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Christoph Borchers - Publications

Affiliations: 
Biochemistry and Biophysics University of North Carolina, Chapel Hill, Chapel Hill, NC 
Area:
Biochemistry
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52 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Makepeace KAT, Mohammed Y, Rudashevskaya EL, Petrotchenko EV, Vögtle FN, Meisinger C, Sickmann A, Borchers CH. Improving Identification of In-organello Protein-Protein Interactions Using an Affinity-enrichable, Isotopically Coded, and Mass Spectrometry-cleavable Chemical Crosslinker. Molecular & Cellular Proteomics : McP. 19: 624-639. PMID 33451698 DOI: 10.1074/mcp.RA119.001839  0.344
2020 Makepeace KAT, Mohammed Y, Rudashevskaya EL, Petrotchenko EV, Voegtle FN, Meisinger C, Sickmann A, Borchers CH. Improving identification of in-organello protein-protein interactions using an affinity-enrichable, isotopically-coded, and mass spectrometry-cleavable chemical crosslinker. Molecular & Cellular Proteomics : McP. PMID 32051233 DOI: 10.1074/mcp.RA119.001839  0.344
2019 Silva F, Guirgis A, von Aderkas P, Borchers CH, Thornburg R. LC-MS/MS based comparative proteomics of floral nectars reveal different mechanisms involved in floral defense of Nicotiana spp., Petunia hybrida and Datura stramonium. Journal of Proteomics. 103618. PMID 31846763 DOI: 10.1016/J.Jprot.2019.103618  0.305
2019 Masson GR, Burke JE, Ahn NG, Anand GS, Borchers C, Brier S, Bou-Assaf GM, Engen JR, Englander SW, Faber J, Garlish R, Griffin PR, Gross ML, Guttman M, Hamuro Y, et al. Recommendations for performing, interpreting and reporting hydrogen deuterium exchange mass spectrometry (HDX-MS) experiments. Nature Methods. 16: 595-602. PMID 31249422 DOI: 10.1038/S41592-019-0459-Y  0.34
2019 Iacobucci C, Piotrowski C, Aebersold R, Amaral BC, Andrews PC, Bernfur K, Borchers CH, Brodie NI, Bruce JE, Cao Y, Chaignepain S, Chavez JD, Claverol S, Cox J, Davis TN, et al. The First Community-Wide, Comparative Cross-linking Mass Spectrometry Study. Analytical Chemistry. PMID 31045356 DOI: 10.1021/Acs.Analchem.9B00658  0.396
2018 Popp R, Basik M, Spatz A, Batist G, Zahedi RP, Borchers CH. How iMALDI can improve clinical diagnostics. The Analyst. PMID 29713694 DOI: 10.1039/C8An00094H  0.316
2016 Percy AJ, Yang J, Chambers AG, Mohammed Y, Miliotis T, Borchers CH. Protocol for Standardizing High-to-Moderate Abundance Protein Biomarker Assessments Through an MRM-with-Standard-Peptides Quantitative Approach. Advances in Experimental Medicine and Biology. 919: 515-530. PMID 27975233 DOI: 10.1007/978-3-319-41448-5_24  0.3
2016 Percy AJ, Yang J, Chambers AG, Borchers CH. Increased Depth and Breadth of Plasma Protein Quantitation via Two-Dimensional Liquid Chromatography/Multiple Reaction Monitoring-Mass Spectrometry with Labeled Peptide Standards. Methods in Molecular Biology (Clifton, N.J.). 1410: 1-21. PMID 26867735 DOI: 10.1007/978-1-4939-3524-6_1  0.311
2015 von Aderkas P, Prior N, Gagnon S, Little S, Cross T, Hardie D, Borchers C, Thornburg R, Hou C, Lunny A. Degradome and Secretome of Pollination Drops of Ephedra Botanical Review. 81: 1-27. DOI: 10.1007/S12229-014-9147-X  0.371
2014 Percy AJ, Simon R, Chambers AG, Borchers CH. Enhanced sensitivity and multiplexing with 2D LC/MRM-MS and labeled standards for deeper and more comprehensive protein quantitation. Journal of Proteomics. 106: 113-24. PMID 24769237 DOI: 10.1016/j.jprot.2014.04.024  0.317
2014 Parker CE, Borchers CH. Mass spectrometry based biomarker discovery, verification, and validation--quality assurance and control of protein biomarker assays. Molecular Oncology. 8: 840-58. PMID 24713096 DOI: 10.1016/j.molonc.2014.03.006  0.333
2014 Carr SA, Abbatiello SE, Ackermann BL, Borchers C, Domon B, Deutsch EW, Grant RP, Hoofnagle AN, Hüttenhain R, Koomen JM, Liebler DC, Liu T, MacLean B, Mani DR, Mansfield E, et al. Targeted peptide measurements in biology and medicine: best practices for mass spectrometry-based assay development using a fit-for-purpose approach. Molecular & Cellular Proteomics : McP. 13: 907-17. PMID 24443746 DOI: 10.1074/Mcp.M113.036095  0.362
2013 Prior N, Little SA, Pirone C, Gill JE, Smith D, Han J, Hardie D, O'Leary SJ, Wagner RE, Cross T, Coulter A, Borchers C, Olafson RW, von Aderkas P. Application of proteomics to the study of pollination drops. Applications in Plant Sciences. 1. PMID 25202539 DOI: 10.3732/Apps.1300008  0.386
2013 Eisen D, Planatscher H, Hardie DB, Kraushaar U, Pynn CJ, Stoll D, Borchers C, Joos TO, Poetz O. G protein-coupled receptor quantification using peptide group-specific enrichment combined with internal peptide standard reporter calibration. Journal of Proteomics. 90: 85-95. PMID 23500134 DOI: 10.1016/J.Jprot.2013.02.017  0.313
2012 Orchard S, Binz PA, Borchers C, Gilson MK, Jones AR, Nicola G, Vizcaino JA, Deutsch EW, Hermjakob H. Ten years of standardizing proteomic data: a report on the HUPO-PSI Spring Workshop: April 12-14th, 2012, San Diego, USA. Proteomics. 12: 2767-72. PMID 22969026 DOI: 10.1002/Pmic.201270126  0.307
2011 Shah B, Kozlowski RL, Han J, Borchers CH. Emerging mass spectrometry-based technologies for analyses of Chromatin changes: Analysis of histones and histone modifications Methods in Molecular Biology. 773: 259-303. PMID 21898261 DOI: 10.1007/978-1-61779-231-1_16  0.327
2010 Hem S, Gherardini PF, Osorio y Fortéa J, Hourdel V, Morales MA, Watanabe R, Pescher P, Kuzyk MA, Smith D, Borchers CH, Zilberstein D, Helmer-Citterich M, Namane A, Späth GF. Identification of Leishmania-specific protein phosphorylation sites by LC-ESI-MS/MS and comparative genomics analyses. Proteomics. 10: 3868-83. PMID 20960452 DOI: 10.1002/Pmic.201000305  0.322
2010 Han J, Borchers CH. Top-down analysis of recombinant histone H3 and its methylated analogs by ESI/FT-ICR mass spectrometry Proteomics. 10: 3621-3630. PMID 20486121 DOI: 10.1002/pmic.201000157  0.309
2010 Helbing CC, Maher SK, Han J, Gunderson MP, Borchers C. Peering into molecular mechanisms of action with frogSCOPE General and Comparative Endocrinology. 168: 190-198. PMID 20074577 DOI: 10.1016/J.Ygcen.2010.01.012  0.3
2009 Elliott MH, Smith DS, Parker CE, Borchers C. Current trends in quantitative proteomics. Journal of Mass Spectrometry : Jms. 44: 1637-60. PMID 19957301 DOI: 10.1002/Jms.1692  0.343
2009 Pan J, Han J, Borchers CH, Konermann L. Hydrogen/deuterium exchange mass spectrometry with top-down electron capture dissociation for characterizing structural transitions of a 17 kDa protein Journal of the American Chemical Society. 131: 12801-12808. PMID 19670873 DOI: 10.1021/Ja904379W  0.323
2009 Sneekes EJ, Han J, Elliot M, Ausio J, Swart R, Heck AJ, Borchers C. Accurate molecular weight analysis of histones using FFE and RP-HPLC on monolithic capillary columns. Journal of Separation Science. 32: 2691-8. PMID 19569095 DOI: 10.1002/Jssc.200800627  0.328
2009 Ouvry-Patat SA, Torres MP, Gelfand CA, Quek HH, Easterling M, Speir JP, Borchers CH. Top-down proteomics on a high-field Fourier transform ion cyclotron resonance mass spectrometer. Methods in Molecular Biology (Clifton, N.J.). 492: 215-31. PMID 19241035 DOI: 10.1007/978-1-59745-493-3_12  0.637
2009 Anderson NL, Jackson A, Smith D, Hardie D, Borchers C, Pearson TW. SISCAPA peptide enrichment on magnetic beads using an in-line bead trap device. Molecular & Cellular Proteomics : McP. 8: 995-1005. PMID 19196707 DOI: 10.1074/Mcp.M800446-Mcp200  0.312
2008 Danell RM, Ouvry-Patat SA, Scarlett CO, Speir JP, Borchers CH. Data Self-Recalibration and Mixture Mass Fingerprint Searching (DASER-MMF) to enhance protein identification within complex mixtures. Journal of the American Society For Mass Spectrometry. 19: 1914-25. PMID 18708289 DOI: 10.1016/J.Jasms.2008.07.017  0.326
2008 Ouvry-Patat SA, Torres MP, Quek HH, Gelfand CA, O'Mullan P, Nissum M, Schroeder GK, Han J, Elliott M, Dryhurst D, Ausio J, Wolfenden R, Borchers CH. Free-flow electrophoresis for top-down proteomics by Fourier transform ion cyclotron resonance mass spectrometry. Proteomics. 8: 2798-808. PMID 18655049 DOI: 10.1002/Pmic.200800079  0.642
2007 Jiang J, Parker CE, Hoadley KA, Perou CM, Boysen G, Borchers CH. Development of an immuno tandem mass spectrometry (iMALDI) assay for EGFR diagnosis. Proteomics. Clinical Applications. 1: 1651-9. PMID 21136662 DOI: 10.1002/Prca.200700009  0.422
2007 Jiang J, Parker CE, Fuller JR, Kawula TH, Borchers CH. An immunoaffinity tandem mass spectrometry (iMALDI) assay for detection of Francisella tularensis. Analytica Chimica Acta. 605: 70-9. PMID 18022413 DOI: 10.1016/J.Aca.2007.10.025  0.39
2007 Torres MP, Borchers CH. Mitotic phosphorylation of the anaphase-promoting complex inhibitory subunit Mnd2 is necessary for efficient progression through meiosis i. The Journal of Biological Chemistry. 282: 17351-62. PMID 17459880 DOI: 10.1074/Jbc.M610841200  0.595
2007 Hao N, Behar M, Parnell SC, Torres MP, Borchers CH, Elston TC, Dohlman HG. A systems-biology analysis of feedback inhibition in the Sho1 osmotic-stress-response pathway. Current Biology : Cb. 17: 659-67. PMID 17363249 DOI: 10.1016/J.Cub.2007.02.044  0.686
2007 Dial JM, Petrotchenko EV, Borchers CH. Inhibition of APCCdh1 activity by Cdh1/Acm1/Bmh1 ternary complex formation. The Journal of Biological Chemistry. 282: 5237-48. PMID 17178718 DOI: 10.1074/jbc.M606589200  0.735
2006 Borchers CH, Thapar R, Petrotchenko EV, Torres MP, Speir JP, Easterling M, Dominski Z, Marzluff WF. Combined top-down and bottom-up proteomics identifies a phosphorylation site in stem-loop-binding proteins that contributes to high-affinity RNA binding. Proceedings of the National Academy of Sciences of the United States of America. 103: 3094-9. PMID 16492733 DOI: 10.1073/Pnas.0511289103  0.642
2005 Warren EN, Jiang J, Parker CE, Borchers CH. Absolute quantitation of cancer-related proteins using an MS-based peptide chip. Biotechniques. 7-11. PMID 16528910 DOI: 10.2144/05386Su01  0.44
2005 Torres MP, Thapar R, Marzluff WF, Borchers CH. Phosphatase-directed phosphorylation-site determination: a synthesis of methods for the detection and identification of phosphopeptides. Journal of Proteome Research. 4: 1628-35. PMID 16212415 DOI: 10.1021/Pr050129D  0.626
2005 Dai Q, Qian SB, Li HH, McDonough H, Borchers C, Huang D, Takayama S, Younger JM, Ren HY, Cyr DM, Patterson C. Regulation of the cytoplasmic quality control protein degradation pathway by BAG2. The Journal of Biological Chemistry. 280: 38673-81. PMID 16169850 DOI: 10.1074/Jbc.M507986200  0.385
2005 Parnell SC, Marotti LA, Kiang L, Torres MP, Borchers CH, Dohlman HG. Phosphorylation of the RGS protein Sst2 by the MAP kinase Fus3 and use of Sst2 as a model to analyze determinants of substrate sequence specificity. Biochemistry. 44: 8159-66. PMID 15924435 DOI: 10.1021/Bi0503091  0.703
2005 Parker CE, Warren MR, Loiselle DR, Dicheva NN, Scarlett CO, Borchers CH. Identification of components of protein complexes Methods in Molecular Biology (Clifton, N.J.). 301: 117-151. PMID 15917630 DOI: 10.1385/1-59259-895-1:117  0.303
2004 Howell M, Borchers C, Milgram SL. Heterogeneous nuclear ribonuclear protein U associates with YAP and regulates its co-activation of Bax transcription. The Journal of Biological Chemistry. 279: 26300-6. PMID 15096513 DOI: 10.1074/Jbc.M401070200  0.372
2003 Furukawa M, He YJ, Borchers C, Xiong Y. Targeting of protein ubiquitination by BTB-Cullin 3-Roc1 ubiquitin ligases. Nature Cell Biology. 5: 1001-7. PMID 14528312 DOI: 10.1038/Ncb1056  0.372
2003 Kast J, Parker CE, van der Drift K, Dial JM, Milgram SL, Wilm M, Howell M, Borchers CH. Matrix-assisted laser desorption/ionization directed nano-electrospray ionization tandem mass spectrometric analysis for protein identification. Rapid Communications in Mass Spectrometry : Rcm. 17: 1825-34. PMID 12876682 DOI: 10.1002/Rcm.1114  0.728
2003 Huang C, Rajfur Z, Borchers C, Schaller MD, Jacobson K. JNK phosphorylates paxillin and regulates cell migration. Nature. 424: 219-23. PMID 12853963 DOI: 10.1038/Nature01745  0.319
2003 Hall MC, Shcherbakova PV, Fortune JM, Borchers CH, Dial JM, Tomer KB, Kunkel TA. DNA binding by yeast Mlh1 and Pms1: implications for DNA mismatch repair. Nucleic Acids Research. 31: 2025-34. PMID 12682353 DOI: 10.1093/Nar/Gkg324  0.699
2003 Hall MC, Torres MP, Schroeder GK, Borchers CH. Mnd2 and Swm1 are core subunits of the Saccharomyces cerevisiae anaphase-promoting complex. The Journal of Biological Chemistry. 278: 16698-705. PMID 12609981 DOI: 10.1074/Jbc.M213109200  0.585
2002 Han J, Pope M, Borchers C, M Graves L. Mapping of protein phosphorylation by dual enzyme digestion and matrix-assisted laser desorption ionization-quadrupole orthogonal time-of-flight mass spectrometry. Analytical Biochemistry. 310: 215-8. PMID 12423641 DOI: 10.1016/S0003-2697(02)00376-7  0.464
2002 Bruno ME, Borchers CH, Dial JM, Walker NJ, Hartis JE, Wetmore BA, Carl Barrett JC, Tomer KB, Merrick BA. Effects of TCDD upon IkappaB and IKK subunits localized in microsomes by proteomics. Archives of Biochemistry and Biophysics. 406: 153-64. PMID 12361703 DOI: 10.1016/S0003-9861(02)00452-6  0.742
2002 Raska CS, Parker CE, Dominski Z, Marzluff WF, Glish GL, Pope RM, Borchers CH. Direct MALDI-MS/MS of phosphopeptides affinity-bound to immobilized metal ion affinity chromatography beads. Analytical Chemistry. 74: 3429-33. PMID 12139050 DOI: 10.1021/Ac0111199  0.312
2002 Wine RN, Dial JM, Tomer KB, Borchers CH. Identification of components of protein complexes using a fluorescent photo-cross-linker and mass spectrometry. Analytical Chemistry. 74: 1939-45. PMID 12033289 DOI: 10.1021/Ac011041W  0.736
2002 Han J, Pope M, Borchers C, Graves LM. Mapping of protein phosphorylation by dual enzyme digestion and MALDI/quadrupole orthogonal TOF mass spectrometry Proceedings 50th Asms Conference On Mass Spectrometry and Allied Topics. 559-560.  0.34
2000 Zhu X, Borchers C, Bienstock RJ, Tomer KB. Mass spectrometric characterization of the glycosylation pattern of HIV-gp120 expressed in CHO cells Biochemistry. 39: 11194-11204. PMID 10985765 DOI: 10.1021/Bi000432M  0.354
2000 Borchers C, Peter JF, Hall MC, Kunkel TA, Tomer KB. Identification of in-gel digested proteins by complementary peptide mass fingerprinting and tandem mass spectrometry data obtained on an electrospray ionization quadrupole time-of-flight mass spectrometer Analytical Chemistry. 72: 1163-1168. PMID 10740854 DOI: 10.1021/ac990937m  0.321
1998 Fiedler W, Borchers C, Macht M, Deininger SO, Przybylski M. Molecular characterization of a conformational epitope of hen egg white lysozyme by differential chemical modification of immune complexes and mass spectrometric peptide mapping Bioconjugate Chemistry. 9: 236-241. PMID 9548539 DOI: 10.1021/Bc970148G  0.336
1994 Glocker MO, Borchers C, Fiedler W, Suckau D, Przybylski M. Molecular characterization of surface topology in protein tertiary structures by amino-acylation and mass spectrometric peptide mapping Bioconjugate Chemistry. 5: 583-590. PMID 7873661 DOI: 10.1021/Bc00030A014  0.385
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