Jason E. Shoemaker

Affiliations: 
chemical engineering University of California, Santa Barbara, Santa Barbara, CA, United States 
 chemical & petroleum engineering University of Pittsburgh, Pittsburgh, PA, United States 
Website:
http://www.shoemakerlab.pitt.edu/
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"Jason Shoemaker"

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Francis J. Doyle grad student 2009 UC Santa Barbara
 (Design principles in biological networks: Balancing efficacy with robustness)
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Publications

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Noh H, Hua Z, Chrysinas P, et al. (2021) DeltaNeTS+: elucidating the mechanism of drugs and diseases using gene expression and transcriptional regulatory networks. Bmc Bioinformatics. 22: 108
Ackerman EE, Shoemaker JE. (2020) Network Controllability-Based Prioritization of Candidates for SARS-CoV-2 Drug Repositioning. Viruses. 12
Fukuyama S, Iwatsuki-Horimoto K, Kiso M, et al. (2020) Pathogenesis of influenza A(H7N9) virus in aged non-human primates. The Journal of Infectious Diseases
Sato R, Makino-Okamura C, Lin Q, et al. (2020) Repurposing the Psoriasis Drug Oxarol to an ointment adjuvant for the influenza vaccine. International Immunology
Ackerman EE, Alcorn JF, Hase T, et al. (2019) A dual controllability analysis of influenza virus-host protein-protein interaction networks for antiviral drug target discovery. Bmc Bioinformatics. 20: 297
Ackerman EE, Mochan E, Shoemaker JE. (2019) Strain-Specific Immune Response to Influenza Virus Infection Ifac-Papersonline. 52: 101-106
Ackerman EE, Kawakami E, Katoh M, et al. (2018) Network-Guided Discovery of Influenza Virus Replication Host Factors. Mbio. 9
Gregg RW, Sarkar SN, Shoemaker JE. (2018) Mathematical Modeling of the cGAS Pathway Reveals Robustness of DNA Sensing to TREX1 Feedback. Journal of Theoretical Biology
Perkins EJ, Gayen K, Shoemaker JE, et al. (2018) Chemical hazard prediction and hypothesis testing using quantitative adverse outcome pathways. Altex
Noh H, Shoemaker JE, Gunawan R. (2018) Network perturbation analysis of gene transcriptional profiles reveals protein targets and mechanism of action of drugs and influenza A viral infection. Nucleic Acids Research
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