Rishi Mukhopadhyay, Ph.D.
Affiliations: | 2010 | Computer Science & Engineering | University of South Carolina, Columbia, SC |
Area:
Computer Science, Bioinformatics BiologyGoogle:
"Rishi Mukhopadhyay"Parents
Sign in to add mentorHomayoun Valafar | grad student | 2010 | University of South Carolina | |
(Dynafold: A dynamic programming approach to protein structure calculation from residual dipolar couplings.) |
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Publications
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Cole CA, Mukhopadhyay R, Omar H, et al. (2016) Structure Calculation and Reconstruction of Discrete State Dynamics from Residual Dipolar Couplings. Journal of Chemical Theory and Computation |
Mukhopadhyay R, Irausquin S, Schmidt C, et al. (2014) Dynafold: a dynamic programming approach to protein backbone structure determination from minimal sets of Residual Dipolar Couplings. Journal of Bioinformatics and Computational Biology. 12: 1450002 |
Fahim A, Mukhopadhyay R, Yandle R, et al. (2013) Protein structure validation and identification from unassigned residual dipolar coupling data using 2D-PDPA. Molecules (Basel, Switzerland). 18: 10162-88 |
Park SH, Son WS, Mukhopadhyay R, et al. (2009) Phage-induced alignment of membrane proteins enables the measurement and structural analysis of residual dipolar couplings with dipolar waves and lambda-maps. Journal of the American Chemical Society. 131: 14140-1 |
Mukhopadhyay R, Miao X, Shealy P, et al. (2009) Efficient and accurate estimation of relative order tensors from lambda-maps. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 198: 236-47 |
Miao X, Mukhopadhyay R, Valafar H. (2008) Estimation of relative order tensors, and reconstruction of vectors in space using unassigned RDC data and its application. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 194: 202-11 |