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Daniel M. Tartakovsky - Publications

Affiliations: 
Engineering Sciences w/ Spec in Computational Science University of California, San Diego, La Jolla, CA 
Area:
Mechanical Engineering, Environmental Engineering
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36 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Davies N, Field D, Gavaghan D, Holbrook SJ, Planes S, Troyer M, Bonsall M, Claudet J, Roderick G, Schmitt RJ, Zettler LA, Berteaux V, Bossin HC, Cabasse C, Collin A, ... ... Tartakovsky DM, et al. Simulating social-ecological systems: the Island Digital Ecosystem Avatars (IDEA) consortium. Gigascience. 5: 14. PMID 26998258 DOI: 10.1186/s13742-016-0118-5  1
2015 Park SW, Intaglietta M, Tartakovsky DM. Impact of stochastic fluctuations in the cell free layer on nitric oxide bioavailability. Frontiers in Computational Neuroscience. 9: 131. PMID 26578944 DOI: 10.3389/fncom.2015.00131  1
2015 Thanh T, Yu Y, Ho T, Tien MV, Phan T, Tartakovsky D, Yu S. Critical behavior in double-exchange ferromagnets of Pr0.6Sr0.4MnO3 nanoparticles 2015 Ieee International Magnetics Conference, Intermag 2015. DOI: 10.1109/INTMAG.2015.7157525  1
2014 Regner BM, Tartakovsky DM, Sejnowski TJ. Identifying transport behavior of single-molecule trajectories. Biophysical Journal. 107: 2345-51. PMID 25418303 DOI: 10.1016/j.bpj.2014.10.005  1
2014 Tsai AG, Salazar Vázquez BY, Cabrales P, Kistler EB, Tartakovsky DM, Subramaniam S, Acharya SA, Intaglietta M. Replacing the Transfusion of 1-2 Units of Blood with Plasma Expanders that Increase Oxygen Delivery Capacity: Evidence from Experimental Studies. Journal of Functional Biomaterials. 5: 232-45. PMID 25350267 DOI: 10.3390/jfb5040232  0.32
2014 Sriram K, Intaglietta M, Tartakovsky DM. Hematocrit dispersion in asymmetrically bifurcating vascular networks. American Journal of Physiology. Heart and Circulatory Physiology. 307: H1576-86. PMID 25217657 DOI: 10.1152/ajpheart.00283.2014  1
2014 Farhangmehr F, Maurya MR, Tartakovsky DM, Subramaniam S. Information theoretic approach to complex biological network reconstruction: application to cytokine release in RAW 264.7 macrophages. Bmc Systems Biology. 8: 77. PMID 24964861 DOI: 10.1186/1752-0509-8-77  1
2014 Sriram K, Intaglietta M, Tartakovsky DM. Non-Newtonian flow of blood in arterioles: consequences for wall shear stress measurements. Microcirculation (New York, N.Y. : 1994). 21: 628-39. PMID 24703006 DOI: 10.1111/micc.12141  1
2014 Taverniers S, Alexander FJ, Tartakovsky DM. Noise propagation in hybrid models of nonlinear systems: The Ginzburg-Landau equation Journal of Computational Physics. 262: 313-324. DOI: 10.1016/j.jcp.2014.01.015  1
2013 Wang P, Tartakovsky AM, Tartakovsky DM. Probability density function method for Langevin equations with colored noise. Physical Review Letters. 110: 140602. PMID 25166972 DOI: 10.1103/PhysRevLett.110.140602  0.56
2013 Regner BM, Vu?ini? D, Domnisoru C, Bartol TM, Hetzer MW, Tartakovsky DM, Sejnowski TJ. Anomalous diffusion of single particles in cytoplasm. Biophysical Journal. 104: 1652-60. PMID 23601312 DOI: 10.1016/j.bpj.2013.01.049  1
2013 Wang P, Tartakovsky DM, Jarman KD, Tartakovsky AM. CDF solutions of buckley-leverett equation with uncertain parameters Multiscale Modeling and Simulation. 11: 118-133. DOI: 10.1137/120865574  1
2013 Farhangmehr F, Tartakovsky DM, Sadatmousavi P, Maurya MR, Subramaniam S. An information-theoretic algorithm to data-driven genetic pathway interaction network reconstruction of dynamic systems Proceedings - 2013 Ieee International Conference On Bioinformatics and Biomedicine, Ieee Bibm 2013. 214-217. DOI: 10.1109/BIBM.2013.6732492  1
2012 Choi T, Maurya MR, Tartakovsky DM, Subramaniam S. Stochastic operator-splitting method for reaction-diffusion systems. The Journal of Chemical Physics. 137: 184102. PMID 23163359 DOI: 10.1063/1.4764108  0.32
2012 Asadi B, Maurya MR, Tartakovsky DM, Subramaniam S. Comparison of statistical and optimisation-based methods for data-driven network reconstruction of biochemical systems. Iet Systems Biology. 6: 155-63. PMID 23101870 DOI: 10.1049/iet-syb.2011.0052  1
2012 Sriram K, Salazar Vázquez BY, Tsai AG, Cabrales P, Intaglietta M, Tartakovsky DM. Autoregulation and mechanotransduction control the arteriolar response to small changes in hematocrit. American Journal of Physiology. Heart and Circulatory Physiology. 303: H1096-106. PMID 22923620 DOI: 10.1152/ajpheart.00438.2012  1
2012 Sriram K, Tsai AG, Cabrales P, Meng F, Acharya SA, Tartakovsky DM, Intaglietta M. PEG-albumin supraplasma expansion is due to increased vessel wall shear stress induced by blood viscosity shear thinning. American Journal of Physiology. Heart and Circulatory Physiology. 302: H2489-97. PMID 22505638 DOI: 10.1152/ajpheart.01090.2011  1
2012 Park SW, Intaglietta M, Tartakovsky DM. Impact of endothelium roughness on blood flow. Journal of Theoretical Biology. 300: 152-60. PMID 22300799 DOI: 10.1016/j.jtbi.2012.01.017  1
2012 Asadi B, Tartakovsky DM, Maurya MR, Subramaniam S. Doubly penalized LASSO for reconstruction of biological networks Proceedings - 2012 Ieee 2nd Conference On Healthcare Informatics, Imaging and Systems Biology, Hisb 2012. 129. DOI: 10.1109/HISB.2012.54  1
2011 Hightower CM, Salazar Vázquez BY, Woo Park S, Sriram K, Martini J, Yalcin O, Tsai AG, Cabrales P, Tartakovsky DM, Johnson PC, Intaglietta M. Integration of cardiovascular regulation by the blood/endothelium cell-free layer. Wiley Interdisciplinary Reviews. Systems Biology and Medicine. 3: 458-70. PMID 21523919 DOI: 10.1002/wsbm.150  1
2011 Battiato I, Tartakovsky DM. Applicability regimes for macroscopic models of reactive transport in porous media. Journal of Contaminant Hydrology. 120: 18-26. PMID 20598771 DOI: 10.1016/j.jconhyd.2010.05.005  1
2011 Battiato I, Tartakovsky DM, Tartakovsky AM, Scheibe TD. Hybrid models of reactive transport in porous and fractured media Advances in Water Resources. 34: 1140-1150. DOI: 10.1016/j.advwatres.2011.01.012  1
2010 Battiato I, Bandaru PR, Tartakovsky DM. Elastic response of carbon nanotube forests to aerodynamic stresses. Physical Review Letters. 105: 144504. PMID 21230836 DOI: 10.1103/PhysRevLett.105.144504  1
2010 Choi T, Maurya MR, Tartakovsky DM, Subramaniam S. Stochastic hybrid modeling of intracellular calcium dynamics. The Journal of Chemical Physics. 133: 165101. PMID 21033822 DOI: 10.1063/1.3496996  0.32
2010 Vázquez BY, Hightower CM, Sapuppo F, Tartakovsky DM, Intaglietta M. Functional optical imaging at the microscopic level. Journal of Biomedical Optics. 15: 011102. PMID 20210428 DOI: 10.1117/1.3280270  1
2010 Asadi B, Tartakovsky DM, Maurya MR, Subramaniam S. Comparison of statistical and optimization-based methods for data-driven network reconstruction of biochemical systems Proceedings of the Iasted International Conference On Computational Bioscience, Compbio 2010. 587-592. DOI: 10.2316/P.2010.728-025  1
2010 Srinivasan G, Tartakovsky DM, Dentz M, Viswanathan H, Berkowitz B, Robinson BA. Random walk particle tracking simulations of non-Fickian transport in heterogeneous media Journal of Computational Physics. 229: 4304-4314. DOI: 10.1016/j.jcp.2010.02.014  1
2008 Tartakovsky AM, Tartakovsky DM, Meakin P. Stochastic langevin model for flow and transport in porous media. Physical Review Letters. 101: 044502. PMID 18764333 DOI: 10.1103/PhysRevLett.101.044502  0.56
2007 Tartakovsky DM, Xiu D. Stochastic modeling of complex systems Computing in Science and Engineering. 9: 8-9. DOI: 10.1109/MCSE.2007.32  1
2007 Srinivasan G, Tartakovsky DM, Robinson BA, Aceves AB. Quantification of uncertainty in geochemical reactions Water Resources Research. 43. DOI: 10.1029/2007WR006003  1
2006 Xiu D, Tartakovsky DM. Numerical methods for differential equations in random domains Siam Journal On Scientific Computing. 28: 1167-1185. DOI: 10.1137/040613160  1
2006 Tartakovsky DM, Xiu D. Stochastic analysis of transport in tubes with rough walls Journal of Computational Physics. 217: 248-259. DOI: 10.1016/j.jcp.2006.02.029  1
2006 Winter CL, Guadagnini A, Nychka D, Tartakovsky DM. Multivariate sensitivity analysis of saturated flow through simulated highly heterogeneous groundwater aquifers Journal of Computational Physics. 217: 166-175. DOI: 10.1016/j.jcp.2006.01.047  1
2005 Alexander FJ, Tartakovsky DM, Garcia AL. Noise in algorithm refinement methods Computing in Science and Engineering. 7: 32-38. DOI: 10.1109/MCSE.2005.56  1
2005 Tartakovsky DM, Alexander FJ. Multiphysics modeling Computing in Science and Engineering. 7: 14-15. DOI: 10.1109/MCSE.2005.51  1
2004 Xiu D, Tartakovsky DM. Uncertainty quantification for flow in highly heterogeneous porous media Developments in Water Science. 55: 695-703. DOI: 10.1016/S0167-5648(04)80092-3  1
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