| Year |
Citation |
Score |
| 2018 |
Andasari V, Lü D, Swat M, Feng S, Spill F, Chen L, Luo X, Zaman M, Long M. Computational model of wound healing: EGF secreted by fibroblasts promotes delayed re-epithelialization of epithelial keratinocytes. Integrative Biology : Quantitative Biosciences From Nano to Macro. PMID 30206629 DOI: 10.1039/C8Ib00048D |
0.334 |
|
| 2018 |
Reynolds DS, Bougher KM, Letendre JH, Fitzgerald SF, Gisladottir UO, Grinstaff MW, Zaman MH. Mechanical Confinement via a PEG/Collagen Interpenetrating Network Inhibits Behavior Characteristic of Malignant Cells in the Triple Negative Breast Cancer Cell Line MDA.MB.231. Acta Biomaterialia. PMID 30030173 DOI: 10.1016/J.Actbio.2018.07.032 |
0.344 |
|
| 2018 |
Kim JE, Reynolds DS, Zaman MH, Mak M. Characterization of the mechanical properties of cancer cells in 3D matrices in response to collagen concentration and cytoskeletal inhibitors. Integrative Biology : Quantitative Biosciences From Nano to Macro. PMID 29620778 DOI: 10.1039/C8Ib00044A |
0.371 |
|
| 2017 |
Reynolds DS, Tevis KM, Blessing WA, Colson YL, Zaman MH, Grinstaff MW. Breast Cancer Spheroids Reveal a Differential Cancer Stem Cell Response to Chemotherapeutic Treatment. Scientific Reports. 7: 10382. PMID 28871147 DOI: 10.1038/S41598-017-10863-4 |
0.324 |
|
| 2017 |
Mak M, Anderson S, McDonough MC, Spill F, Kim JE, Boussommier-Calleja A, Zaman MH, Kamm RD. Integrated Analysis of Intracellular Dynamics of MenaINV Cancer Cells in a 3D Matrix. Biophysical Journal. 112: 1874-1884. PMID 28494958 DOI: 10.1016/J.Bpj.2017.03.030 |
0.355 |
|
| 2017 |
Reynolds DS, Tevis KM, Grinstaff MW, Zaman MH. Abstract A19: Chemotherapeutic treatment enriches for cancer stem cell content in breast cancer spheroids Cancer Research. 77. DOI: 10.1158/1538-7445.Epso16-A19 |
0.369 |
|
| 2016 |
Sun M, Zaman MH. Modeling, signaling and cytoskeleton dynamics: integrated modeling-experimental frameworks in cell migration. Wiley Interdisciplinary Reviews. Systems Biology and Medicine. PMID 27863122 DOI: 10.1002/Wsbm.1365 |
0.39 |
|
| 2016 |
Vargas DA, Sun M, Sadykov K, Kukuruzinska MA, Zaman MH. The Integrated Role of Wnt/β-Catenin, N-Glycosylation, and E-Cadherin-Mediated Adhesion in Network Dynamics. Plos Computational Biology. 12: e1005007. PMID 27427963 DOI: 10.1371/Journal.Pcbi.1005007 |
0.317 |
|
| 2016 |
Spill F, Andasari V, Mak M, Kamm RD, Zaman MH. Effects of 3D geometries on cellular gradient sensing and polarization. Physical Biology. 13: 036008. PMID 27345945 DOI: 10.1088/1478-3975/13/3/036008 |
0.359 |
|
| 2016 |
Sun M, Spill F, Zaman MH. A Computational Model of YAP/TAZ Mechanosensing. Biophysical Journal. 110: 2540-50. PMID 27276271 DOI: 10.1016/J.Bpj.2016.04.040 |
0.355 |
|
| 2016 |
Spill F, Reynolds DS, Kamm RD, Zaman MH. Impact of the physical microenvironment on tumor progression and metastasis. Current Opinion in Biotechnology. 40: 41-48. PMID 26938687 DOI: 10.1016/J.Copbio.2016.02.007 |
0.34 |
|
| 2015 |
Mak M, Spill F, Kamm RD, Zaman MH. Single-Cell Migration in Complex Microenvironments: Mechanics and Signaling Dynamics. Journal of Biomechanical Engineering. PMID 26639083 DOI: 10.1115/1.4032188 |
0.392 |
|
| 2015 |
Sharma Y, Vargas DA, Pegoraro AF, Lepzelter D, Weitz DA, Zaman MH. Collective motion of mammalian cell cohorts in 3D. Integrative Biology : Quantitative Biosciences From Nano to Macro. PMID 26549557 DOI: 10.1039/C5Ib00208G |
0.375 |
|
| 2015 |
Mak M, Kim T, Zaman MH, Kamm RD. Multiscale mechanobiology: computational models for integrating molecules to multicellular systems. Integrative Biology : Quantitative Biosciences From Nano to Macro. 7: 1093-108. PMID 26019013 DOI: 10.1039/C5Ib00043B |
0.319 |
|
| 2014 |
Mak M, Kamm RD, Zaman MH. Impact of dimensionality and network disruption on microrheology of cancer cells in 3D environments. Plos Computational Biology. 10: e1003959. PMID 25412385 DOI: 10.1371/Journal.Pcbi.1003959 |
0.364 |
|
| 2014 |
Maffei JS, Srivastava J, Fallica B, Zaman MH. Combinative in vitro studies and computational model to predict 3D cell migration response to drug insult. Integrative Biology : Quantitative Biosciences From Nano to Macro. 6: 957-72. PMID 25174457 DOI: 10.1039/C4Ib00167B |
0.371 |
|
| 2014 |
Lepzelter D, Zaman MH. Modeling persistence in mesenchymal cell motility using explicit fibers. Langmuir : the Acs Journal of Surfaces and Colloids. 30: 5506-9. PMID 24800650 DOI: 10.1021/La404832T |
0.372 |
|
| 2014 |
Bloom AB, Zaman MH. Influence of the microenvironment on cell fate determination and migration. Physiological Genomics. 46: 309-14. PMID 24619520 DOI: 10.1152/Physiolgenomics.00170.2013 |
0.365 |
|
| 2014 |
Charoen KM, Fallica B, Colson YL, Zaman MH, Grinstaff MW. Embedded multicellular spheroids as a biomimetic 3D cancer model for evaluating drug and drug-device combinations. Biomaterials. 35: 2264-71. PMID 24360576 DOI: 10.1016/J.Biomaterials.2013.11.038 |
0.323 |
|
| 2014 |
Sakamoto Y, Prudhomme S, Zaman MH. Modeling of adhesion, protrusion, and contraction coordination for cell migration simulations. Journal of Mathematical Biology. 68: 267-302. PMID 23263301 DOI: 10.1007/S00285-012-0634-6 |
0.393 |
|
| 2014 |
Liu X, Vargas DA, Lü D, Zhang Y, Zaman MH, Long M. Computational modeling of stem cell migration: A mini review Cellular and Molecular Bioengineering. 7: 196-204. DOI: 10.1007/S12195-014-0330-2 |
0.334 |
|
| 2013 |
Schwartz MP, Rogers RE, Singh SP, Lee JY, Loveland SG, Koepsel JT, Witze ES, Montanez-Sauri SI, Sung KE, Tokuda EY, Sharma Y, Everhart LM, Nguyen EH, Zaman MH, Beebe DJ, et al. A quantitative comparison of human HT-1080 fibrosarcoma cells and primary human dermal fibroblasts identifies a 3D migration mechanism with properties unique to the transformed phenotype. Plos One. 8: e81689. PMID 24349113 DOI: 10.1371/Journal.Pone.0081689 |
0.319 |
|
| 2013 |
Chisholm RH, Hughes BD, Landman KA, Zaman MH. Analytic study of three-dimensional single cell migration with and without proteolytic enzymes. Cellular and Molecular Bioengineering. 6. PMID 24348878 DOI: 10.1007/S12195-012-0261-8 |
0.382 |
|
| 2013 |
Katira P, Bonnecaze RT, Zaman MH. Modeling the mechanics of cancer: effect of changes in cellular and extra-cellular mechanical properties. Frontiers in Oncology. 3: 145. PMID 23781492 DOI: 10.3389/Fonc.2013.00145 |
0.361 |
|
| 2013 |
Vargas DA, Bates O, Zaman MH. Computational model to probe cellular mechanics during epithelial-mesenchymal transition. Cells, Tissues, Organs. 197: 435-44. PMID 23774741 DOI: 10.1159/000348415 |
0.33 |
|
| 2013 |
Frascoli F, Hughes BD, Zaman MH, Landman KA. A computational model for collective cellular motion in three dimensions: general framework and case study for cell pair dynamics. Plos One. 8: e59249. PMID 23527148 DOI: 10.1371/Journal.Pone.0059249 |
0.397 |
|
| 2013 |
Harjanto D, Zaman MH. Modeling extracellular matrix reorganization in 3D environments. Plos One. 8: e52509. PMID 23341900 DOI: 10.1371/Journal.Pone.0052509 |
0.381 |
|
| 2012 |
Fallica B, Maffei JS, Villa S, Makin G, Zaman M. Alteration of Cellular Behavior and Response to PI3K Pathway Inhibition by Culture in 3D Collagen Gels Plos One. 7. PMID 23110163 DOI: 10.1371/Journal.Pone.0048024 |
0.36 |
|
| 2012 |
Katira P, Zaman MH, Bonnecaze RT. How changes in cell mechanical properties induce cancerous behavior. Physical Review Letters. 108: 028103. PMID 22324713 DOI: 10.1103/Physrevlett.108.028103 |
0.362 |
|
| 2012 |
Lepzelter D, Bates O, Zaman M. Integrin clustering in two and three dimensions. Langmuir : the Acs Journal of Surfaces and Colloids. 28: 5379-86. PMID 22204631 DOI: 10.1021/La203725A |
0.313 |
|
| 2011 |
Harjanto D, Maffei JS, Zaman MH. Quantitative analysis of the effect of cancer invasiveness and collagen concentration on 3D matrix remodeling. Plos One. 6: e24891. PMID 21980363 DOI: 10.1371/Journal.Pone.0024891 |
0.369 |
|
| 2011 |
Sakamoto Y, Prudhomme S, Zaman MH. Viscoelastic gel-strip model for the simulation of migrating cells. Annals of Biomedical Engineering. 39: 2735-49. PMID 21800204 DOI: 10.1007/S10439-011-0360-Z |
0.397 |
|
| 2011 |
Baker EL, Srivastava J, Yu D, Bonnecaze RT, Zaman MH. Cancer cell migration: integrated roles of matrix mechanics and transforming potential. Plos One. 6: e20355. PMID 21647371 DOI: 10.1371/Journal.Pone.0020355 |
0.368 |
|
| 2011 |
Tambe DT, Hardin CC, Angelini TE, Rajendran K, Park CY, Serra-Picamal X, Zhou EH, Zaman MH, Butler JP, Weitz DA, Fredberg JJ, Trepat X. Collective cell guidance by cooperative intercellular forces. Nature Materials. 10: 469-75. PMID 21602808 DOI: 10.1038/Nmat3025 |
0.33 |
|
| 2011 |
Vargas DA, Zaman MH. Computational model for migration of a cell cluster in three-dimensional matrices. Annals of Biomedical Engineering. 39: 2068-79. PMID 21424851 DOI: 10.1007/S10439-011-0290-9 |
0.371 |
|
| 2011 |
Fallica B, Makin G, Zaman MH. Bioengineering approaches to study multidrug resistance in tumor cells. Integrative Biology : Quantitative Biosciences From Nano to Macro. 3: 529-39. PMID 21387035 DOI: 10.1039/C0Ib00142B |
0.318 |
|
| 2011 |
Katira P, Zaman MH, Bonnecaze RT. Discrete 3-Dimensional Modeling of Tumor Cell Growth and Migration Biophysical Journal. 100: 443a. DOI: 10.1016/J.Bpj.2010.12.2608 |
0.349 |
|
| 2010 |
Baker EL, Lu J, Yu D, Bonnecaze RT, Zaman MH. Cancer cell stiffness: integrated roles of three-dimensional matrix stiffness and transforming potential. Biophysical Journal. 99: 2048-57. PMID 20923638 DOI: 10.1016/J.Bpj.2010.07.051 |
0.334 |
|
| 2010 |
Schwartz MP, Fairbanks BD, Rogers RE, Rangarajan R, Zaman MH, Anseth KS. A synthetic strategy for mimicking the extracellular matrix provides new insight about tumor cell migration. Integrative Biology : Quantitative Biosciences From Nano to Macro. 2: 32-40. PMID 20473410 DOI: 10.1039/B912438A |
0.345 |
|
| 2010 |
Harjanto D, Zaman MH. Computational study of proteolysis-driven single cell migration in a three-dimensional matrix. Annals of Biomedical Engineering. 38: 1815-25. PMID 20195760 DOI: 10.1007/S10439-010-9970-0 |
0.35 |
|
| 2010 |
Harjanto D, Zaman MH. Matrix mechanics and receptor-ligand interactions in cell adhesion. Organic & Biomolecular Chemistry. 8: 299-304. PMID 20066262 DOI: 10.1039/B913064K |
0.34 |
|
| 2010 |
Baker EL, Zaman MH. The biomechanical integrin. Journal of Biomechanics. 43: 38-44. PMID 19811786 DOI: 10.1016/J.Jbiomech.2009.09.007 |
0.37 |
|
| 2010 |
Yang T, Zaman MH. Estimation of cellular adhesion forces using mean field theory Cellular and Molecular Bioengineering. 3: 190-194. DOI: 10.1007/S12195-010-0115-1 |
0.315 |
|
| 2009 |
Baker EL, Bonnecaze RT, Zaman MH. Extracellular matrix stiffness and architecture govern intracellular rheology in cancer. Biophysical Journal. 97: 1013-21. PMID 19686648 DOI: 10.1016/J.Bpj.2009.05.054 |
0.35 |
|
| 2009 |
Yang T, Zaman MH. Equilibrium and non-equilibrium thermodynamic processes in cell-matrix interactions Journal of Non-Equilibrium Thermodynamics. 34: 195-217. DOI: 10.1515/Jnetdy.2009.011 |
0.31 |
|
| 2009 |
Yang T, Wang G, Zaman MH. Biophysics of Tumor Cell Adhesion: From single molecules to multi-cellular interactions Biophysical Journal. 96: 629a. DOI: 10.1016/J.Bpj.2008.12.3326 |
0.394 |
|
| 2009 |
Yang T, Zaman MH. Regulation of cell adhesion free energy by external sliding forces Experimental Mechanics. 49: 57-63. DOI: 10.1007/S11340-007-9104-2 |
0.33 |
|
| 2008 |
Zaman MH. Cell adhesion & migration. Cell Adhesion & Migration. 2: 53-4. PMID 19262104 DOI: 10.4161/Cam.2.2.6518 |
0.341 |
|
| 2008 |
Rangarajan R, Zaman MH. Modeling cell migration in 3D: Status and challenges. Cell Adhesion & Migration. 2: 106-9. PMID 19262098 DOI: 10.4161/Cam.2.2.6211 |
0.357 |
|
| 2008 |
Yang T, Zaman MH. Cell adhesion to nanoligands: effects of ligand size and concentration in solution. Langmuir : the Acs Journal of Surfaces and Colloids. 24: 11819-27. PMID 18816080 DOI: 10.1021/La801885C |
0.312 |
|
| 2008 |
Harley BA, Kim HD, Zaman MH, Yannas IV, Lauffenburger DA, Gibson LJ. Microarchitecture of three-dimensional scaffolds influences cell migration behavior via junction interactions. Biophysical Journal. 95: 4013-24. PMID 18621811 DOI: 10.1529/Biophysj.107.122598 |
0.385 |
|
| 2008 |
Enderling H, Alexander NR, Clark ES, Branch KM, Estrada L, Crooke C, Jourquin J, Lobdell N, Zaman MH, Guelcher SA, Anderson AR, Weaver AM. Dependence of invadopodia function on collagen fiber spacing and cross-linking: computational modeling and experimental evidence. Biophysical Journal. 95: 2203-18. PMID 18515372 DOI: 10.1529/Biophysj.108.133199 |
0.344 |
|
| 2008 |
Yang T, Zaman MH. Thermodynamics of clustered and unclustered receptor systems in cell adhesion Chemical Physics Letters. 454: 362-366. DOI: 10.1016/J.Cplett.2008.01.088 |
0.301 |
|
| 2007 |
Yang T, Zaman MH. Free energy landscape of receptor-mediated cell adhesion. The Journal of Chemical Physics. 126: 045103. PMID 17286513 DOI: 10.1063/1.2424985 |
0.366 |
|
| 2007 |
Zaman MH. Understanding the molecular basis for differential binding of integrins to collagen and gelatin. Biophysical Journal. 92: L17-9. PMID 17098789 DOI: 10.1529/Biophysj.106.097519 |
0.349 |
|
| 2007 |
Zaman MH, Matsudaira P, Lauffenburger DA. Understanding effects of matrix protease and matrix organization on directional persistence and translational speed in three-dimensional cell migration. Annals of Biomedical Engineering. 35: 91-100. PMID 17080315 DOI: 10.1007/S10439-006-9205-6 |
0.348 |
|
| 2006 |
Wolf-Yadlin A, Kumar N, Zhang Y, Hautaniemi S, Zaman M, Kim HD, Grantcharova V, Lauffenburger DA, White FM. Effects of HER2 overexpression on cell signaling networks governing proliferation and migration. Molecular Systems Biology. 2: 54. PMID 17016520 DOI: 10.1038/Msb4100094 |
0.331 |
|
| 2006 |
Zaman MH, Trapani LM, Sieminski AL, Siemeski A, Mackellar D, Gong H, Kamm RD, Wells A, Lauffenburger DA, Matsudaira P. Migration of tumor cells in 3D matrices is governed by matrix stiffness along with cell-matrix adhesion and proteolysis. Proceedings of the National Academy of Sciences of the United States of America. 103: 10889-94. PMID 16832052 DOI: 10.1073/Pnas.0604460103 |
0.391 |
|
| 2006 |
Kumar N, Zaman MH, Kim HD, Lauffenburger DA. A high-throughput migration assay reveals HER2-mediated cell migration arising from increased directional persistence. Biophysical Journal. 91: L32-4. PMID 16782798 DOI: 10.1529/Biophysj.106.088898 |
0.312 |
|
| 2006 |
Zaman MH. Multiscale modeling of tumor cell migration Aip Conference Proceedings. 851: 117-122. DOI: 10.1063/1.2345628 |
0.306 |
|
| 2005 |
Zaman MH, Kamm RD, Matsudaira P, Lauffenburger DA. Computational model for cell migration in three-dimensional matrices. Biophysical Journal. 89: 1389-97. PMID 15908579 DOI: 10.1529/Biophysj.105.060723 |
0.389 |
|
| 2003 |
Zaman MH, Shen MY, Berry RS, Freed KF, Sosnick TR. Investigations into sequence and conformational dependence of backbone entropy, inter-basin dynamics and the Flory isolated-pair hypothesis for peptides. Journal of Molecular Biology. 331: 693-711. PMID 12899838 DOI: 10.1016/S0022-2836(03)00765-4 |
0.437 |
|
| 2003 |
Zaman MH, Sosnick TR, Berry RS. Temperature dependence of reactions with multiple pathways Physical Chemistry Chemical Physics. 5: 2589-2594. DOI: 10.1039/B212671K |
0.41 |
|
| 2003 |
Zaman MH, Shen MY, Berry RS, Freed KF. Computer simulation of Met-enkephalin using explicit atom and united atom potentials: Similarities, differences, and suggestions for improvement Journal of Physical Chemistry B. 107: 1685-1691. DOI: 10.1021/Jp026994S |
0.426 |
|
| 2002 |
Zaman MH, Berry RS, Sosnick TR. Entropic benefit of a cross-link in protein association. Proteins. 48: 341-51. PMID 12112701 DOI: 10.1002/Prot.10165 |
0.421 |
|
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