| Year |
Citation |
Score |
| 2023 |
Barth R, Pradhan B, Kim E, Davidson IF, van der Torre J, Peters JM, Dekker C. Author Correction: Testing pseudotopological and nontopological models for SMC-driven DNA loop extrusion against roadblock-traversal experiments. Scientific Reports. 13: 11616. PMID 37463951 DOI: 10.1038/s41598-023-38687-5 |
0.781 |
|
| 2023 |
Barth R, Pradhan B, Kim E, Davidson IF, van der Torre J, Peters JM, Dekker C. Testing pseudotopological and nontopological models for SMC-driven DNA loop extrusion against roadblock-traversal experiments. Scientific Reports. 13: 8100. PMID 37208374 DOI: 10.1038/s41598-023-35359-2 |
0.796 |
|
| 2023 |
Kim E, Barth R, Dekker C. Looping the Genome with SMC Complexes. Annual Review of Biochemistry. PMID 37137166 DOI: 10.1146/annurev-biochem-032620-110506 |
0.579 |
|
| 2022 |
Holub M, Birnie A, Japaridze A, van der Torre J, Ridder MD, de Ram C, Pabst M, Dekker C. Extracting and characterizing protein-free megabase-pair DNA for experiments. Cell Reports Methods. 2: 100366. PMID 36590691 DOI: 10.1016/j.crmeth.2022.100366 |
0.32 |
|
| 2022 |
Pradhan B, Barth R, Kim E, Davidson IF, Bauer B, van Laar T, Yang W, Ryu JK, van der Torre J, Peters JM, Dekker C. SMC complexes can traverse physical roadblocks bigger than their ring size. Cell Reports. 41: 111491. PMID 36261017 DOI: 10.1016/j.celrep.2022.111491 |
0.801 |
|
| 2022 |
Kim E, Gonzalez AM, Pradhan B, van der Torre J, Dekker C. Condensin-driven loop extrusion on supercoiled DNA. Nature Structural & Molecular Biology. 29: 719-727. PMID 35835864 DOI: 10.1038/s41594-022-00802-x |
0.806 |
|
| 2022 |
Tišma M, Panoukidou M, Antar H, Soh YM, Barth R, Pradhan B, Barth A, van der Torre J, Michieletto D, Gruber S, Dekker C. ParB proteins can bypass DNA-bound roadblocks via dimer-dimer recruitment. Science Advances. 8: eabn3299. PMID 35767606 DOI: 10.1126/sciadv.abn3299 |
0.796 |
|
| 2021 |
Hulleman CN, Thorsen RØ, Kim E, Dekker C, Stallinga S, Rieger B. Simultaneous orientation and 3D localization microscopy with a Vortex point spread function. Nature Communications. 12: 5934. PMID 34635658 DOI: 10.1038/s41467-021-26228-5 |
0.587 |
|
| 2021 |
Alfaro JA, Bohländer P, Dai M, Filius M, Howard CJ, van Kooten XF, Ohayon S, Pomorski A, Schmid S, Aksimentiev A, Anslyn EV, Bedran G, Cao C, Chinappi M, Coyaud E, ... Dekker C, et al. The emerging landscape of single-molecule protein sequencing technologies. Nature Methods. 18: 604-617. PMID 34099939 DOI: 10.1038/s41592-021-01143-1 |
0.436 |
|
| 2021 |
Ryu JK, Bouchoux C, Liu HW, Kim E, Minamino M, de Groot R, Katan AJ, Bonato A, Marenduzzo D, Michieletto D, Uhlmann F, Dekker C. Bridging-induced phase separation induced by cohesin SMC protein complexes. Science Advances. 7. PMID 33568486 DOI: 10.1126/sciadv.abe5905 |
0.597 |
|
| 2020 |
Japaridze A, Gogou C, Kerssemakers JWJ, Nguyen HM, Dekker C. Direct observation of independently moving replisomes in Escherichia coli. Nature Communications. 11: 3109. PMID 32561741 DOI: 10.1038/S41467-020-16946-7 |
0.303 |
|
| 2020 |
Kim E, Kerssemakers J, Shaltiel IA, Haering CH, Dekker C. DNA-loop extruding condensin complexes can traverse one another. Nature. PMID 32132705 DOI: 10.1038/S41586-020-2067-5 |
0.66 |
|
| 2019 |
Elbatsh AMO, Kim E, Eeftens JM, Raaijmakers JA, van der Weide RH, García-Nieto A, Bravo S, Ganji M, Uit de Bos J, Teunissen H, Medema RH, de Wit E, Haering CH, Dekker C, Rowland BD. Distinct Roles for Condensin's Two ATPase Sites in Chromosome Condensation. Molecular Cell. PMID 31629658 DOI: 10.1016/J.Molcel.2019.09.020 |
0.587 |
|
| 2019 |
Restrepo-Pérez L, Huang G, Bohländer PR, Worp N, Eelkema R, Maglia G, Joo C, Dekker C. Resolving Chemical Modifications to a Single Amino Acid within a Peptide Using a Biological Nanopore. Acs Nano. PMID 31536327 DOI: 10.1021/Acsnano.9B05156 |
0.303 |
|
| 2019 |
Wu F, Swain P, Kuijpers L, Zheng X, Felter K, Guurink M, Solari J, Jun S, Shimizu TS, Chaudhuri D, Mulder B, Dekker C. Cell Boundary Confinement Sets the Size and Position of the E. coli Chromosome. Current Biology : Cb. PMID 31155353 DOI: 10.1016/J.Cub.2019.05.015 |
0.303 |
|
| 2019 |
Hol FJH, Whitesides GM, Dekker C. Bacteria-in-paper, a versatile platform to study bacterial ecology. Ecology Letters. PMID 31099139 DOI: 10.1111/Ele.13274 |
0.402 |
|
| 2019 |
Wu F, Japaridze A, Zheng X, Wiktor J, Kerssemakers JWJ, Dekker C. Direct imaging of the circular chromosome in a live bacterium. Nature Communications. 10: 2194. PMID 31097704 DOI: 10.1038/S41467-019-10221-0 |
0.321 |
|
| 2019 |
Kabiri Y, Ravelli RBG, Lehnert T, Qi H, Katan AJ, Roest N, Kaiser U, Dekker C, Peters PJ, Zandbergen H. Visualization of unstained DNA nanostructures with advanced in-focus phase contrast TEM techniques. Scientific Reports. 9: 7218. PMID 31076614 DOI: 10.1038/S41598-019-43687-5 |
0.364 |
|
| 2019 |
Fanalista F, Birnie A, Maan R, Burla F, Charles K, Pawlik G, Deshpande S, Koenderink GH, Dogterom M, Dekker C. Shape and Size Control of Artificial Cells for Bottom-Up Biology. Acs Nano. PMID 31074603 DOI: 10.1021/Acsnano.9B00220 |
0.302 |
|
| 2019 |
Deshpande S, Brandenburg F, Lau A, Last MGF, Spoelstra WK, Reese L, Wunnava S, Dogterom M, Dekker C. Spatiotemporal control of coacervate formation within liposomes. Nature Communications. 10: 1800. PMID 30996302 DOI: 10.1038/S41467-019-09855-X |
0.306 |
|
| 2019 |
Zhao S, Restrepo-Pérez L, Soskine M, Maglia G, Joo C, Dekker C, Aksimentiev A. Electro-Mechanical Conductance Modulation of a Nanopore Using a Removable Gate. Acs Nano. PMID 30715850 DOI: 10.1021/Acsnano.8B09266 |
0.305 |
|
| 2019 |
Tans SJ, Dekker C. Potential modulations along carbon nanotubes Nature. 404: 834-5. PMID 10786780 DOI: 10.1038/35009026 |
0.307 |
|
| 2019 |
Schmid S, Stoemmer P, Dietz H, Dekker C. High Bandwidth Sensing of Single Protein Dynamics using Nanopores and DNA Origami Biophysical Journal. 116: 341a-342a. DOI: 10.1016/J.Bpj.2018.11.1861 |
0.403 |
|
| 2018 |
Kim SH, Ganji M, Kim E, van der Torre J, Abbondanzieri E, Dekker C. DNA sequence encodes the position of DNA supercoils. Elife. 7. PMID 30523779 DOI: 10.7554/Elife.36557 |
0.656 |
|
| 2018 |
Verschueren DV, Pud S, Shi X, De Angelis L, Kuipers L, Dekker C. Label-Free Optical Detection of DNA Translocations Through Plasmonic Nanopores. Acs Nano. PMID 30512931 DOI: 10.1021/Acsnano.8B06758 |
0.349 |
|
| 2018 |
Kabiri Y, Angelin A, Ahmed I, Mutlu H, Bauer J, Niemeyer CM, Zandbergen H, Dekker C. Intercalating electron dyes for TEM visualization of DNA at the single-molecule level. Chembiochem : a European Journal of Chemical Biology. PMID 30501011 DOI: 10.1002/Cbic.201800638 |
0.398 |
|
| 2018 |
Shi X, Verschueren DV, Dekker C. Active Delivery of Single DNA Molecules into a Plasmonic Nanopore for Label-Free Optical Sensing. Nano Letters. PMID 30460853 DOI: 10.1021/Acs.Nanolett.8B04146 |
0.32 |
|
| 2018 |
Restrepo-Pérez L, Joo C, Dekker C. Paving the way to single-molecule protein sequencing. Nature Nanotechnology. 13: 786-796. PMID 30190617 DOI: 10.1038/S41565-018-0236-6 |
0.309 |
|
| 2018 |
Yang W, Restrepo-Pérez L, Bengtson M, Heerema SJ, Birnie A, van der Torre J, Dekker C. Detection of CRISPR-dCas9 on DNA with solid-state nanopores. Nano Letters. PMID 30187755 DOI: 10.1021/Acs.Nanolett.8B02968 |
0.382 |
|
| 2018 |
Cadinu P, Campolo G, Pud S, Yang W, Edel JB, Dekker C, Ivanov AP. Double barrel nanopores as a new tool for controlling single-molecule transport. Nano Letters. PMID 29569930 DOI: 10.1021/Acs.Nanolett.8B00860 |
0.35 |
|
| 2018 |
Caspi Y, Dekker C. Dividing the Archaeal Way: The Ancient Cdv Cell-Division Machinery. Frontiers in Microbiology. 9: 174. PMID 29551994 DOI: 10.3389/Fmicb.2018.00174 |
0.303 |
|
| 2018 |
Ketterer P, Ananth AN, Laman Trip DS, Mishra A, Bertosin E, Ganji M, van der Torre J, Onck P, Dietz H, Dekker C. DNA origami scaffold for studying intrinsically disordered proteins of the nuclear pore complex. Nature Communications. 9: 902. PMID 29500415 DOI: 10.1038/S41467-018-03313-W |
0.374 |
|
| 2018 |
Heerema SJ, Vicarelli L, Pud S, Schouten RN, Zandbergen HW, Dekker C. Probing DNA translocations with Inplane Current Signals in a Graphene Nanoribbon with a Nanopore. Acs Nano. PMID 29474060 DOI: 10.1021/Acsnano.7B08635 |
0.32 |
|
| 2018 |
Ganji M, Shaltiel IA, Bisht S, Kim E, Kalichava A, Haering CH, Dekker C. Real-time imaging of DNA loop extrusion by condensin. Science (New York, N.Y.). PMID 29472443 DOI: 10.1126/Science.Aar7831 |
0.66 |
|
| 2018 |
Kim SH, Ganji M, Kim E, Torre Jvd, Abbondanzieri E, Dekker C. Author response: DNA sequence encodes the position of DNA supercoils Elife. DOI: 10.7554/Elife.36557.055 |
0.367 |
|
| 2017 |
Wiktor J, van der Does M, Büller L, Sherratt DJ, Dekker C. Direct observation of end resection by RecBCD during double-stranded DNA break repair in vivo. Nucleic Acids Research. PMID 29294118 DOI: 10.1093/Nar/Gkx1290 |
0.416 |
|
| 2017 |
Shi X, Verschueren D, Pud S, Dekker C. Integrating Sub-3 nm Plasmonic Gaps into Solid-State Nanopores. Small (Weinheim An Der Bergstrasse, Germany). PMID 29251411 DOI: 10.1002/Smll.201703307 |
0.34 |
|
| 2017 |
Eeftens J, Dekker C. Catching DNA with hoops-biophysical approaches to clarify the mechanism of SMC proteins. Nature Structural & Molecular Biology. 24: 1012-1020. PMID 29215640 DOI: 10.1038/Nsmb.3507 |
0.366 |
|
| 2017 |
Eeftens JM, Bisht S, Kerssemakers J, Kschonsak M, Haering CH, Dekker C. Real-time detection of condensin-driven DNA compaction reveals a multistep binding mechanism. The Embo Journal. PMID 29118001 DOI: 10.15252/Embj.201797596 |
0.433 |
|
| 2017 |
Terakawa T, Bisht S, Eeftens JM, Dekker C, Haering CH, Greene EC. The condensin complex is a mechanochemical motor that translocates along DNA. Science (New York, N.Y.). PMID 28882993 DOI: 10.1126/Science.Aan6516 |
0.366 |
|
| 2017 |
Restrepo-Pérez L, John S, Aksimentiev A, Joo C, Dekker C. SDS-assisted protein transport through solid-state nanopores. Nanoscale. PMID 28776058 DOI: 10.1039/C7Nr02450A |
0.343 |
|
| 2017 |
Kabiri Y, Ananth AN, van der Torre J, Katan A, Hong JY, Malladi S, Kong J, Zandbergen H, Dekker C. Distortion of DNA Origami on Graphene Imaged with Advanced TEM Techniques. Small (Weinheim An Der Bergstrasse, Germany). PMID 28620911 DOI: 10.1002/Smll.201700876 |
0.347 |
|
| 2017 |
Burnham DR, Nijholt B, De Vlaminck I, Quan J, Yusufzai T, Dekker C. Annealing helicase HARP closes RPA-stabilized DNA bubbles non-processively. Nucleic Acids Research. PMID 28334870 DOI: 10.1093/Nar/Gkx147 |
0.413 |
|
| 2017 |
Nechemia-Arbely Y, Fachinetti D, Miga KH, Sekulic N, Soni GV, Kim DH, Wong AK, Lee AY, Nguyen K, Dekker C, Ren B, Black BE, Cleveland DW. Human centromeric CENP-A chromatin is a homotypic, octameric nucleosome at all cell cycle points. The Journal of Cell Biology. PMID 28235947 DOI: 10.1083/Jcb.201608083 |
0.319 |
|
| 2017 |
Vlijm R, Kim SH, De Zwart PL, Dalal Y, Dekker C. The supercoiling state of DNA determines the handedness of both H3 and CENP-A nucleosomes. Nanoscale. PMID 28094382 DOI: 10.1039/C6Nr06245H |
0.376 |
|
| 2017 |
Restrepo-Perez L, Soskine M, John S, Aksimentiev A, Maglia G, Joo C, Dekker C. Single-Molecule Protein Fingerprinting with Nanopores Biophysical Journal. 112: 330a. DOI: 10.1016/J.Bpj.2016.11.1789 |
0.32 |
|
| 2017 |
Hyun Kim S, Ganji M, van der Torre J, Abbondanzieri E, Dekker C. DNA Sequence can Pin the Position of DNA Supercoils Biophysical Journal. 112: 214a. DOI: 10.1016/J.Bpj.2016.11.1182 |
0.42 |
|
| 2016 |
Pud S, Chao SH, Belkin M, Verschueren D, Huijben T, van Engelenburg C, Dekker C, Aksimentiev A. Mechanical Trapping of DNA in a Double-Nanopore System. Nano Letters. 16: 8021-8028. PMID 27960493 DOI: 10.1021/Acs.Nanolett.6B04642 |
0.449 |
|
| 2016 |
Kim SH, Vlijm R, van der Torre J, Dalal Y, Dekker C. CENP-A and H3 Nucleosomes Display a Similar Stability to Force-Mediated Disassembly. Plos One. 11: e0165078. PMID 27820823 DOI: 10.1371/Journal.Pone.0165078 |
0.321 |
|
| 2016 |
Plesa C, Verschueren D, Pud S, van der Torre J, Ruitenberg JW, Witteveen MJ, Jonsson MP, Grosberg AY, Rabin Y, Dekker C. Direct observation of DNA knots using a solid-state nanopore. Nature Nanotechnology. PMID 27525473 DOI: 10.1038/Nnano.2016.153 |
0.816 |
|
| 2016 |
Ganji M, Kim SH, van der Torre J, Abbondanzieri E, Dekker C. Intercalation-based single-molecule fluorescence assay to study DNA supercoil dynamics. Nano Letters. PMID 27356180 DOI: 10.1021/Acs.Nanolett.6B02213 |
0.435 |
|
| 2016 |
Wiktor J, Lesterlin C, Sherratt DJ, Dekker C. CRISPR-mediated control of the bacterial initiation of replication. Nucleic Acids Research. PMID 27036863 DOI: 10.1093/Nar/Gkw214 |
0.344 |
|
| 2016 |
Eeftens JM, Katan AJ, Kschonsak M, Hassler M, de Wilde L, Dief EM, Haering CH, Dekker C. Condensin Smc2-Smc4 Dimers Are Flexible and Dynamic. Cell Reports. PMID 26904946 DOI: 10.1016/J.Celrep.2016.01.063 |
0.312 |
|
| 2016 |
Hol FJ, Rotem O, Jurkevitch E, Dekker C, Koster DA. Bacterial predator-prey dynamics in microscale patchy landscapes. Proceedings. Biological Sciences / the Royal Society. 283. PMID 26865299 DOI: 10.1098/Rspb.2015.2154 |
0.686 |
|
| 2016 |
Heerema SJ, Dekker C. Graphene nanodevices for DNA sequencing. Nature Nanotechnology. 11: 127-36. PMID 26839258 DOI: 10.1038/Nnano.2015.307 |
0.308 |
|
| 2016 |
Hyun Kim S, Vlijm R, de Zwart P, der Torre Jv, Dalal Y, Dekker C. The Handedness of Nucleosomes is Governed by the Supercoiling of DNA Biophysical Journal. 110: 70a. DOI: 10.1016/J.Bpj.2015.11.440 |
0.363 |
|
| 2016 |
Wiktor J, Lesterlin C, Sherratt D, Dekker C. Bacterial Cell Cycle Control by Modified CRISPR Binding Biophysical Journal. 110: 62a. DOI: 10.1016/J.Bpj.2015.11.400 |
0.373 |
|
| 2016 |
Hyun Kim S, Ganji M, van J, Torre d, Abbondanzieri E, Dekker C. The Occurrence of Plectonemes in Supercoiled DNA Depends on DNA Sequence Biophysical Journal. 110: 563a. DOI: 10.1016/J.Bpj.2015.11.3013 |
0.445 |
|
| 2016 |
Ordu O, Vlijm R, Lee M, Lusser A, Dekker C, Dekker NH. Investigating the Handedness Dynamics of Tetrasomes Biophysical Journal. 110: 562a. DOI: 10.1016/J.Bpj.2015.11.3007 |
0.361 |
|
| 2016 |
Eeftens J, Katan A, Kschonsak M, Hassler M, Dief E, de Wilde L, Haering C, Dekker C. Single-Molecule Experiments to Resolve Structural and Mechanical Properties of Condensin Biophysical Journal. 110: 528a. DOI: 10.1016/J.Bpj.2015.11.2826 |
0.388 |
|
| 2015 |
Vlijm R, V D Torre J, Dekker C. Counterintuitive DNA Sequence Dependence in Supercoiling-Induced DNA Melting. Plos One. 10: e0141576. PMID 26513573 DOI: 10.1371/Journal.Pone.0141576 |
0.42 |
|
| 2015 |
Eeftens JM, van der Torre J, Burnham DR, Dekker C. Copper-free click chemistry for attachment of biomolecules in magnetic tweezers. Bmc Biophysics. 8: 9. PMID 26413268 DOI: 10.1186/S13628-015-0023-9 |
0.323 |
|
| 2015 |
Belkin M, Chao SH, Jonsson MP, Dekker C, Aksimentiev A. Plasmonic Nanopores for Trapping, Controlling Displacement and Sequencing of DNA Molecules. Acs Nano. PMID 26401685 DOI: 10.1021/Acsnano.5B04173 |
0.688 |
|
| 2015 |
Pud S, Verschueren D, Vukovic N, Plesa C, Jonsson MP, Dekker C. Self-Aligned Plasmonic Nanopores by Optically Controlled Dielectric Breakdown. Nano Letters. PMID 26333767 DOI: 10.1021/Acs.Nanolett.5B03239 |
0.771 |
|
| 2015 |
Plesa C, van Loo N, Dekker C. DNA nanopore translocation in glutamate solutions. Nanoscale. 7: 13605-9. PMID 26206066 DOI: 10.1039/C5Nr02793D |
0.768 |
|
| 2015 |
Hol FJ, Hubert B, Dekker C, Keymer JE. Density-dependent adaptive resistance allows swimming bacteria to colonize an antibiotic gradient. The Isme Journal. PMID 26140531 DOI: 10.1038/Ismej.2015.107 |
0.756 |
|
| 2015 |
Wu F, Van Rijn E, Van Schie BG, Keymer JE, Dekker C. Multi-color imaging of the bacterial nucleoid and division proteins with blue, orange, and near-infrared fluorescent proteins. Frontiers in Microbiology. 6: 607. PMID 26136737 DOI: 10.3389/Fmicb.2015.00607 |
0.669 |
|
| 2015 |
Wu F, van Schie BG, Keymer JE, Dekker C. Symmetry and scale orient Min protein patterns in shaped bacterial sculptures. Nature Nanotechnology. PMID 26098227 DOI: 10.1038/Nnano.2015.126 |
0.681 |
|
| 2015 |
Hol FJ, Galajda P, Woolthuis RG, Dekker C, Keymer JE. The idiosyncrasy of spatial structure in bacterial competition. Bmc Research Notes. 8: 245. PMID 26081497 DOI: 10.1186/S13104-015-1169-X |
0.765 |
|
| 2015 |
Verschueren DV, Jonsson MP, Dekker C. Temperature dependence of DNA translocations through solid-state nanopores. Nanotechnology. 26: 234004. PMID 25994084 DOI: 10.1088/0957-4484/26/23/234004 |
0.68 |
|
| 2015 |
Plesa C, Ruitenberg JW, Witteveen MJ, Dekker C. Detection of Individual Proteins Bound along DNA Using Solid-State Nanopores. Nano Letters. 15: 3153-8. PMID 25928590 DOI: 10.1021/Acs.Nanolett.5B00249 |
0.798 |
|
| 2015 |
Blosser TR, Loeff L, Westra ER, Vlot M, Künne T, Sobota M, Dekker C, Brouns SJ, Joo C. Two distinct DNA binding modes guide dual roles of a CRISPR-Cas protein complex. Molecular Cell. 58: 60-70. PMID 25752578 DOI: 10.1016/J.Molcel.2015.01.028 |
0.312 |
|
| 2015 |
Plesa C, Dekker C. Data analysis methods for solid-state nanopores. Nanotechnology. 26: 084003. PMID 25648179 DOI: 10.1088/0957-4484/26/8/084003 |
0.742 |
|
| 2015 |
Vlijm R, Mashaghi A, Bernard S, Modesti M, Dekker C. Experimental phase diagram of negatively supercoiled DNA measured by magnetic tweezers and fluorescence. Nanoscale. 7: 3205-16. PMID 25615283 DOI: 10.1039/C4Nr04332D |
0.422 |
|
| 2015 |
Vlijm R, Lee M, Lipfert J, Lusser A, Dekker C, Dekker NH. Nucleosome assembly dynamics involve spontaneous fluctuations in the handedness of tetrasomes. Cell Reports. 10: 216-25. PMID 25578730 DOI: 10.1016/J.Celrep.2014.12.022 |
0.395 |
|
| 2015 |
Li Y, Nicoli F, Chen C, Lagae L, Groeseneken G, Stakenborg T, Zandbergen HW, Dekker C, Van Dorpe P, Jonsson MP. Photoresistance switching of plasmonic nanopores. Nano Letters. 15: 776-82. PMID 25514824 DOI: 10.1021/Nl504516D |
0.604 |
|
| 2015 |
Plesa C, van Loo N, Ketterer P, Dietz H, Dekker C. Velocity of DNA during translocation through a solid-state nanopore. Nano Letters. 15: 732-7. PMID 25496458 DOI: 10.1021/Nl504375C |
0.8 |
|
| 2015 |
Katan AJ, Vlijm R, Lusser A, Dekker C. Dynamics of nucleosomal structures measured by high-speed atomic force microscopy. Small (Weinheim An Der Bergstrasse, Germany). 11: 976-84. PMID 25336288 DOI: 10.1002/Smll.201401318 |
0.384 |
|
| 2015 |
Muthukumar M, Plesa C, Dekker C. Single-molecule sensing with nanopores Physics Today. 68: 40-46. DOI: 10.1063/Pt.3.2881 |
0.778 |
|
| 2015 |
Plesa C, Verschueren D, Ruitenberg JW, Witteveen MJ, Jonsson MP, Grosberg AY, Rabin Y, Dekker C. Observation of DNA Knots Using Solid-State Nanopores Biophysical Journal. 108: 166a. DOI: 10.1016/J.Bpj.2014.11.913 |
0.817 |
|
| 2015 |
Vlijm R, Dalal Y, Dekker C. Torque Mediated Kinetics of CENP-A Nucleosomes Reveals Resilience to Tension Biophysical Journal. 108: 539a. DOI: 10.1016/J.Bpj.2014.11.2954 |
0.345 |
|
| 2015 |
Wu F, van Schie b, Keymer J, Dekker C. Symmetry and Scale Orient Min Oscillation Patterns in Bacterial Shape Sculptures Biophysical Journal. 108: 364a. DOI: 10.1016/J.Bpj.2014.11.1997 |
0.687 |
|
| 2014 |
Nicoli F, Verschueren D, Klein M, Dekker C, Jonsson MP. DNA translocations through solid-state plasmonic nanopores. Nano Letters. 14: 6917-25. PMID 25347403 DOI: 10.1021/Nl503034J |
0.689 |
|
| 2014 |
Hol FJ, Dekker C. Zooming in to see the bigger picture: microfluidic and nanofabrication tools to study bacteria. Science (New York, N.Y.). 346: 1251821. PMID 25342809 DOI: 10.1126/Science.1251821 |
0.716 |
|
| 2014 |
Burnham DR, De Vlaminck I, Henighan T, Dekker C. Skewed brownian fluctuations in single-molecule magnetic tweezers. Plos One. 9: e108271. PMID 25265383 DOI: 10.1371/Journal.Pone.0108271 |
0.376 |
|
| 2014 |
Hol FJ, Voges MJ, Dekker C, Keymer JE. Nutrient-responsive regulation determines biodiversity in a colicin-mediated bacterial community. Bmc Biology. 12: 68. PMID 25159553 DOI: 10.1186/S12915-014-0068-2 |
0.766 |
|
| 2014 |
Plesa C, Ananth AN, Linko V, Gülcher C, Katan AJ, Dietz H, Dekker C. Ionic permeability and mechanical properties of DNA origami nanoplates on solid-state nanopores. Acs Nano. 8: 35-43. PMID 24295288 DOI: 10.1021/Nn405045X |
0.792 |
|
| 2014 |
Katan A, Hoogeboom-Vlijm R, Lusser A, Dekker C. Dynamics of NAP1-Assisted Nucleosome Assembly Imaged with High-Speed Atomic Force Microscopy Biophysical Journal. 106: 429a. DOI: 10.1016/J.Bpj.2013.11.2416 |
0.345 |
|
| 2014 |
Plesa C, Ruitenberg JW, Witteveen MJ, Dekker C. Detection of Single Proteins Bound along DNA with Solid-State Nanopores Biophysical Journal. 106: 395a. DOI: 10.1016/J.Bpj.2013.11.2230 |
0.796 |
|
| 2014 |
Blosser T, Westra E, Loeff L, Dekker C, Brouns S, Joo C. Defense Against Viral Attack: Single-Molecule View on a Bacterial Adaptive Immune System Biophysical Journal. 106: 22a. DOI: 10.1016/J.Bpj.2013.11.178 |
0.339 |
|
| 2014 |
Wu F, van Schie B, van Rijn E, Keymer JE, Dekker C. Symmetry Breaking and Plasticity of Min Protein Oscillators in Living Bacteria Sculptured into Defined Geometries Biophysical Journal. 106: 188a. DOI: 10.1016/J.Bpj.2013.11.1123 |
0.691 |
|
| 2013 |
Plesa C, Cornelissen L, Tuijtel MW, Dekker C. Non-equilibrium folding of individual DNA molecules recaptured up to 1000 times in a solid state nanopore. Nanotechnology. 24: 475101. PMID 24177388 DOI: 10.1088/0957-4484/24/47/475101 |
0.791 |
|
| 2013 |
Hol FJ, Galajda P, Nagy K, Woolthuis RG, Dekker C, Keymer JE. Spatial structure facilitates cooperation in a social dilemma: empirical evidence from a bacterial community. Plos One. 8: e77042. PMID 24167557 DOI: 10.1371/Journal.Pone.0077042 |
0.766 |
|
| 2013 |
Schneider GF, Xu Q, Hage S, Luik S, Spoor JN, Malladi S, Zandbergen H, Dekker C. Tailoring the hydrophobicity of graphene for its use as nanopores for DNA translocation. Nature Communications. 4: 2619. PMID 24126320 DOI: 10.1038/Ncomms3619 |
0.304 |
|
| 2013 |
van Loenhout MT, De Vlaminck I, Flebus B, den Blanken JF, Zweifel LP, Hooning KM, Kerssemakers JW, Dekker C. Scanning a DNA molecule for bound proteins using hybrid magnetic and optical tweezers. Plos One. 8: e65329. PMID 23755219 DOI: 10.1371/Journal.Pone.0065329 |
0.437 |
|
| 2013 |
Jonsson MP, Dekker C. Plasmonic nanopore for electrical profiling of optical intensity landscapes. Nano Letters. 13: 1029-33. PMID 23402575 DOI: 10.1021/Nl304213S |
0.614 |
|
| 2013 |
Plesa C, Kowalczyk SW, Zinsmeester R, Grosberg AY, Rabin Y, Dekker C. Fast translocation of proteins through solid state nanopores Nano Letters. 13: 658-663. PMID 23343345 DOI: 10.1021/Nl3042678 |
0.761 |
|
| 2013 |
Soni GV, Jonsson MP, Dekker C. Periodic modulations of optical tweezers near solid-state membranes. Small (Weinheim An Der Bergstrasse, Germany). 9: 679-84. PMID 23129349 DOI: 10.1002/Smll.201201875 |
0.6 |
|
| 2013 |
Plesa C, Kowalczyk SW, Zinsmeester R, Grosberg AY, Rabin Y, Dekker C. Correction to Fast Translocation of Proteins through Solid State Nanopores Nano Letters. 13: 3445-3445. DOI: 10.1021/Nl4019269 |
0.748 |
|
| 2013 |
Vlijm R, Burnham DR, Bernard S, Modesti M, Dekker C. Real Time Visualization of hRPA Binding to Torsionally Controlled Double-Stranded DNA Biophysical Journal. 104: 73a. DOI: 10.1016/J.Bpj.2012.11.442 |
0.386 |
|
| 2013 |
Soni G, Dekker C. Optical Tweezers Controlled Nanopore Detection of Nucleosomes along a DNA Biophysical Journal. 104: 581a. DOI: 10.1016/J.Bpj.2012.11.3225 |
0.424 |
|
| 2012 |
Janssen XJ, Jonsson MP, Plesa C, Soni GV, Dekker C, Dekker NH. Rapid manufacturing of low-noise membranes for nanopore sensors by trans-chip illumination lithography. Nanotechnology. 23: 475302. PMID 23103750 DOI: 10.1088/0957-4484/23/47/475302 |
0.768 |
|
| 2012 |
Vlijm R, Smitshuijzen JS, Lusser A, Dekker C. NAP1-assisted nucleosome assembly on DNA measured in real time by single-molecule magnetic tweezers. Plos One. 7: e46306. PMID 23050009 DOI: 10.1371/Journal.Pone.0046306 |
0.375 |
|
| 2012 |
van Loenhout MT, de Grunt MV, Dekker C. Dynamics of DNA supercoils. Science (New York, N.Y.). 338: 94-7. PMID 22983709 DOI: 10.1126/Science.1225810 |
0.394 |
|
| 2012 |
De Vlaminck I, Henighan T, van Loenhout MT, Burnham DR, Dekker C. Magnetic forces and DNA mechanics in multiplexed magnetic tweezers. Plos One. 7: e41432. PMID 22870220 DOI: 10.1371/Journal.Pone.0041432 |
0.347 |
|
| 2012 |
Kowalczyk SW, Dekker C. Measurement of the docking time of a DNA molecule onto a solid-state nanopore. Nano Letters. 12: 4159-63. PMID 22803839 DOI: 10.1021/Nl301719A |
0.405 |
|
| 2012 |
De Vlaminck I, van Loenhout MT, Zweifel L, den Blanken J, Hooning K, Hage S, Kerssemakers J, Dekker C. Mechanism of homology recognition in DNA recombination from dual-molecule experiments. Molecular Cell. 46: 616-24. PMID 22560720 DOI: 10.1016/J.Molcel.2012.03.029 |
0.399 |
|
| 2012 |
Soni GV, Dekker C. Detection of nucleosomal substructures using solid-state nanopores. Nano Letters. 12: 3180-6. PMID 22554358 DOI: 10.1021/Nl301163M |
0.37 |
|
| 2012 |
Hall AR, Keegstra JM, Duch MC, Hersam MC, Dekker C. Measuring single-wall carbon nanotubes with solid-state nanopores. Methods in Molecular Biology (Clifton, N.J.). 870: 227-39. PMID 22528267 DOI: 10.1007/978-1-61779-773-6_13 |
0.354 |
|
| 2012 |
Männik J, Wu F, Hol FJ, Bisicchia P, Sherratt DJ, Keymer JE, Dekker C. Robustness and accuracy of cell division in Escherichia coli in diverse cell shapes. Proceedings of the National Academy of Sciences of the United States of America. 109: 6957-62. PMID 22509007 DOI: 10.1073/Pnas.1120854109 |
0.776 |
|
| 2012 |
Schneider GF, Dekker C. DNA sequencing with nanopores. Nature Biotechnology. 30: 326-8. PMID 22491281 DOI: 10.1038/Nbt.2181 |
0.357 |
|
| 2012 |
De Vlaminck I, Dekker C. Recent advances in magnetic tweezers. Annual Review of Biophysics. 41: 453-72. PMID 22443989 DOI: 10.1146/Annurev-Biophys-122311-100544 |
0.335 |
|
| 2012 |
Kowalczyk SW, Wells DB, Aksimentiev A, Dekker C. Slowing down DNA translocation through a nanopore in lithium chloride. Nano Letters. 12: 1038-44. PMID 22229707 DOI: 10.1021/Nl204273H |
0.422 |
|
| 2012 |
Kowalczyk SW, Grosberg AY, Rabin Y, Dekker C. Reply to 'Comment on Modeling the conductance and DNA blockade of solid-state nanopores' Nanotechnology. 23. DOI: 10.1088/0957-4484/23/8/088002 |
0.354 |
|
| 2012 |
Burnham DR, De Vlaminck I, Henighan T, van Loenhout MT, Pfeiffer I, Huijts J, Kerssemakers J, van Langen-Suurling A, van der Drift E, Wyman C, Dekker C. Highly Parallel Magnetic Tweezers for the Study of DNA-Protein Interactions Biophysical Journal. 102: 178a. DOI: 10.1016/J.Bpj.2011.11.968 |
0.411 |
|
| 2012 |
Soni G, Wester L, Vlijm R, Dekker C. Nucleosome Detection using Solid State Nanopores Biophysical Journal. 102: 730a. DOI: 10.1016/J.Bpj.2011.11.3960 |
0.415 |
|
| 2012 |
Schneider GF, Xu Q, Song B, Luik S, Kowalczyk S, Calado V, Yue Wu M, Pandraud G, Maldi S, Zandbergen H, Dekker C. Translocating Single-Stranded DNA through Crystalline Graphene Nanopores Biophysical Journal. 102: 728a. DOI: 10.1016/J.Bpj.2011.11.3951 |
0.37 |
|
| 2012 |
Mannik J, Wu F, Hol FJ, Keymer JE, Dekker C. Localization of the Escherichia Coli Divisome by Nucleoid Occlusion and Membrane Curvature Biophysical Journal. 102: 475a. DOI: 10.1016/J.Bpj.2011.11.2605 |
0.778 |
|
| 2012 |
Dekker C. Translocation of DNA-Protein Complexes through Solid-State Nanopores Biophysical Journal. 102: 429a. DOI: 10.1016/J.Bpj.2011.11.2350 |
0.43 |
|
| 2011 |
De Vlaminck I, Henighan T, van Loenhout MT, Pfeiffer I, Huijts J, Kerssemakers JW, Katan AJ, van Langen-Suurling A, van der Drift E, Wyman C, Dekker C. Highly parallel magnetic tweezers by targeted DNA tethering. Nano Letters. 11: 5489-93. PMID 22017420 DOI: 10.1021/Nl203299E |
0.409 |
|
| 2011 |
Kowalczyk SW, Grosberg AY, Rabin Y, Dekker C. Modeling the conductance and DNA blockade of solid-state nanopores Nanotechnology. 22. PMID 21730759 DOI: 10.1088/0957-4484/22/31/315101 |
0.346 |
|
| 2011 |
Kowalczyk SW, Kapinos L, Blosser TR, Magalhães T, van Nies P, Lim RY, Dekker C. Single-molecule transport across an individual biomimetic nuclear pore complex. Nature Nanotechnology. 6: 433-8. PMID 21685911 DOI: 10.1038/Nnano.2011.88 |
0.321 |
|
| 2011 |
Hall AR, Keegstra JM, Duch MC, Hersam MC, Dekker C. Translocation of single-wall carbon nanotubes through solid-state nanopores. Nano Letters. 11: 2446-50. PMID 21574581 DOI: 10.1021/Nl200873W |
0.366 |
|
| 2011 |
Dekker C, Kowalczyk S, Kapinos L, Lim RY. In Vitro Measurements of Single-Molecule Transport Across an Individual Biomimetic Nuclear Pore Complex Biophysical Journal. 100: 521a. DOI: 10.1016/J.Bpj.2010.12.3048 |
0.323 |
|
| 2011 |
De Vlaminck I, vanLoenhout MT, Zweifel L, den Blanken J, Kerssemakers JW, Hage S, Dekker C. Dual Molecule Assay to Investigate the Mechanics of Homology Search and Recognition in Recombination Biophysical Journal. 100: 10a. DOI: 10.1016/J.Bpj.2010.12.266 |
0.4 |
|
| 2011 |
De Vlaminck I, Yusufzai T, van Loenhout MT, Vidic I, Kanaar R, Lebbink JH, Kadonaga JT, Dekker C. Annealing Helicase HARP: A Single Molecule Study Biophysical Journal. 100: 240a. DOI: 10.1016/J.Bpj.2010.12.1529 |
0.379 |
|
| 2011 |
Mannik J, Wu F, Hol FJ, Keymer JE, Dekker C. Chromatin Distribution Guides Cell Division in E. Coli Biophysical Journal. 100: 192a-193a. DOI: 10.1016/J.Bpj.2010.12.1269 |
0.794 |
|
| 2011 |
Hall A, Scott A, Rotem D, Mehta K, Bayley H, Dekker C. Hybrid Biological/Solid-State Nanopores Biophysical Journal. 100: 168a. DOI: 10.1016/J.Bpj.2010.12.1137 |
0.365 |
|
| 2010 |
Hall AR, Scott A, Rotem D, Mehta KK, Bayley H, Dekker C. Hybrid pore formation by directed insertion of α-haemolysin into solid-state nanopores. Nature Nanotechnology. 5: 874-7. PMID 21113160 DOI: 10.1038/Nnano.2010.237 |
0.378 |
|
| 2010 |
Heller I, Chatoor S, Männik J, Zevenbergen MA, Dekker C, Lemay SG. Influence of electrolyte composition on liquid-gated carbon nanotube and graphene transistors. Journal of the American Chemical Society. 132: 17149-56. PMID 21077655 DOI: 10.1021/Ja104850N |
0.566 |
|
| 2010 |
Schneider GF, Kowalczyk SW, Calado VE, Pandraud G, Zandbergen HW, Vandersypen LM, Dekker C. DNA translocation through graphene nanopores. Nano Letters. 10: 3163-7. PMID 20608744 DOI: 10.1021/Nl102069Z |
0.404 |
|
| 2010 |
Heller I, Chatoor S, Männik J, Zevenbergen MA, Oostinga JB, Morpurgo AF, Dekker C, Lemay SG. Charge noise in graphene transistors. Nano Letters. 10: 1563-7. PMID 20373788 DOI: 10.1021/Nl903665G |
0.536 |
|
| 2010 |
Kowalczyk SW, Tuijtel MW, Donkers SP, Dekker C. Unraveling single-stranded DNA in a solid-state nanopore. Nano Letters. 10: 1414-20. PMID 20235508 DOI: 10.1021/Nl100271C |
0.427 |
|
| 2010 |
van den Hout M, Hall AR, Wu MY, Zandbergen HW, Dekker C, Dekker NH. Controlling nanopore size, shape and stability. Nanotechnology. 21: 115304. PMID 20173233 DOI: 10.1088/0957-4484/21/11/115304 |
0.318 |
|
| 2010 |
Stein D, Deurvorst Z, van der Heyden FH, Koopmans WJ, Gabel A, Dekker C. Electrokinetic concentration of DNA polymers in nanofluidic channels. Nano Letters. 10: 765-72. PMID 20151696 DOI: 10.1021/Nl902228P |
0.57 |
|
| 2010 |
Kowalczyk SW, Hall AR, Dekker C. Detection of local protein structures along DNA using solid-state nanopores. Nano Letters. 10: 324-8. PMID 19902919 DOI: 10.1021/Nl903631M |
0.453 |
|
| 2010 |
Mannik J, Galajda P, Keymer JE, Dekker C. Morphogenesis and Cell Division of E. Coli Under Mechanical Confinement Biophysical Journal. 98: 416a-417a. DOI: 10.1016/J.Bpj.2009.12.2249 |
0.679 |
|
| 2009 |
Hall AR, van Dorp S, Lemay SG, Dekker C. Electrophoretic force on a protein-coated DNA molecule in a solid-state nanopore. Nano Letters. 9: 4441-5. PMID 19780587 DOI: 10.1021/Nl9027318 |
0.642 |
|
| 2009 |
Männik J, Driessen R, Galajda P, Keymer JE, Dekker C. Bacterial growth and motility in sub-micron constrictions. Proceedings of the National Academy of Sciences of the United States of America. 106: 14861-6. PMID 19706420 DOI: 10.1073/Pnas.0907542106 |
0.663 |
|
| 2009 |
Heller I, Smaal WT, Lemay SG, Dekker C. Probing macrophage activity with carbon-nanotube sensors. Small (Weinheim An Der Bergstrasse, Germany). 5: 2528-32. PMID 19697305 DOI: 10.1002/Smll.200900823 |
0.58 |
|
| 2009 |
Skinner GM, van den Hout M, Broekmans O, Dekker C, Dekker NH. Distinguishing single- and double-stranded nucleic acid molecules using solid-state nanopores. Nano Letters. 9: 2953-60. PMID 19537802 DOI: 10.1021/Nl901370W |
0.355 |
|
| 2009 |
Keyser UF, van der Does J, Dekker C, Dekker NH. Inserting and manipulating DNA in a nanopore with optical tweezers Methods in Molecular Biology (Clifton, N.J.). 544: 95-112. PMID 19488696 DOI: 10.1007/978-1-59745-483-4_8 |
0.338 |
|
| 2009 |
van Loenhout MT, van der Heijden T, Kanaar R, Wyman C, Dekker C. Dynamics of RecA filaments on single-stranded DNA. Nucleic Acids Research. 37: 4089-99. PMID 19429893 DOI: 10.1093/Nar/Gkp326 |
0.423 |
|
| 2009 |
Wu MY, Smeets RM, Zandbergen M, Ziese U, Krapf D, Batson PE, Dekker NH, Dekker C, Zandbergen HW. Control of shape and material composition of solid-state nanopores. Nano Letters. 9: 479-84. PMID 19143508 DOI: 10.1021/Nl803613S |
0.583 |
|
| 2009 |
Heller I, Männik J, Lemay SG, Dekker C. Optimizing the signal-to-noise ratio for biosensing with carbon nanotube transistors. Nano Letters. 9: 377-82. PMID 19072626 DOI: 10.1021/Nl8031636 |
0.558 |
|
| 2009 |
Smeets RM, Kowalczyk SW, Hall AR, Dekker NH, Dekker C. Translocation of RecA-coated double-stranded DNA through solid-state nanopores. Nano Letters. 9: 3089-96. PMID 19053490 DOI: 10.1021/Nl803189K |
0.41 |
|
| 2009 |
Van Dorp S, Keyser UF, Dekker NH, Dekker C, Lemay SG. Origin of the electrophoretic force on DNA in solid-state nanopores Nature Physics. 5: 347-351. DOI: 10.1038/Nphys1230 |
0.631 |
|
| 2009 |
Kowalczyk SW, Smeets RM, Hall AR, Dekker NH, Dekker C. Static and Dynamic Investigations of RecA-DNA Complex with a Solid-State Nanopore Biophysical Journal. 96: 649a. DOI: 10.1016/J.Bpj.2008.12.3858 |
0.452 |
|
| 2009 |
van den Hout M, Skinner GM, Broekmans OD, Dekker C, Dekker NH. Salt Dependence Of RNA Translocations Through Solid State Nanopores Biophysical Journal. 96: 645a. DOI: 10.1016/J.Bpj.2008.12.3837 |
0.323 |
|
| 2009 |
Dekker C. Nanostructures For Studying The Physics Of Biomolecules And Cells Biophysical Journal. 96: 552a. DOI: 10.1016/J.Bpj.2008.12.2997 |
0.395 |
|
| 2009 |
Skinner GM, van den Hout M, Broekmans O, Dekker C, Dekker NH. Probing the Structural Properties of RNA using Solid-State Nanopores Biophysical Journal. 96: 544a. DOI: 10.1016/J.Bpj.2008.12.2946 |
0.401 |
|
| 2009 |
Heller I, Chatoor S, Männik J, Zevenbergen MAG, Dekker C, Lemay SG. Comparing the weak and strong gate-coupling regimes for nanotube and graphene transistors Physica Status Solidi - Rapid Research Letters. 3: 190-192. DOI: 10.1002/Pssr.200903157 |
0.559 |
|
| 2008 |
Hoeben FJ, Meijer FS, Dekker C, Albracht SP, Heering HA, Lemay SG. Toward single-enzyme molecule electrochemistry: [NiFe]-hydrogenase protein film voltammetry at nanoelectrodes. Acs Nano. 2: 2497-504. PMID 19206284 DOI: 10.1021/Nn800518D |
0.574 |
|
| 2008 |
Sisáková E, Weiserová M, Dekker C, Seidel R, Szczelkun MD. The interrelationship of helicase and nuclease domains during DNA translocation by the molecular motor EcoR124I. Journal of Molecular Biology. 384: 1273-86. PMID 18952104 DOI: 10.1016/J.Jmb.2008.10.017 |
0.357 |
|
| 2008 |
Bonthuis DJ, Meyer C, Stein D, Dekker C. Conformation and dynamics of DNA confined in slitlike nanofluidic channels. Physical Review Letters. 101: 108303. PMID 18851263 DOI: 10.1103/Physrevlett.101.108303 |
0.557 |
|
| 2008 |
van den Hout M, Hage S, Dekker C, Dekker NH. End-joining long nucleic acid polymers Nucleic Acids Research. 36. PMID 18658247 DOI: 10.1093/Nar/Gkn442 |
0.343 |
|
| 2008 |
van der Heijden T, Dekker C. Monte carlo simulations of protein assembly, disassembly, and linear motion on DNA. Biophysical Journal. 95: 4560-9. PMID 18658217 DOI: 10.1529/Biophysj.108.135061 |
0.391 |
|
| 2008 |
van der Heijden T, Modesti M, Hage S, Kanaar R, Wyman C, Dekker C. Homologous recombination in real time: DNA strand exchange by RecA. Molecular Cell. 30: 530-8. PMID 18498754 DOI: 10.1016/J.Molcel.2008.03.010 |
0.42 |
|
| 2008 |
Hoeben FJ, Heller I, Albracht SP, Dekker C, Lemay SG, Heering HA. Polymyxin-coated Au and carbon nanotube electrodes for stable [NiFe]-hydrogenase film voltammetry. Langmuir : the Acs Journal of Surfaces and Colloids. 24: 5925-31. PMID 18459755 DOI: 10.1021/La703984Z |
0.568 |
|
| 2008 |
Seidel R, Bloom JG, Dekker C, Szczelkun MD. Motor step size and ATP coupling efficiency of the dsDNA translocase EcoR124I. The Embo Journal. 27: 1388-98. PMID 18388857 DOI: 10.1038/Emboj.2008.69 |
0.324 |
|
| 2008 |
Männik J, Heller I, Janssens AM, Lemay SG, Dekker C. Charge noise in liquid-gated single-wall carbon nanotube transistors. Nano Letters. 8: 685-8. PMID 18217786 DOI: 10.1021/Nl073271H |
0.565 |
|
| 2008 |
Heller I, Janssens AM, Männik J, Minot ED, Lemay SG, Dekker C. Identifying the mechanism of biosensing with carbon nanotube transistors. Nano Letters. 8: 591-5. PMID 18162002 DOI: 10.1021/Nl072996I |
0.582 |
|
| 2008 |
Van Den Heuvel MGL, Bondesan R, Lagomarsino MC, Dekker C. Single-molecule observation of anomalous electrohydrodynamic orientation of microtubules Physical Review Letters. 101. DOI: 10.1103/Physrevlett.101.118301 |
0.303 |
|
| 2007 |
Dekker C. Solid-state nanopores. Nature Nanotechnology. 2: 209-15. PMID 18654264 DOI: 10.1038/Nnano.2007.27 |
0.355 |
|
| 2007 |
van der Heijden T, Seidel R, Modesti M, Kanaar R, Wyman C, Dekker C. Real-time assembly and disassembly of human RAD51 filaments on individual DNA molecules. Nucleic Acids Research. 35: 5646-57. PMID 17709342 DOI: 10.1093/Nar/Gkm629 |
0.417 |
|
| 2007 |
LeRoy BJ, Heller I, Pahilwani VK, Dekker C, Lemay SG. Simultaneous electrical transport and scanning tunneling spectroscopy of carbon nanotubes. Nano Letters. 7: 2937-41. PMID 17559287 DOI: 10.1021/Nl0708112 |
0.585 |
|
| 2007 |
Modesti M, Ristic D, van der Heijden T, Dekker C, van Mameren J, Peterman EJ, Wuite GJ, Kanaar R, Wyman C. Fluorescent human RAD51 reveals multiple nucleation sites and filament segments tightly associated along a single DNA molecule. Structure (London, England : 1993). 15: 599-609. PMID 17502105 DOI: 10.1016/J.Str.2007.04.003 |
0.423 |
|
| 2007 |
Van Den Heuvel MGL, De Graaff MP, Lemay SG, Dekker C. Electrophoresis of individual microtubules in microchannels Proceedings of the National Academy of Sciences of the United States of America. 104: 7770-7775. PMID 17470799 DOI: 10.1073/Pnas.0608316104 |
0.564 |
|
| 2007 |
van der Heyden FH, Bonthuis DJ, Stein D, Meyer C, Dekker C. Power generation by pressure-driven transport of ions in nanofluidic channels. Nano Letters. 7: 1022-5. PMID 17352506 DOI: 10.1021/Nl070194H |
0.478 |
|
| 2007 |
Seidel R, Dekker C. Single-molecule studies of nucleic acid motors. Current Opinion in Structural Biology. 17: 80-6. PMID 17207989 DOI: 10.1016/J.Sbi.2006.12.003 |
0.305 |
|
| 2007 |
Minot ED, Janssens AM, Heller I, Heering HA, Dekker C, Lemay SG. Carbon nanotube biosensors: The critical role of the reference electrode Applied Physics Letters. 91. DOI: 10.1063/1.2775090 |
0.572 |
|
| 2007 |
Van Der Heijden T, Moreno-Herrero F, Kanaar R, Wyman C, Dekker C. AFM tip-induced dissociation of RecA-dsDNA filaments Nano Letters. 7: 1112. DOI: 10.1021/Nl070385K |
0.361 |
|
| 2006 |
Wiggins PA, van der Heijden T, Moreno-Herrero F, Spakowitz A, Phillips R, Widom J, Dekker C, Nelson PC. High flexibility of DNA on short length scales probed by atomic force microscopy. Nature Nanotechnology. 1: 137-41. PMID 18654166 DOI: 10.1038/Nnano.2006.63 |
0.404 |
|
| 2006 |
van der Heijden T, Moreno-Herrero F, Kanaar R, Wyman C, Dekker C. Comment on "Direct and real-time visualization of the disassembly of a single RecA-DNA-ATPgammaS complex using AFM imaging in fluid". Nano Letters. 6: 3000-2. PMID 17163748 DOI: 10.1021/Nl061746J |
0.368 |
|
| 2006 |
Krapf D, Quinn BM, Wu MY, Zandbergen HW, Dekker C, Lemay SG. Experimental observation of nonlinear ionic transport at the nanometer scale. Nano Letters. 6: 2531-5. PMID 17090086 DOI: 10.1021/Nl0619453 |
0.695 |
|
| 2006 |
Stein D, van der Heyden FH, Koopmans WJ, Dekker C. Pressure-driven transport of confined DNA polymers in fluidic channels. Proceedings of the National Academy of Sciences of the United States of America. 103: 15853-8. PMID 17047033 DOI: 10.1073/Pnas.0605900103 |
0.559 |
|
| 2006 |
van der Heyden FH, Bonthuis DJ, Stein D, Meyer C, Dekker C. Electrokinetic energy conversion efficiency in nanofluidic channels. Nano Letters. 6: 2232-7. PMID 17034089 DOI: 10.1021/Nl061524L |
0.469 |
|
| 2006 |
van der Heyden FH, Stein D, Besteman K, Lemay SG, Dekker C. Charge inversion at high ionic strength studied by streaming currents. Physical Review Letters. 96: 224502. PMID 16803311 DOI: 10.1103/Physrevlett.96.224502 |
0.631 |
|
| 2006 |
Heller I, Kong J, Williams KA, Dekker C, Lemay SG. Electrochemistry at single-walled carbon nanotubes: the role of band structure and quantum capacitance. Journal of the American Chemical Society. 128: 7353-9. PMID 16734491 DOI: 10.1021/Ja061212K |
0.581 |
|
| 2006 |
Stanley LK, Seidel R, van der Scheer C, Dekker NH, Szczelkun MD, Dekker C. When a helicase is not a helicase: dsDNA tracking by the motor protein EcoR124I. The Embo Journal. 25: 2230-9. PMID 16642041 DOI: 10.1038/Sj.Emboj.7601104 |
0.379 |
|
| 2006 |
Krapf D, Wu MY, Smeets RM, Zandbergen HW, Dekker C, Lemay SG. Fabrication and characterization of nanopore-based electrodes with radii down to 2 nm. Nano Letters. 6: 105-9. PMID 16402796 DOI: 10.1021/Nl052163X |
0.707 |
|
| 2006 |
Smeets RM, Keyser UF, Krapf D, Wu MY, Dekker NH, Dekker C. Salt dependence of ion transport and DNA translocation through solid-state nanopores. Nano Letters. 6: 89-95. PMID 16402793 DOI: 10.1021/Nl052107W |
0.632 |
|
| 2006 |
Keyser UF, Van Der Does J, Dekker C, Dekker NH. Optical tweezers for force measurements on DNA in nanopores Review of Scientific Instruments. 77. DOI: 10.1063/1.2358705 |
0.398 |
|
| 2006 |
Keyser UF, Koeleman BN, Van Dorp S, Krapf D, Smeets RMM, Lemay SG, Dekker NH, Dekker C. Direct force measurements on DNA in a solid-state nanopore Nature Physics. 2: 473-477. DOI: 10.1038/Nphys344 |
0.753 |
|
| 2005 |
Seidel R, Bloom JG, van Noort J, Dutta CF, Dekker NH, Firman K, Szczelkun MD, Dekker C. Dynamics of initiation, termination and reinitiation of DNA translocation by the motor protein EcoR124I. The Embo Journal. 24: 4188-97. PMID 16292342 DOI: 10.1038/Sj.Emboj.7600881 |
0.351 |
|
| 2005 |
Keyser UF, Krapf D, Koeleman BN, Smeets RM, Dekker NH, Dekker C. Nanopore tomography of a laser focus. Nano Letters. 5: 2253-6. PMID 16277463 DOI: 10.1021/Nl051597P |
0.571 |
|
| 2005 |
Moreno-Herrero F, Holtzer L, Koster DA, Shuman S, Dekker C, Dekker NH. Atomic force microscopy shows that vaccinia topoisomerase IB generates filaments on DNA in a cooperative fashion Nucleic Acids Research. 33: 5945-5953. PMID 16237128 DOI: 10.1093/Nar/Gki906 |
0.423 |
|
| 2005 |
van der Heyden FH, Stein D, Dekker C. Streaming currents in a single nanofluidic channel. Physical Review Letters. 95: 116104. PMID 16197024 DOI: 10.1103/Physrevlett.95.116104 |
0.487 |
|
| 2005 |
Storm AJ, Storm C, Chen J, Zandbergen H, Joanny JF, Dekker C. Fast DNA translocation through a solid-state nanopore. Nano Letters. 5: 1193-7. PMID 16178209 DOI: 10.1021/Nl048030D |
0.403 |
|
| 2005 |
Moreno-Herrero F, de Jager M, Dekker NH, Kanaar R, Wyman C, Dekker C. Mesoscale conformational changes in the DNA-repair complex Rad50/Mre11/Nbs1 upon binding DNA. Nature. 437: 440-3. PMID 16163361 DOI: 10.1038/Nature03927 |
0.385 |
|
| 2005 |
Storm AJ, Chen JH, Zandbergen HW, Dekker C. Translocation of double-strand DNA through a silicon oxide nanopore. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 71: 051903. PMID 16089567 DOI: 10.1103/Physreve.71.051903 |
0.417 |
|
| 2005 |
Ristic D, Modesti M, van der Heijden T, van Noort J, Dekker C, Kanaar R, Wyman C. Human Rad51 filaments on double- and single-stranded DNA: correlating regular and irregular forms with recombination function. Nucleic Acids Research. 33: 3292-302. PMID 15944450 DOI: 10.1093/Nar/Gki640 |
0.427 |
|
| 2005 |
Quinn BM, Dekker C, Lemay SG. Electrodeposition of noble metal nanoparticles on carbon nanotubes. Journal of the American Chemical Society. 127: 6146-7. PMID 15853300 DOI: 10.1021/Ja0508828 |
0.546 |
|
| 2005 |
van der Heijden T, van Noort J, van Leest H, Kanaar R, Wyman C, Dekker NH, Dekker N, Dekker C. Torque-limited RecA polymerization on dsDNA. Nucleic Acids Research. 33: 2099-105. PMID 15824062 DOI: 10.1093/Nar/Gki512 |
0.414 |
|
| 2005 |
Koster DA, Croquette V, Dekker C, Shuman S, Dekker NH. Friction and torque govern the relaxation of DNA supercoils by eukaryotic topoisomerase IB. Nature. 434: 671-4. PMID 15800630 DOI: 10.1038/Nature03395 |
0.409 |
|
| 2005 |
van den Heuvel MG, Butcher CT, Lemay SG, Diez S, Dekker C. Electrical docking of microtubules for kinesin-driven motility in nanostructures. Nano Letters. 5: 235-41. PMID 15794603 DOI: 10.1021/Nl048291N |
0.561 |
|
| 2005 |
Heller I, Kong J, Heering HA, Williams KA, Lemay SG, Dekker C. Individual single-walled carbon nanotubes as nanoelectrodes for electrochemistry. Nano Letters. 5: 137-42. PMID 15792427 DOI: 10.1021/Nl048200M |
0.579 |
|
| 2005 |
Lemay SG, van den Broek DM, Storm AJ, Krapf D, Smeets RM, Heering HA, Dekker C. Lithographically fabricated nanopore-based electrodes for electrochemistry. Analytical Chemistry. 77: 1911-5. PMID 15762604 DOI: 10.1021/Ac0489972 |
0.69 |
|
| 2005 |
Abels JA, Moreno-Herrero F, Van Der Heijden T, Dekker C, Dekker NH. Single-molecule measurements of the persistence length of double-stranded RNA Biophysical Journal. 88: 2737-2744. PMID 15653727 DOI: 10.1529/Biophysj.104.052811 |
0.336 |
|
| 2005 |
LeRoy BJ, Kong J, Pahilwani VK, Dekker C, Lemay SG. Three-terminal scanning tunneling spectroscopy of suspended carbon nanotubes Physical Review B - Condensed Matter and Materials Physics. 72. DOI: 10.1103/Physrevb.72.075413 |
0.579 |
|
| 2005 |
Kong J, LeRoy BJ, Lemay SG, Dekker C. Integration of a gate electrode into carbon nanotube devices for scanning tunneling microscopy Applied Physics Letters. 86: 1-3. DOI: 10.1063/1.1883301 |
0.583 |
|
| 2004 |
van Noort J, van der Heijden T, Dutta CF, Firman K, Dekker C. Initiation of translocation by Type I restriction-modification enzymes is associated with a short DNA extrusion. Nucleic Acids Research. 32: 6540-7. PMID 15598825 DOI: 10.1093/Nar/Gkh999 |
0.367 |
|
| 2004 |
Leroy BJ, Lemay SG, Kong J, Dekker C. Electrical generation and absorption of phonons in carbon nanotubes. Nature. 432: 371-4. PMID 15549099 DOI: 10.1038/Nature03046 |
0.575 |
|
| 2004 |
Stein D, Kruithof M, Dekker C. Surface-charge-governed ion transport in nanofluidic channels. Physical Review Letters. 93: 035901. PMID 15323836 DOI: 10.1103/Physrevlett.93.035901 |
0.477 |
|
| 2004 |
Seidel R, van Noort J, van der Scheer C, Bloom JG, Dekker NH, Dutta CF, Blundell A, Robinson T, Firman K, Dekker C. Real-time observation of DNA translocation by the type I restriction modification enzyme EcoR124I. Nature Structural & Molecular Biology. 11: 838-43. PMID 15300241 DOI: 10.1038/Nsmb816 |
0.407 |
|
| 2004 |
van Noort J, Verbrugge S, Goosen N, Dekker C, Dame RT. Dual architectural roles of HU: formation of flexible hinges and rigid filaments. Proceedings of the National Academy of Sciences of the United States of America. 101: 6969-74. PMID 15118104 DOI: 10.1073/Pnas.0308230101 |
0.417 |
|
| 2004 |
LeRoy BJ, Lemay SG, Kong J, Dekker C. Erratum: “Scanning tunneling spectroscopy of suspended single-wall carbon nanotubes” [Appl. Phys. Lett. 84, 4280 (2004)] Applied Physics Letters. 85: 4246-4246. DOI: 10.1063/1.1808489 |
0.515 |
|
| 2004 |
LeRoy BJ, Lemay SG, Kong J, Dekker C. Scanning tunneling spectroscopy of suspended single-wall carbon nanotubes Applied Physics Letters. 84: 4280-4282. DOI: 10.1063/1.1748836 |
0.58 |
|
| 2003 |
van Noort J, van Der Heijden T, de Jager M, Wyman C, Kanaar R, Dekker C. The coiled-coil of the human Rad50 DNA repair protein contains specific segments of increased flexibility. Proceedings of the National Academy of Sciences of the United States of America. 100: 7581-6. PMID 12805565 DOI: 10.1073/Pnas.1330706100 |
0.371 |
|
| 2003 |
Maltezopoulos T, Kubetzka A, Morgenstern M, Wiesendanger R, Lemay SG, Dekker C. Direct observation of confined states in metallic single-walled carbon nanotubes Applied Physics Letters. 83: 1011-1013. DOI: 10.1063/1.1598282 |
0.578 |
|
| 2002 |
Williams KA, Veenhuizen PT, de la Torre BG, Eritja R, Dekker C. Nanotechnology: carbon nanotubes with DNA recognition. Nature. 420: 761. PMID 12490938 DOI: 10.1038/420761A |
0.398 |
|
| 2002 |
Thorwart M, Grifoni M, Cuniberti G, Postma HW, Dekker C. Correlated tunneling in intramolecular carbon nanotube quantum dots. Physical Review Letters. 89: 196402. PMID 12443136 DOI: 10.1103/Physrevlett.89.196402 |
0.742 |
|
| 2002 |
Cuniberti G, Craco L, Porath D, Dekker C. Backbone-induced semiconducting behavior in shortDNAwires Physical Review B. 65. DOI: 10.1103/Physrevb.65.241314 |
0.371 |
|
| 2002 |
Janssen JW, Lemay SG, Kouwenhoven LP, Dekker C. Scanning tunneling spectroscopy on crossed carbon nanotubes Physical Review B. 65. DOI: 10.1103/Physrevb.65.115423 |
0.587 |
|
| 2002 |
Williams KA, Veenhuizen PTM, Torre BGdl, Eritja R, Dekker C. Towards DNA‐Mediated Self Assembly of Carbon Nanotube Molecular Devices Structural and Electronic Properties of Molecular Nanostructures. Xvi International Winterschool On Electronic Properties of Novel Materials. 633: 444-448. DOI: 10.1063/1.1514159 |
0.367 |
|
| 2001 |
De Jager M, Van Noort J, Van Gent DC, Dekker C, Kanaar R, Wyman C. Human Rad50/Mre11 is a flexible complex that can tether DNA ends Molecular Cell. 8: 1129-1135. PMID 11741547 DOI: 10.1016/S1097-2765(01)00381-1 |
0.362 |
|
| 2001 |
Lemay SG, Janssen JW, van den Hout M, Mooij M, Bronikowski MJ, Willis PA, Smalley RE, Kouwenhoven LP, Dekker C. Two-dimensional imaging of electronic wavefunctions in carbon nanotubes. Nature. 412: 617-20. PMID 11493914 DOI: 10.1038/35088013 |
0.546 |
|
| 2001 |
Postma HW, Teepen T, Yao Z, Grifoni M, Dekker C. Carbon nanotube single-electron transistors at room temperature. Science (New York, N.Y.). 293: 76-9. PMID 11441175 DOI: 10.1126/Science.1061797 |
0.762 |
|
| 2001 |
Dekker C, Ratner M. Electronic properties of DNA Physics World. 14: 29-33. DOI: 10.1088/2058-7058/14/8/33 |
0.404 |
|
| 2001 |
Storm AJ, Van Noort J, De Vries S, Dekker C. Insulating behavior for DNA molecules between nanoelectrodes at the 100 nm length scale Applied Physics Letters. 79: 3881-3883. DOI: 10.1063/1.1421086 |
0.427 |
|
| 2000 |
Porath D, Bezryadin A, de Vries S, Dekker C. Direct measurement of electrical transport through DNA molecules. Nature. 403: 635-8. PMID 10688194 DOI: 10.1038/35001029 |
0.695 |
|
| 2000 |
Postma HWC, De Jonge M, Yao Z, Dekker C. Electrical transport through carbon nanotube junctions created by mechanical manipulation Physical Review B - Condensed Matter and Materials Physics. 62: R10653-R10656. DOI: 10.1103/Physrevb.62.R10653 |
0.321 |
|
| 2000 |
Venema LC, Janssen JW, Buitelaar MR, Wildöer JWG, Lemay SG, Kouwenhoven LP, Dekker C. Spatially resolved scanning tunneling spectroscopy on single-walled carbon nanotubes Physical Review B. 62: 5238-5244. DOI: 10.1103/Physrevb.62.5238 |
0.583 |
|
| 1999 |
Zhen Y, Postma HWC, Balents L, Dekker C. Carbon nanotube intramolecular junctions Nature. 402: 273-276. DOI: 10.1038/46241 |
0.323 |
|
| 1998 |
Bezryadin A, Verschueren ARM, Tans SJ, Dekker C. Multiprobe Transport Experiments on Individual Single-Wall Carbon Nanotubes Physical Review Letters. 80: 4036-4039. DOI: 10.1103/Physrevlett.80.4036 |
0.653 |
|
| 1998 |
Wildöer JWG, Venema LC, Rinzler AG, Smalley RE, Dekker C. Electronic structure of atomically resolved carbon nanotubes Nature. 391: 59-62. DOI: 10.1038/34139 |
0.313 |
|
| 1998 |
Tans SJ, Verschueren ARM, Dekker C. Room-temperature transistor based on a single carbon nanotube Nature. 393: 49-52. DOI: 10.1038/29954 |
0.332 |
|
| 1998 |
Tans SJ, Devoret MH, Groeneveld RJA, Dekker C. Electron-electron correlations in carbon manotubes Nature. 394: 761-764. DOI: 10.1038/29494 |
0.305 |
|
| 1997 |
Venema LC, Wildöer JWG, Temminck Tuinstra HLJ, Dekker C, Rinzler AG, Smalley RE. Length control of individual carbon nanotubes by nanostructuring with a scanning tunneling microscope Applied Physics Letters. 71: 2629-2631. DOI: 10.1063/1.120161 |
0.311 |
|
| 1997 |
Bezryadin A, Dekker C, Schmid G. Electrostatic trapping of single conducting nanoparticles between nanoelectrodes Applied Physics Letters. 71: 1273-1275. DOI: 10.1063/1.119871 |
0.628 |
|
| 1997 |
Tans SJ, Devoret MH, Dai H, Thess A, Smalley RE, Geerligs LJ, Dekker C. Individual single-wall carbon nanotubes as quantum wires Nature. 386: 474-477. DOI: 10.1038/386474A0 |
0.317 |
|
| 1997 |
Dekker C, Tans S, Oberndorff B, Meyer R, Venema L. STM imaging and spectroscopy of single copperphthalocyanine molecules Synthetic Metals. 84: 853-854. DOI: 10.1016/S0379-6779(96)04179-3 |
0.303 |
|
| 1997 |
Tans S, Miedema R, Geerligs L, Dekker C, Wu J, Wegner G. Electrical transport in monolayers of phthalocyanine molecular wires and afm imaging of a single wire bridging two electrodes Synthetic Metals. 84: 733-734. DOI: 10.1016/S0379-6779(96)04121-5 |
0.308 |
|
| 1995 |
Wöltgens PJM, Dekker C, Gielkens SWA, de Wijn HW. Voltage noise of YBa2Cu3O7-δ films in the vortex-liquid phase Physica C: Superconductivity and Its Applications. 247: 67-73. DOI: 10.1016/0921-4534(95)00195-6 |
0.633 |
|
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