Identifying mRNA sequence elements for target recognition by human Argonaute proteins. Genome Research. 24: 775-85. PMID 24663241 DOI: 10.1101/Gr.162230.113  0.569
2013 Kasowski M, Kyriazopoulou-Panagiotopoulou S, Grubert F, Zaugg JB, Kundaje A, Liu Y, Boyle AP, Zhang QC, Zakharia F, Spacek DV, Li J, Xie D, Olarerin-George A, Steinmetz LM, Hogenesch JB, et al. Extensive variation in chromatin states across humans. Science (New York, N.Y.). 342: 750-2. PMID 24136358 DOI: 10.1126/Science.1242510  0.329
2013 Li J, Zhang Z. miRNA regulatory variation in human evolution. Trends in Genetics : Tig. 29: 116-24. PMID 23128010 DOI: 10.1016/J.Tig.2012.10.008  0.627
2012 Li J, Liu Y, Xin X, Kim TS, Cabeza EA, Ren J, Nielsen R, Wrana JL, Zhang Z. Evidence for positive selection on a number of MicroRNA regulatory interactions during recent human evolution. Plos Genetics. 8: e1002578. PMID 22457636 DOI: 10.1371/Journal.Pgen.1002578  0.59
2012 Jin K, Li J, Vizeacoumar FS, Li Z, Min R, Zamparo L, Vizeacoumar FJ, Datti A, Andrews B, Boone C, Zhang Z. PhenoM: a database of morphological phenotypes caused by mutation of essential genes in Saccharomyces cerevisiae. Nucleic Acids Research. 40: D687-94. PMID 22009677 DOI: 10.1093/Nar/Gkr827  0.657
2011 Li Z, Vizeacoumar FJ, Bahr S, Li J, Warringer J, Vizeacoumar FS, Min R, Vandersluis B, Bellay J, Devit M, Fleming JA, Stephens A, Haase J, Lin ZY, Baryshnikova A, et al. Systematic exploration of essential yeast gene function with temperature-sensitive mutants. Nature Biotechnology. 29: 361-7. PMID 21441928 DOI: 10.1038/Nbt.1832  0.638
2010 Li J, Yuan Z, Zhang Z. The cellular robustness by genetic redundancy in budding yeast. Plos Genetics. 6: e1001187. PMID 21079672 DOI: 10.1371/Journal.Pgen.1001187  0.605
2010 Li J, Liu Y, Kim T, Min R, Zhang Z. Gene expression variability within and between human populations and implications toward disease susceptibility. Plos Computational Biology. 6. PMID 20865155 DOI: 10.1371/Journal.Pcbi.1000910  0.6
2010 Li J, Min R, Vizeacoumar FJ, Jin K, Xin X, Zhang Z. Exploiting the determinants of stochastic gene expression in Saccharomyces cerevisiae for genome-wide prediction of expression noise. Proceedings of the National Academy of Sciences of the United States of America. 107: 10472-7. PMID 20489180 DOI: 10.1073/Pnas.0914302107  0.607
2010 Li J, Yuan Z, Zhang Z. Revisiting the contribution of cis-elements to expression divergence between duplicated genes: the role of chromatin structure. Molecular Biology and Evolution. 27: 1461-6. PMID 20139146 DOI: 10.1093/Molbev/Msq041  0.591
2010 Vizeacoumar FJ, van Dyk N, S Vizeacoumar F, Cheung V, Li J, Sydorskyy Y, Case N, Li Z, Datti A, Nislow C, Raught B, Zhang Z, Frey B, Bloom K, Boone C, et al. Integrating high-throughput genetic interaction mapping and high-content screening to explore yeast spindle morphogenesis. The Journal of Cell Biology. 188: 69-81. PMID 20065090 DOI: 10.1083/Jcb.200909013  0.596
2010 Li J, Liu Y, Dong D, Zhang Z. Evolution of an X-linked primate-specific micro RNA cluster. Molecular Biology and Evolution. 27: 671-83. PMID 19933172 DOI: 10.1093/Molbev/Msp284  0.575
2009 Li J, Min R, Bonner A, Zhang Z. A probabilistic framework to improve microrna target prediction by incorporating proteomics data. Journal of Bioinformatics and Computational Biology. 7: 955-72. PMID 20014473 DOI: 10.1142/S021972000900445X  0.579
2009 Xia Q, Guo Y, Zhang Z, Li D, Xuan Z, Li Z, Dai F, Li Y, Cheng D, Li R, Cheng T, Jiang T, Becquet C, Xu X, Liu C, ... Li J, ... Li J, et al. Complete resequencing of 40 genomes reveals domestication events and genes in silkworm (Bombyx). Science (New York, N.Y.). 326: 433-6. PMID 19713493 DOI: 10.1126/Science.1176620  0.424
2009 Min R, Bonner A, Li J, Zhang Z. Learned random-walk kernels and empirical-map kernels for protein sequence classification. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 16: 457-74. PMID 19254184 DOI: 10.1089/Cmb.2008.0031  0.515
2008 Li J, Musso G, Zhang Z. Preferential regulation of duplicated genes by microRNAs in mammals. Genome Biology. 9: R132. PMID 18727826 DOI: 10.1186/Gb-2008-9-8-R132  0.728
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