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Wenqing Shui, Ph.D. - Publications

Affiliations: 
2009 University of California, Berkeley, Berkeley, CA, United States 
Area:
Bioorthogonal chemistry
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42 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Lu Y, Qin S, Zhang B, Dai A, Cai X, Ma M, Gao ZG, Yang D, Stevens RC, Jacobson KA, Wang MW, Shui W. Correction to Accelerating the Throughput of Affinity Mass Spectrometry-Based Ligand Screening toward a G Protein-Coupled Receptor. Analytical Chemistry. PMID 32125824 DOI: 10.1021/Acs.Analchem.0C00754  0.335
2020 Zhang B, Zhao S, Yang D, Wu Y, Xin Y, Cao H, Huang XP, Cai X, Sun W, Ye N, Xu Y, Peng Y, Zhao S, Liu ZJ, Zhong G, ... ... Shui W, et al. A Novel G Protein-Biased and Subtype-Selective Agonist for a G Protein-Coupled Receptor Discovered from Screening Herbal Extracts. Acs Central Science. 6: 213-225. PMID 32123739 DOI: 10.1021/Acscentsci.9B01125  0.33
2020 Lou R, Tang P, Ding K, Li S, Tian C, Li Y, Zhao S, Zhang Y, Shui W. Hybrid Spectral Library Combining DIA-MS Data and a Targeted Virtual Library Substantially Deepens the Proteome Coverage. Iscience. 23: 100903. PMID 32109675 DOI: 10.1016/J.Isci.2020.100903  0.384
2020 Xia L, Ma Z, Tong J, Tang Y, Li S, Qin S, Lou R, Zhao S, Lei X, Shui W. Evaluation of chemical cross-linkers for in-depth structural analysis of G protein-coupled receptors through cross-linking mass spectrometry. Analytica Chimica Acta. 1102: 53-62. PMID 32043996 DOI: 10.1016/J.Aca.2019.12.036  0.345
2019 Li S, Shui W. Systematic mapping of protein-metabolite interactions with mass spectrometry-based techniques. Current Opinion in Biotechnology. 64: 24-31. PMID 31606719 DOI: 10.1016/J.Copbio.2019.09.002  0.384
2019 Lu Y, Qin S, Zhang B, Dai A, Cai X, Ma M, Gao ZG, Yang D, Stevens RC, Jacobson KA, Wang MW, Shui W. Accelerating the Throughput of Affinity Mass Spectrometry-Based Ligand Screening towards a G Protein-Coupled Receptor. Analytical Chemistry. PMID 31094506 DOI: 10.1021/Acs.Analchem.9B00477  0.362
2019 Wang Z, Liang H, Cao H, Zhang B, Li J, Wang W, Qin S, Wang Y, Xuan L, Lai L, Shui W. Efficient ligand discovery from natural herbs by integrating virtual screening, affinity mass spectrometry and targeted metabolomics. The Analyst. PMID 30788466 DOI: 10.1039/C8An02482K  0.339
2019 Li Z, Li Y, Tang YJ, Shui W. Exploiting High-Resolution Mass Spectrometry for Targeted Metabolite Quantification and C-Labeling Metabolism Analysis. Methods in Molecular Biology (Clifton, N.J.). 1859: 171-184. PMID 30421229 DOI: 10.1007/978-1-4939-8757-3_9  0.34
2018 Yang S, Wu Y, Xu TH, de Waal PW, He Y, Pu M, Chen Y, DeBruine ZJ, Zhang B, Zaidi SA, Popov P, Guo Y, Han GW, Lu Y, Suino-Powell K, ... ... Shui W, et al. Crystal structure of the Frizzled 4 receptor in a ligand-free state. Nature. PMID 30135577 DOI: 10.1038/S41586-018-0447-X  0.309
2018 Miao C, Yang Y, Li S, Guo Y, Shui W, Cao Q. Discrimination and quantification of homologous keratins from goat and sheep with dual protease digestion and PRM assays. Journal of Proteomics. PMID 30030164 DOI: 10.1016/J.Jprot.2018.07.010  0.328
2018 Qin S, Meng M, Yang D, Bai W, Lu Y, Peng Y, Song G, Wu Y, Zhou Q, Zhao S, Huang X, McCorvy JD, Cai X, Dai A, Roth BL, ... ... Shui W, et al. High-throughput identification of G protein-coupled receptor modulators through affinity mass spectrometry screening. Chemical Science. 9: 3192-3199. PMID 29732102 DOI: 10.1039/C7Sc04698G  0.37
2018 Li Z, Li Y, Chen W, Cao Q, Guo Y, Wan N, Jiang X, Tang YJ, Wang Q, Shui W. Correction to Integrating MS1 and MS2 Scans in High-Resolution Parallel Reaction Monitoring Assays for Targeted Metabolite Quantification and DynamicC-Labeling Metabolism Analysis. Analytical Chemistry. PMID 29589743 DOI: 10.1021/Acs.Analchem.8B01316  0.305
2018 Peng Y, Zhao S, Wu Y, Cao H, Xu Y, Liu X, Shui W, Cheng J, Zhao S, Shen L, Ma J, Quinn RJ, Stevens RC, Zhong G, Liu ZJ. Identification of natural products as novel ligands for the human 5-HTreceptor. Biophysics Reports. 4: 50-61. PMID 29577069 DOI: 10.1007/S41048-018-0047-1  0.357
2017 Wang X, Li S, Wang H, Shui W, Hu J. Quantitative proteomics reveal proteins enriched in tubular endoplasmic reticulum of Saccharomyces cerevisiae. Elife. 6. PMID 28287394 DOI: 10.7554/Elife.23816  0.362
2017 Wang X, Li S, Wang H, Shui W, Hu J. Author response: Quantitative proteomics reveal proteins enriched in tubular endoplasmic reticulum of Saccharomyces cerevisiae Elife. DOI: 10.7554/Elife.23816.019  0.385
2017 Ma J, Lu Y, Wu D, Peng Y, Loa-Kum-Cheung W, Peng C, Quinn RJ, Shui W, Liu Z. Ligand identification of the adenosine A2A receptor in self-assembled nanodiscs by affinity mass spectrometry Anal. Methods. 9: 5851-5858. DOI: 10.1039/C7Ay01891F  0.31
2016 Su C, Gao X, Yang W, Zhao Y, Fu X, Cui X, Zhang C, Xin L, Ren Y, Li L, Shui W, Yang X, Wei M, Yang J. Phosphorylation of Tudor-SN, a novel substrate of JNK, is involved in the efficient recruitment of Tudor-SN into stress granules. Biochimica Et Biophysica Acta. PMID 28011284 DOI: 10.1016/J.Bbamcr.2016.12.018  0.341
2016 Li S, Cao Q, Xiao W, Guo Y, Yang Y, Duan X, Shui W. Optimization of acquisition and data-processing parameters for improved proteomic quantification by SWATH mass spectrometry. Journal of Proteome Research. PMID 27995803 DOI: 10.1021/Acs.Jproteome.6B00767  0.339
2016 Li Z, Li Y, Chen W, Cao Q, Guo Y, Wan N, Jiang X, Tang YJ, Wang Q, Shui W. Integrating MS1 and MS2 Scans in High-Resolution Parallel Reaction Monitoring Assays for Targeted Metabolite Quantification and Dynamic (13)C-Labeling Metabolism Analysis. Analytical Chemistry. PMID 27966897 DOI: 10.1021/Acs.Analchem.6B03947  0.323
2016 Xiong Y, Guo Y, Xiao W, Cao Q, Li S, Qi X, Zhang Z, Wang Q, Shui W. An NGS-independent strategy for proteome-wide identification of single amino acid polymorphisms by mass spectrometry. Analytical Chemistry. PMID 26810586 DOI: 10.1021/Acs.Analchem.5B04417  0.353
2015 Li Z, Yang A, Li Y, Liu P, Zhang Z, Zhang X, Shui W. Targeted cofactor quantification in metabolically engineered E. coli using solid phase extraction and hydrophilic interaction liquid chromatography-mass spectrometry. Journal of Chromatography. B, Analytical Technologies in the Biomedical and Life Sciences. 1014: 107-115. PMID 26894684 DOI: 10.1016/J.Jchromb.2015.12.037  0.32
2015 Liu N, Xiong Y, Li S, Ren Y, He Q, Gao S, Zhou J, Shui W. New HDAC6-mediated deacetylation sites of tubulin in the mouse brain identified by quantitative mass spectrometry. Scientific Reports. 5: 16869. PMID 26581825 DOI: 10.1038/Srep16869  0.32
2015 He X, Liu Z, He Q, Qin J, Liu N, Zhang L, Li D, Zhou J, Shui W, Liu M. Identification of novel microtubule-binding proteins by taxol-mediated microtubule stabilization and mass spectrometry analysis. Thoracic Cancer. 6: 649-654. PMID 26445615 DOI: 10.1111/1759-7714.12284  0.4
2015 Qin S, Ren Y, Fu X, Shen J, Chen X, Wang Q, Bi X, Liu W, Li L, Liang G, Yang C, Shui W. Multiple ligand detection and affinity measurement by ultrafiltration and mass spectrometry analysis applied to fragment mixture screening. Analytica Chimica Acta. 886: 98-106. PMID 26320641 DOI: 10.1016/J.Aca.2015.06.017  0.314
2015 Liu N, Yun X, Yiran R, Zhang L, He X, Wang X, Liu M, Li D, Shui W, Zhou J. Proteomic Profiling and Functional Characterization of Multiple Post-translational Modifications of Tubulin. Journal of Proteome Research. PMID 26165356 DOI: 10.1021/Acs.Jproteome.5B00308  0.349
2015 Chen X, Qin S, Chen S, Li J, Li L, Wang Z, Wang Q, Lin J, Yang C, Shui W. A ligand-observed mass spectrometry approach integrated into the fragment based lead discovery pipeline. Scientific Reports. 5: 8361. PMID 25666181 DOI: 10.1038/Srep08361  0.329
2015 Zhang L, Liu S, Liu N, Zhang Y, Liu M, Li D, Seto E, Yao TP, Shui W, Zhou J. Proteomic identification and functional characterization of MYH9, Hsc70, and DNAJA1 as novel substrates of HDAC6 deacetylase activity. Protein & Cell. 6: 42-54. PMID 25311840 DOI: 10.1007/S13238-014-0102-8  0.382
2014 Wang Y, Li Z, Liu D, Xu J, Wei X, Yan L, Yang C, Lou Z, Shui W. Assessment of BAK1 activity in different plant receptor-like kinase complexes by quantitative profiling of phosphorylation patterns. Journal of Proteomics. 108: 484-93. PMID 24953020 DOI: 10.1016/J.Jprot.2014.06.009  0.312
2014 Li D, Gao J, Yang Y, Sun L, Suo S, Luo Y, Shui W, Zhou J, Liu M. CYLD coordinates with EB1 to regulate microtubule dynamics and cell migration. Cell Cycle (Georgetown, Tex.). 13: 974-83. PMID 24552808 DOI: 10.4161/Cc.27838  0.342
2014 Liu S, Chen X, Yan Z, Qin S, Xu J, Lin J, Yang C, Shui W. Exploring skyline for both MS(E) -based label-free proteomics and HRMS quantitation of small molecules. Proteomics. 14: 169-80. PMID 24307133 DOI: 10.1002/Pmic.201300352  0.331
2013 Xu J, Wei X, Yan L, Liu D, Ma Y, Guo Y, Peng C, Zhou H, Yang C, Lou Z, Shui W. Identification and functional analysis of phosphorylation residues of the Arabidopsis BOTRYTIS-INDUCED KINASE1. Protein & Cell. 4: 771-81. PMID 24104392 DOI: 10.1007/S13238-013-3053-6  0.314
2013 Chen X, Li L, Chen S, Xu Y, Xia Q, Guo Y, Liu X, Tang Y, Zhang T, Chen Y, Yang C, Shui W. Identification of inhibitors of the antibiotic-resistance target New Delhi metallo-β-lactamase 1 by both nanoelectrospray ionization mass spectrometry and ultrafiltration liquid chromatography/mass spectrometry approaches. Analytical Chemistry. 85: 7957-65. PMID 23863032 DOI: 10.1021/Ac401732D  0.343
2013 Hao J, Li W, Dan J, Ye X, Wang F, Zeng X, Wang L, Wang H, Cheng Y, Liu L, Shui W. Reprogramming- and pluripotency-associated membrane proteins in mouse stem cells revealed by label-free quantitative proteomics. Journal of Proteomics. 86: 70-84. PMID 23615220 DOI: 10.1016/J.Jprot.2013.04.018  0.361
2011 Shui W, Petzold CJ, Redding A, Liu J, Pitcher A, Sheu L, Hsieh TY, Keasling JD, Bertozzi CR. Organelle membrane proteomics reveals differential influence of mycobacterial lipoglycans on macrophage phagosome maturation and autophagosome accumulation. Journal of Proteome Research. 10: 339-48. PMID 21105745 DOI: 10.1021/Pr100688H  0.676
2009 Tang YJ, Shui W, Myers S, Feng X, Bertozzi C, Keasling JD. Central metabolism in Mycobacterium smegmatis during the transition from O2-rich to O2-poor conditions as studied by isotopomer-assisted metabolite analysis. Biotechnology Letters. 31: 1233-40. PMID 19357814 DOI: 10.1007/S10529-009-9991-7  0.43
2009 Wu P, Shui W, Carlson BL, Hu N, Rabuka D, Lee J, Bertozzi CR. Site-specific chemical modification of recombinant proteins produced in mammalian cells by using the genetically encoded aldehyde tag. Proceedings of the National Academy of Sciences of the United States of America. 106: 3000-5. PMID 19202059 DOI: 10.1073/Pnas.0807820106  0.693
2009 Shui W, Gilmore SA, Sheu L, Liu J, Keasling JD, Bertozzi CR. Quantitative proteomic profiling of host-pathogen interactions: the macrophage response to Mycobacterium tuberculosis lipids. Journal of Proteome Research. 8: 282-9. PMID 19053526 DOI: 10.1021/Pr800422E  0.668
2008 Shui W, Sheu L, Liu J, Smart B, Petzold CJ, Hsieh TY, Pitcher A, Keasling JD, Bertozzi CR. Membrane proteomics of phagosomes suggests a connection to autophagy. Proceedings of the National Academy of Sciences of the United States of America. 105: 16952-7. PMID 18971338 DOI: 10.1073/Pnas.0809218105  0.688
2006 Shui W, Fan J, Yang P, Liu C, Zhai J, Lei J, Yan Y, Zhao D, Chen X. Nanopore-based proteolytic reactor for sensitive and comprehensive proteomic analyses. Analytical Chemistry. 78: 4811-9. PMID 16841899 DOI: 10.1021/Ac060116Z  0.389
2005 Fan J, Shui W, Yang P, Wang X, Xu Y, Wang H, Chen X, Zhao D. Mesoporous silica nanoreactors for highly efficient proteolysis. Chemistry (Weinheim An Der Bergstrasse, Germany). 11: 5391-6. PMID 16001450 DOI: 10.1002/Chem.200500060  0.339
2005 Shui W, Liu Y, Fan H, Bao H, Liang S, Yang P, Chen X. Enhancing TOF/TOF-based de novo sequencing capability for high throughput protein identification with amino acid-coded mass tagging. Journal of Proteome Research. 4: 83-90. PMID 15707361 DOI: 10.1021/Pr049850U  0.326
2002 Zhou F, Shui W, Lu Y, Yang P, Guo Y. High accuracy mass measurement of peptides with internal calibration using a dual electrospray ionization sprayer system for protein identification. Rapid Communications in Mass Spectrometry : Rcm. 16: 505-11. PMID 11870887 DOI: 10.1002/Rcm.603  0.335
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