Fred Cohen - Publications

Affiliations: 
Cellular and Molecular Pharmacology University of California, San Francisco, San Francisco, CA 
Area:
protein folding

115 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2010 Colby DW, Wain R, Baskakov IV, Legname G, Palmer CG, Nguyen HO, Lemus A, Cohen FE, DeArmond SJ, Prusiner SB. Protease-sensitive synthetic prions. Plos Pathogens. 6: e1000736. PMID 20107515 DOI: 10.1371/Journal.Ppat.1000736  0.451
2010 Wille H, Bian W, McDonald MD, Kendall AK, Colby D, Bloch L, Ollesch J, Borovinskiy AL, Cohen FE, Prusiner SB, Stubbs G. X-Ray Fiber Diffraction Reveals Major Structural Differences Between Brain-Derived Prions and Recombinant Prion Protein Amyloid Biophysical Journal. 98: 457a. DOI: 10.1016/J.BPJ.2009.12.2482  0.442
2009 Choi JH, May BC, Wille H, Cohen FE. Molecular modeling of the misfolded insulin subunit and amyloid fibril. Biophysical Journal. 97: 3187-95. PMID 20006956 DOI: 10.1016/J.Bpj.2009.09.042  0.483
2009 Wille H, Bian W, McDonald M, Kendall A, Colby DW, Bloch L, Ollesch J, Borovinskiy AL, Cohen FE, Prusiner SB, Stubbs G. Natural and synthetic prion structure from X-ray fiber diffraction. Proceedings of the National Academy of Sciences of the United States of America. 106: 16990-5. PMID 19805070 DOI: 10.1073/pnas.0909006106  0.479
2009 Choi JH, May BC, Govaerts C, Cohen FE. Site-directed mutagenesis demonstrates the plasticity of the beta helix: implications for the structure of the misfolded prion protein. Structure (London, England : 1993). 17: 1014-23. PMID 19604481 DOI: 10.1016/J.Str.2009.05.013  0.548
2008 Tamgüney G, Giles K, Glidden DV, Lessard P, Wille H, Tremblay P, Groth DF, Yehiely F, Korth C, Moore RC, Tatzelt J, Rubinstein E, Boucheix C, Yang X, Stanley P, ... ... Cohen FE, et al. Genes contributing to prion pathogenesis. The Journal of General Virology. 89: 1777-88. PMID 18559949 DOI: 10.1099/Vir.0.2008/001255-0  0.469
2008 Choi JH, Govaerts C, May BC, Cohen FE. Analysis of the sequence and structural features of the left-handed beta-helical fold. Proteins. 73: 150-60. PMID 18398908 DOI: 10.1002/Prot.22051  0.547
2007 Ghaemmaghami S, Phuan PW, Perkins B, Ullman J, May BC, Cohen FE, Prusiner SB. Cell division modulates prion accumulation in cultured cells. Proceedings of the National Academy of Sciences of the United States of America. 104: 17971-6. PMID 17989223 DOI: 10.1073/Pnas.0708372104  0.368
2007 Wille H, Govaerts C, Borovinskiy A, Latawiec D, Downing KH, Cohen FE, Prusiner SB. Electron crystallography of the scrapie prion protein complexed with heavy metals. Archives of Biochemistry and Biophysics. 467: 239-48. PMID 17935686 DOI: 10.1016/J.Abb.2007.08.010  0.481
2007 Phuan PW, Zorn JA, Safar J, Giles K, Prusiner SB, Cohen FE, May BC. Discriminating between cellular and misfolded prion protein by using affinity to 9-aminoacridine compounds. The Journal of General Virology. 88: 1392-401. PMID 17374787 DOI: 10.1099/Vir.0.82601-0  0.473
2007 Lee LC, Horn F, Cohen FE. Automatic extraction of protein point mutations using a graph bigram association. Plos Computational Biology. 3: e16. PMID 17274683 DOI: 10.1371/Journal.Pcbi.0030016  0.432
2007 May BC, Zorn JA, Witkop J, Sherrill J, Wallace AC, Legname G, Prusiner SB, Cohen FE. Structure-activity relationship study of prion inhibition by 2-aminopyridine-3,5-dicarbonitrile-based compounds: parallel synthesis, bioactivity, and in vitro pharmacokinetics. Journal of Medicinal Chemistry. 50: 65-73. PMID 17201410 DOI: 10.1021/Jm061045Z  0.439
2006 Legname G, Nguyen HO, Peretz D, Cohen FE, DeArmond SJ, Prusiner SB. Continuum of prion protein structures enciphers a multitude of prion isolate-specified phenotypes. Proceedings of the National Academy of Sciences of the United States of America. 103: 19105-10. PMID 17142317 DOI: 10.1073/pnas.0608970103  0.492
2006 Luginbühl B, Kanyo Z, Jones RM, Fletterick RJ, Prusiner SB, Cohen FE, Williamson RA, Burton DR, Plückthun A. Directed evolution of an anti-prion protein scFv fragment to an affinity of 1 pM and its structural interpretation. Journal of Molecular Biology. 363: 75-97. PMID 16962610 DOI: 10.1016/J.Jmb.2006.07.027  0.467
2006 May BC, Witkop J, Sherrill J, Anderson MO, Madrid PB, Zorn JA, Prusiner SB, Cohen FE, Guy RK. Structure-activity relationship study of 9-aminoacridine compounds in scrapie-infected neuroblastoma cells. Bioorganic & Medicinal Chemistry Letters. 16: 4913-6. PMID 16860557 DOI: 10.1016/J.Bmcl.2006.06.050  0.422
2005 Legname G, Nguyen HO, Baskakov IV, Cohen FE, Dearmond SJ, Prusiner SB. Strain-specified characteristics of mouse synthetic prions. Proceedings of the National Academy of Sciences of the United States of America. 102: 2168-73. PMID 15671162 DOI: 10.1073/Pnas.0409079102  0.396
2004 Legname G, Baskakov IV, Nguyen HO, Riesner D, Cohen FE, DeArmond SJ, Prusiner SB. Synthetic mammalian prions. Science (New York, N.Y.). 305: 673-6. PMID 15286374 DOI: 10.1126/Science.1100195  0.462
2004 Govaerts C, Wille H, Prusiner SB, Cohen FE. Evidence for assembly of prions with left-handed beta-helices into trimers. Proceedings of the National Academy of Sciences of the United States of America. 101: 8342-7. PMID 15155909 DOI: 10.1073/pnas.0402254101  0.478
2004 Schmitt-Ulms G, Hansen K, Liu J, Cowdrey C, Yang J, DeArmond SJ, Cohen FE, Prusiner SB, Baldwin MA. Time-controlled transcardiac perfusion cross-linking for the study of protein interactions in complex tissues. Nature Biotechnology. 22: 724-31. PMID 15146195 DOI: 10.1038/Nbt969  0.442
2004 May BC, Govaerts C, Prusiner SB, Cohen FE. Prions: so many fibers, so little infectivity. Trends in Biochemical Sciences. 29: 162-5. PMID 15124628 DOI: 10.1016/j.tibs.2004.02.008  0.46
2004 Tremblay P, Ball HL, Kaneko K, Groth D, Hegde RS, Cohen FE, DeArmond SJ, Prusiner SB, Safar JG. Mutant PrPSc conformers induced by a synthetic peptide and several prion strains. Journal of Virology. 78: 2088-99. PMID 14747574 DOI: 10.1128/Jvi.78.4.2088-2099.2004  0.461
2003 May BC, Fafarman AT, Hong SB, Rogers M, Deady LW, Prusiner SB, Cohen FE. Potent inhibition of scrapie prion replication in cultured cells by bis-acridines. Proceedings of the National Academy of Sciences of the United States of America. 100: 3416-21. PMID 12626750 DOI: 10.1073/pnas.2627988100  0.449
2003 Bozdech Z, Zhu J, Joachimiak MP, Cohen FE, Pulliam B, DeRisi JL. Expression profiling of the schizont and trophozoite stages of Plasmodium falciparum with a long-oligonucleotide microarray. Genome Biology. 4: R9. PMID 12620119 DOI: 10.1186/Gb-2003-4-2-R9  0.62
2003 Devoto A, Hartmann HA, Piffanelli P, Elliott C, Simmons C, Taramino G, Goh CS, Cohen FE, Emerson BC, Schulze-Lefert P, Panstruga R. Molecular phylogeny and evolution of the plant-specific seven-transmembrane MLO family. Journal of Molecular Evolution. 56: 77-88. PMID 12569425 DOI: 10.1007/S00239-002-2382-5  0.544
2002 Joachimiak MP, Cohen FE. JEvTrace: refinement and variations of the evolutionary trace in JAVA. Genome Biology. 3: RESEARCH0077. PMID 12537566 DOI: 10.1186/Gb-2002-3-12-Research0077  0.664
2002 Goh CS, Cohen FE. Co-evolutionary analysis reveals insights into protein-protein interactions. Journal of Molecular Biology. 324: 177-92. PMID 12421567 DOI: 10.1016/S0022-2836(02)01038-0  0.596
2002 Perrier V, Kaneko K, Safar J, Vergara J, Tremblay P, DeArmond SJ, Cohen FE, Prusiner SB, Wallace AC. Dominant-negative inhibition of prion replication in transgenic mice. Proceedings of the National Academy of Sciences of the United States of America. 99: 13079-84. PMID 12271119 DOI: 10.1073/pnas.182425299  0.428
2002 Beisser PS, Goh CS, Cohen FE, Michelson S. Viral chemokine receptors and chemokines in human cytomegalovirus trafficking and interaction with the immune system. CMV chemokine receptors. Current Topics in Microbiology and Immunology. 269: 203-34. PMID 12224510  0.542
2002 Baskakov IV, Legname G, Baldwin MA, Prusiner SB, Cohen FE. Pathway complexity of prion protein assembly into amyloid. The Journal of Biological Chemistry. 277: 21140-8. PMID 11912192 DOI: 10.1074/Jbc.M111402200  0.463
2002 Wille H, Michelitsch MD, Guenebaut V, Supattapone S, Serban A, Cohen FE, Agard DA, Prusiner SB. Structural studies of the scrapie prion protein by electron crystallography. Proceedings of the National Academy of Sciences of the United States of America. 99: 3563-8. PMID 11891310 DOI: 10.1073/Pnas.052703499  0.77
2002 Nicholson EM, Mo H, Prusiner SB, Cohen FE, Marqusee S. Differences between the prion protein and its homolog Doppel: a partially structured state with implications for scrapie formation. Journal of Molecular Biology. 316: 807-15. PMID 11866533 DOI: 10.1006/Jmbi.2001.5347  0.5
2001 Ball HL, King DS, Cohen FE, Prusiner SB, Baldwin MA. Engineering the prion protein using chemical synthesis. The Journal of Peptide Research : Official Journal of the American Peptide Society. 58: 357-74. PMID 11892845 DOI: 10.1034/j.1399-3011.2001.00943.x  0.517
2001 Schmitt-Ulms G, Legname G, Baldwin MA, Ball HL, Bradon N, Bosque PJ, Crossin KL, Edelman GM, DeArmond SJ, Cohen FE, Prusiner SB. Binding of neural cell adhesion molecules (N-CAMs) to the cellular prion protein. Journal of Molecular Biology. 314: 1209-25. PMID 11743735 DOI: 10.1006/jmbi.2000.5183  0.464
2001 Joachimiak MP, Chang C, Rosenthal PJ, Cohen FE. The impact of whole genome sequence data on drug discovery--a malaria case study. Molecular Medicine (Cambridge, Mass.). 7: 698-710. PMID 11713369 DOI: 10.1007/Bf03401960  0.641
2001 Laws DD, Bitter HM, Liu K, Ball HL, Kaneko K, Wille H, Cohen FE, Prusiner SB, Pines A, Wemmer DE. Solid-state NMR studies of the secondary structure of a mutant prion protein fragment of 55 residues that induces neurodegeneration. Proceedings of the National Academy of Sciences of the United States of America. 98: 11686-90. PMID 11562491 DOI: 10.1073/Pnas.201404298  0.496
2001 Korth C, May BC, Cohen FE, Prusiner SB. Acridine and phenothiazine derivatives as pharmacotherapeutics for prion disease. Proceedings of the National Academy of Sciences of the United States of America. 98: 9836-41. PMID 11504948 DOI: 10.1073/pnas.161274798  0.45
2001 Matsunaga Y, Peretz D, Williamson A, Burton D, Mehlhorn I, Groth D, Cohen FE, Prusiner SB, Baldwin MA. Cryptic epitopes in N-terminally truncated prion protein are exposed in the full-length molecule: dependence of conformation on pH. Proteins. 44: 110-8. PMID 11391773 DOI: 10.1002/Prot.1077  0.417
2001 Baskakov IV, Legname G, Prusiner SB, Cohen FE. Folding of prion protein to its native alpha-helical conformation is under kinetic control. The Journal of Biological Chemistry. 276: 19687-90. PMID 11306559 DOI: 10.1074/Jbc.C100180200  0.444
2001 Peretz D, Scott MR, Groth D, Williamson RA, Burton DR, Cohen FE, Prusiner SB. Strain-specified relative conformational stability of the scrapie prion protein. Protein Science : a Publication of the Protein Society. 10: 854-63. PMID 11274476 DOI: 10.1110/ps.39201  0.423
2001 Harrison PM, Chan HS, Prusiner SB, Cohen FE. Conformational propagation with prion-like characteristics in a simple model of protein folding. Protein Science : a Publication of the Protein Society. 10: 819-35. PMID 11274473 DOI: 10.1110/ps.38701  0.481
2001 Supattapone S, Bouzamondo E, Ball HL, Wille H, Nguyen HO, Cohen FE, DeArmond SJ, Prusiner SB, Scott M. A protease-resistant 61-residue prion peptide causes neurodegeneration in transgenic mice. Molecular and Cellular Biology. 21: 2608-16. PMID 11259607 DOI: 10.1128/MCB.21.7.2608-2616.2001  0.459
2001 Viles JH, Donne D, Kroon G, Prusiner SB, Cohen FE, Dyson HJ, Wright PE. Local structural plasticity of the prion protein. Analysis of NMR relaxation dynamics. Biochemistry. 40: 2743-53. PMID 11258885 DOI: 10.1021/Bi002898A  0.531
2001 Supattapone S, Wille H, Uyechi L, Safar J, Tremblay P, Szoka FC, Cohen FE, Prusiner SB, Scott MR. Branched polyamines cure prion-infected neuroblastoma cells. Journal of Virology. 75: 3453-61. PMID 11238871 DOI: 10.1128/Jvi.75.7.3453-3461.2001  0.44
2001 Mo H, Moore RC, Cohen FE, Westaway D, Prusiner SB, Wright PE, Dyson HJ. Two different neurodegenerative diseases caused by proteins with similar structures. Proceedings of the National Academy of Sciences of the United States of America. 98: 2352-7. PMID 11226243 DOI: 10.1073/Pnas.051627998  0.548
2001 Supattapone S, Muramoto T, Legname G, Mehlhorn I, Cohen FE, DeArmond SJ, Prusiner SB, Scott MR. Identification of two prion protein regions that modify scrapie incubation time. Journal of Virology. 75: 1408-13. PMID 11152514 DOI: 10.1128/JVI.75.3.1408-1413.2001  0.453
2000 Safar J, Cohen FE, Prusiner SB. Quantitative traits of prion strains are enciphered in the conformation of the prion protein. Archives of Virology. Supplementum. 227-35. PMID 11214926 DOI: 10.1007/978-3-7091-6308-5_22  0.429
2000 Supattapone S, Nguyen HO, Muramoto T, Cohen FE, DeArmond SJ, Prusiner SB, Scott M. Affinity-tagged miniprion derivatives spontaneously adopt protease-resistant conformations. Journal of Virology. 74: 11928-34. PMID 11090193 DOI: 10.1128/JVI.74.24.11928-11934.2000  0.491
2000 Aronoff-Spencer E, Burns CS, Avdievich NI, Gerfen GJ, Peisach J, Antholine WE, Ball HL, Cohen FE, Prusiner SB, Millhauser GL. Identification of the Cu2+ binding sites in the N-terminal domain of the prion protein by EPR and CD spectroscopy. Biochemistry. 39: 13760-71. PMID 11076515 DOI: 10.1021/Bi001472T  0.406
2000 Bogan AA, Dallas-Yang Q, Ruse MD, Maeda Y, Jiang G, Nepomuceno L, Scanlan TS, Cohen FE, Sladek FM. Analysis of protein dimerization and ligand binding of orphan receptor HNF4alpha. Journal of Molecular Biology. 302: 831-51. PMID 10993727 DOI: 10.1006/Jmbi.2000.4099  0.756
2000 Wille H, Prusiner SB, Cohen FE. Scrapie infectivity is independent of amyloid staining properties of the N-terminally truncated prion protein. Journal of Structural Biology. 130: 323-38. PMID 10940236 DOI: 10.1006/jsbi.2000.4242  0.475
2000 Goh CS, Bogan AA, Joachimiak M, Walther D, Cohen FE. Co-evolution of proteins with their interaction partners. Journal of Molecular Biology. 299: 283-93. PMID 10860738 DOI: 10.1006/Jmbi.2000.3732  0.744
2000 Silverman GL, Qin K, Moore RC, Yang Y, Mastrangelo P, Tremblay P, Prusiner SB, Cohen FE, Westaway D. Doppel is an N-glycosylated, glycosylphosphatidylinositol-anchored protein. Expression in testis and ectopic production in the brains of Prnp(0/0) mice predisposed to Purkinje cell loss. The Journal of Biological Chemistry. 275: 26834-41. PMID 10842180 DOI: 10.1074/jbc.M003888200  0.456
2000 Perrier V, Wallace AC, Kaneko K, Safar J, Prusiner SB, Cohen FE. Mimicking dominant negative inhibition of prion replication through structure-based drug design. Proceedings of the National Academy of Sciences of the United States of America. 97: 6073-8. PMID 10823951 DOI: 10.1073/pnas.97.11.6073  0.478
2000 Zulianello L, Kaneko K, Scott M, Erpel S, Han D, Cohen FE, Prusiner SB. Dominant-negative inhibition of prion formation diminished by deletion mutagenesis of the prion protein. Journal of Virology. 74: 4351-60. PMID 10756050 DOI: 10.1128/JVI.74.9.4351-4360.2000  0.465
2000 Whittal RM, Ball HL, Cohen FE, Burlingame AL, Prusiner SB, Baldwin MA. Copper binding to octarepeat peptides of the prion protein monitored by mass spectrometry. Protein Science : a Publication of the Protein Society. 9: 332-43. PMID 10716185 DOI: 10.1110/Ps.9.2.332  0.388
2000 Baskakov IV, Aagaard C, Mehlhorn I, Wille H, Groth D, Baldwin MA, Prusiner SB, Cohen FE. Self-assembly of recombinant prion protein of 106 residues. Biochemistry. 39: 2792-804. PMID 10704232 DOI: 10.1021/Bi9923353  0.506
2000 Kaneko K, Ball HL, Wille H, Zhang H, Groth D, Torchia M, Tremblay P, Safar J, Prusiner SB, DeArmond SJ, Baldwin MA, Cohen FE. A synthetic peptide initiates Gerstmann-Sträussler-Scheinker (GSS) disease in transgenic mice. Journal of Molecular Biology. 295: 997-1007. PMID 10656806 DOI: 10.1006/jmbi.1999.3386  0.449
1999 Supattapone S, Nguyen HO, Cohen FE, Prusiner SB, Scott MR. Elimination of prions by branched polyamines and implications for therapeutics. Proceedings of the National Academy of Sciences of the United States of America. 96: 14529-34. PMID 10588739 DOI: 10.1073/pnas.96.25.14529  0.436
1999 Kanyo ZF, Pan KM, Williamson RA, Burton DR, Prusiner SB, Fletterick RJ, Cohen FE. Antibody binding defines a structure for an epitope that participates in the PrPC-->PrPSc conformational change. Journal of Molecular Biology. 293: 855-63. PMID 10543972 DOI: 10.1006/Jmbi.1999.3193  0.46
1999 Moore RC, Lee IY, Silverman GL, Harrison PM, Strome R, Heinrich C, Karunaratne A, Pasternak SH, Chishti MA, Liang Y, Mastrangelo P, Wang K, Smit AF, Katamine S, Carlson GA, ... Cohen FE, et al. Ataxia in prion protein (PrP)-deficient mice is associated with upregulation of the novel PrP-like protein doppel. Journal of Molecular Biology. 292: 797-817. PMID 10525406 DOI: 10.1006/jmbi.1999.3108  0.493
1999 Liu H, Farr-Jones S, Ulyanov NB, Llinas M, Marqusee S, Groth D, Cohen FE, Prusiner SB, James TL. Solution structure of Syrian hamster prion protein rPrP(90-231). Biochemistry. 38: 5362-77. PMID 10220323 DOI: 10.1021/Bi982878X  0.508
1999 Supattapone S, Bosque P, Muramoto T, Wille H, Aagaard C, Peretz D, Nguyen HO, Heinrich C, Torchia M, Safar J, Cohen FE, DeArmond SJ, Prusiner SB, Scott M. Prion protein of 106 residues creates an artifical transmission barrier for prion replication in transgenic mice. Cell. 96: 869-78. PMID 10102274 DOI: 10.1016/S0092-8674(00)80596-6  0.471
1999 Viles JH, Cohen FE, Prusiner SB, Goodin DB, Wright PE, Dyson HJ. Copper binding to the prion protein: structural implications of four identical cooperative binding sites. Proceedings of the National Academy of Sciences of the United States of America. 96: 2042-7. PMID 10051591 DOI: 10.1073/Pnas.96.5.2042  0.423
1999 Harrison PM, Chan HS, Prusiner SB, Cohen FE. Thermodynamics of model prions and its implications for the problem of prion protein folding. Journal of Molecular Biology. 286: 593-606. PMID 9973573 DOI: 10.1006/jmbi.1998.2497  0.518
1999 Gerloff DL, Cannarozzi GM, Joachimiak M, Cohen FE, Schreiber D, Benner SA. Evolutionary, mechanistic, and predictive analyses of the hydroxymethyldihydropterin pyrophosphokinase family of proteins. Biochemical and Biophysical Research Communications. 254: 70-6. PMID 9920734 DOI: 10.1006/Bbrc.1998.9884  0.679
1998 Gerloff DL, Joachimiak M, Cohen FE, Cannarozzi GM, Chamberlin SG, Benner SA. Structure prediction in a post-genomic environment: a secondary and tertiary structural model for the initiation factor 5A family. Biochemical and Biophysical Research Communications. 251: 173-81. PMID 9790926 DOI: 10.1006/Bbrc.1998.9198  0.675
1998 Safar J, Wille H, Itri V, Groth D, Serban H, Torchia M, Cohen FE, Prusiner SB. Eight prion strains have PrP(Sc) molecules with different conformations. Nature Medicine. 4: 1157-65. PMID 9771749 DOI: 10.1038/2654  0.436
1998 Baldwin MA, James TL, Cohen FE, Prusiner SB. The three-dimensional structure of prion protein: implications for prion disease. Biochemical Society Transactions. 26: 481-6. PMID 9765900 DOI: 10.1042/Bst0260481  0.49
1998 Cohen FE, Prusiner SB. Pathologic conformations of prion proteins. Annual Review of Biochemistry. 67: 793-819. PMID 9759504 DOI: 10.1146/annurev.biochem.67.1.793  0.459
1998 Bogan AA, Cohen FE, Scanlan TS. Natural ligands of nuclear receptors have conserved volumes. Nature Structural Biology. 5: 679-81. PMID 9699629 DOI: 10.1038/1372  0.711
1998 Prusiner SB, Scott MR, DeArmond SJ, Cohen FE. Prion protein biology. Cell. 93: 337-48. PMID 9590169 DOI: 10.1016/S0092-8674(00)81163-0  0.344
1998 Stöckel J, Safar J, Wallace AC, Cohen FE, Prusiner SB. Prion protein selectively binds copper(II) ions. Biochemistry. 37: 7185-93. PMID 9585530 DOI: 10.1021/bi972827k  0.437
1997 DeArmond SJ, Sánchez H, Yehiely F, Qiu Y, Ninchak-Casey A, Daggett V, Camerino AP, Cayetano J, Rogers M, Groth D, Torchia M, Tremblay P, Scott MR, Cohen FE, Prusiner SB. Selective neuronal targeting in prion disease. Neuron. 19: 1337-48. PMID 9427256 DOI: 10.1016/S0896-6273(00)80424-9  0.451
1997 Armand P, Kirshenbaum K, Falicov A, Dunbrack RL, Dill KA, Zuckermann RN, Cohen FE. Chiral N-substituted glycines can form stable helical conformations. Folding & Design. 2: 369-75. PMID 9427011 DOI: 10.1016/S1359-0278(97)00051-5  0.538
1997 Scott MR, Safar J, Telling G, Nguyen O, Groth D, Torchia M, Koehler R, Tremblay P, Walther D, Cohen FE, DeArmond SJ, Prusiner SB. Identification of a prion protein epitope modulating transmission of bovine spongiform encephalopathy prions to transgenic mice. Proceedings of the National Academy of Sciences of the United States of America. 94: 14279-84. PMID 9405603 DOI: 10.1073/pnas.94.26.14279  0.432
1997 Donne DG, Viles JH, Groth D, Mehlhorn I, James TL, Cohen FE, Prusiner SB, Wright PE, Dyson HJ. Structure of the recombinant full-length hamster prion protein PrP(29-231): the N terminus is highly flexible. Proceedings of the National Academy of Sciences of the United States of America. 94: 13452-7. PMID 9391046 DOI: 10.1073/pnas.94.25.13452  0.543
1997 Byington CL, Dunbrack RL, Whitby FG, Cohen FE, Agabian N. Entamoeba histolytica: computer-assisted modeling of phosphofructokinase for the prediction of broad-spectrum antiparasitic agents. Experimental Parasitology. 87: 194-202. PMID 9371084 DOI: 10.1006/Expr.1997.4224  0.497
1997 Peretz D, Williamson RA, Matsunaga Y, Serban H, Pinilla C, Bastidas RB, Rozenshteyn R, James TL, Houghten RA, Cohen FE, Prusiner SB, Burton DR. A conformational transition at the N terminus of the prion protein features in formation of the scrapie isoform. Journal of Molecular Biology. 273: 614-22. PMID 9356250 DOI: 10.1006/jmbi.1997.1328  0.486
1997 James TL, Liu H, Ulyanov NB, Farr-Jones S, Zhang H, Donne DG, Kaneko K, Groth D, Mehlhorn I, Prusiner SB, Cohen FE. Solution structure of a 142-residue recombinant prion protein corresponding to the infectious fragment of the scrapie isoform. Proceedings of the National Academy of Sciences of the United States of America. 94: 10086-91. PMID 9294167 DOI: 10.1073/pnas.94.19.10086  0.555
1997 Kaneko K, Zulianello L, Scott M, Cooper CM, Wallace AC, James TL, Cohen FE, Prusiner SB. Evidence for protein X binding to a discontinuous epitope on the cellular prion protein during scrapie prion propagation. Proceedings of the National Academy of Sciences of the United States of America. 94: 10069-74. PMID 9294164 DOI: 10.1073/pnas.94.19.10069  0.516
1997 Dunbrack RL, Cohen FE. Bayesian statistical analysis of protein side-chain rotamer preferences. Protein Science : a Publication of the Protein Society. 6: 1661-81. PMID 9260279 DOI: 10.1002/pro.5560060807  0.522
1997 Kaneko K, Wille H, Mehlhorn I, Zhang H, Ball H, Cohen FE, Baldwin MA, Prusiner SB. Molecular properties of complexes formed between the prion protein and synthetic peptides. Journal of Molecular Biology. 270: 574-86. PMID 9245588 DOI: 10.1006/jmbi.1997.1135  0.459
1997 Muramoto T, DeArmond SJ, Scott M, Telling GC, Cohen FE, Prusiner SB. Heritable disorder resembling neuronal storage disease in mice expressing prion protein with deletion of an alpha-helix. Nature Medicine. 3: 750-5. PMID 9212101 DOI: 10.1038/nm0797-750  0.45
1997 Lundberg KM, Stenland CJ, Cohen FE, Prusiner SB, Millhauser GL. Kinetics and mechanism of amyloid formation by the prion protein H1 peptide as determined by time-dependent ESR. Chemistry & Biology. 4: 345-55. PMID 9195875 DOI: 10.1016/S1074-5521(97)90125-3  0.43
1997 Bower MJ, Cohen FE, Dunbrack RL. Prediction of protein side-chain rotamers from a backbone-dependent rotamer library: a new homology modeling tool. Journal of Molecular Biology. 267: 1268-82. PMID 9150411 DOI: 10.1006/jmbi.1997.0926  0.576
1997 Dunbrack RL, Gerloff DL, Bower M, Chen X, Lichtarge O, Cohen FE. Meeting review: the Second meeting on the Critical Assessment of Techniques for Protein Structure Prediction (CASP2), Asilomar, California, December 13-16, 1996. Folding & Design. 2: R27-42. PMID 9135979 DOI: 10.1016/S1359-0278(97)00011-4  0.558
1997 Zhang H, Stockel J, Mehlhorn I, Groth D, Baldwin MA, Prusiner SB, James TL, Cohen FE. Physical studies of conformational plasticity in a recombinant prion protein. Biochemistry. 36: 3543-53. PMID 9132005 DOI: 10.1021/bi961965r  0.48
1997 Kaneko K, Vey M, Scott M, Pilkuhn S, Cohen FE, Prusiner SB. COOH-terminal sequence of the cellular prion protein directs subcellular trafficking and controls conversion into the scrapie isoform. Proceedings of the National Academy of Sciences of the United States of America. 94: 2333-8. PMID 9122195 DOI: 10.1073/Pnas.94.6.2333  0.504
1997 Telling GC, Tremblay P, Torchia M, Dearmond SJ, Cohen FE, Prusiner SB. N-terminally tagged prion protein supports prion propagation in transgenic mice. Protein Science : a Publication of the Protein Society. 6: 825-33. PMID 9098892 DOI: 10.1002/pro.5560060409  0.494
1997 Byington CL, Dunbrack RL, Cohen FE, Agabian N. Molecular modeling of phosphofructokinase from Entamoeba histolytica for the prediction of new antiparasitic agents. Archives of Medical Research. 28: 86-8. PMID 9033023  0.47
1997 Harrison PM, Bamborough P, Daggett V, Prusiner SB, Cohen FE. The prion folding problem. Current Opinion in Structural Biology. 7: 53-9. PMID 9032055 DOI: 10.1016/S0959-440X(97)80007-3  0.492
1997 Schätzl HM, Da Costa M, Taylor L, Cohen FE, Prusiner SB. Prion protein gene variation among primates. Journal of Molecular Biology. 265: 257. PMID 9020986 DOI: 10.1006/jmbi.1996.0791  0.424
1996 Bamborough P, Wille H, Telling GC, Yehiely F, Prusiner SB, Cohen FE. Prion protein structure and scrapie replication: theoretical, spectroscopic, and genetic investigations. Cold Spring Harbor Symposia On Quantitative Biology. 61: 495-509. PMID 9246476 DOI: 10.1101/Sqb.1996.061.01.050  0.447
1996 Muramoto T, Scott M, Cohen FE, Prusiner SB. Recombinant scrapie-like prion protein of 106 amino acids is soluble. Proceedings of the National Academy of Sciences of the United States of America. 93: 15457-62. PMID 8986833 DOI: 10.1073/Pnas.93.26.15457  0.517
1996 Wille H, Baldwin MA, Cohen FE, DeArmond SJ, Prusiner SB. Prion protein amyloid: separation of scrapie infectivity from PrP polymers. Ciba Foundation Symposium. 199: 181-99; discussion 1. PMID 8915611  0.485
1996 Wille H, Zhang GF, Baldwin MA, Cohen FE, Prusiner SB. Separation of scrapie prion infectivity from PrP amyloid polymers. Journal of Molecular Biology. 259: 608-21. PMID 8683568 DOI: 10.1006/jmbi.1996.0343  0.48
1996 Mehlhorn I, Groth D, Stöckel J, Moffat B, Reilly D, Yansura D, Willett WS, Baldwin M, Fletterick R, Cohen FE, Vandlen R, Henner D, Prusiner SB. High-level expression and characterization of a purified 142-residue polypeptide of the prion protein. Biochemistry. 35: 5528-37. PMID 8611544 DOI: 10.1021/bi952965e  0.535
1996 Lichtarge O, Bourne HR, Cohen FE. An evolutionary trace method defines binding surfaces common to protein families. Journal of Molecular Biology. 257: 342-58. PMID 8609628 DOI: 10.1006/Jmbi.1996.0167  0.33
1996 Huang Z, Prusiner SB, Cohen FE. Structures of prion proteins and conformational models for prion diseases. Current Topics in Microbiology and Immunology. 207: 49-67. PMID 8575206 DOI: 10.1007/978-3-642-60983-1_5  0.393
1996 Prusiner SB, Telling G, Cohen FE, DeArmond SJ. Prion diseases of humans and animals Seminars in Virology. 7: 159-173. DOI: 10.1006/smvy.1996.0021  0.443
1995 Kazmirski SL, Alonso DO, Cohen FE, Prusiner SB, Daggett V. Theoretical studies of sequence effects on the conformational properties of a fragment of the prion protein: implications for scrapie formation. Chemistry & Biology. 2: 305-15. PMID 9383432 DOI: 10.1016/1074-5521(95)90049-7  0.48
1995 Schätzl HM, Da Costa M, Taylor L, Cohen FE, Prusiner SB. Prion protein gene variation among primates. Journal of Molecular Biology. 245: 362-74. PMID 7837269 DOI: 10.1006/JMBI.1994.0030  0.458
1995 Nguyen J, Baldwin MA, Cohen FE, Prusiner SB. Prion protein peptides induce alpha-helix to beta-sheet conformational transitions. Biochemistry. 34: 4186-92. PMID 7703230 DOI: 10.1021/Bi00013A006  0.437
1995 Baldwin MA, Cohen FE, Prusiner SB. Prion protein isoforms, a convergence of biological and structural investigations. The Journal of Biological Chemistry. 270: 19197-200. PMID 7642588 DOI: 10.1074/Jbc.270.33.19197  0.489
1995 Nguyen JT, Inouye H, Baldwin MA, Fletterick RJ, Cohen FE, Prusiner SB, Kirschner DA. X-ray diffraction of scrapie prion rods and PrP peptides. Journal of Molecular Biology. 252: 412-22. PMID 7563061 DOI: 10.1006/Jmbi.1995.0507  0.459
1995 Telling GC, Scott M, Mastrianni J, Gabizon R, Torchia M, Cohen FE, DeArmond SJ, Prusiner SB. Prion propagation in mice expressing human and chimeric PrP transgenes implicates the interaction of cellular PrP with another protein. Cell. 83: 79-90. PMID 7553876 DOI: 10.1016/0092-8674(95)90236-8  0.478
1995 Zhang H, Kaneko K, Nguyen JT, Livshits TL, Baldwin MA, Cohen FE, James TL, Prusiner SB. Conformational transitions in peptides containing two putative alpha-helices of the prion protein. Journal of Molecular Biology. 250: 514-26. PMID 7542350 DOI: 10.1006/jmbi.1995.0395  0.476
1995 Kaneko K, Peretz D, Pan KM, Blochberger TC, Wille H, Gabizon R, Griffith OH, Cohen FE, Baldwin MA, Prusiner SB. Prion protein (PrP) synthetic peptides induce cellular PrP to acquire properties of the scrapie isoform. Proceedings of the National Academy of Sciences of the United States of America. 92: 11160-4. PMID 7479957 DOI: 10.1073/pnas.92.24.11160  0.451
1994 Harris NL, Presnell SR, Cohen FE. Four helix bundle diversity in globular proteins. Journal of Molecular Biology. 236: 1356-68. PMID 8126725 DOI: 10.1016/0022-2836(94)90063-9  0.325
1994 Huang Z, Gabriel JM, Baldwin MA, Fletterick RJ, Prusiner SB, Cohen FE. Proposed three-dimensional structure for the cellular prion protein. Proceedings of the National Academy of Sciences of the United States of America. 91: 7139-43. PMID 7913747 DOI: 10.1073/Pnas.91.15.7139  0.5
1994 Cohen FE, Pan KM, Huang Z, Baldwin M, Fletterick RJ, Prusiner SB. Structural clues to prion replication. Science (New York, N.Y.). 264: 530-1. PMID 7909169 DOI: 10.1126/Science.7909169  0.435
1988 Ciardelli TL, Landgraf B, Gadski R, Strnad J, Cohen FE, Smith KA. A design approach to the structural analysis of interleukin-2. Journal of Molecular Recognition : Jmr. 1: 42-7. PMID 3273651 DOI: 10.1002/Jmr.300010108  0.307
1988 Bashford D, Cohen FE, Karplus M, Kuntz ID, Weaver DL. Diffusion-collision model for the folding kinetics of myoglobin. Proteins. 4: 211-27. PMID 3237719 DOI: 10.1002/Prot.340040308  0.398
1986 Cohen FE, Kosen PA, Kuntz ID, Epstein LB, Ciardelli TL, Smith KA. Structure-activity studies of interleukin-2 Science. 234: 349-352. PMID 3489989 DOI: 10.1126/Science.3489989  0.349
1983 Sternberg MJ, Cohen FE, Taylor WR. A combinational approach to the prediction of the tertiary fold of globular proteins. Biochemical Society Transactions. 10: 299-301. PMID 6183155 DOI: 10.1042/Bst0100299  0.308
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