Diego Lirman - Publications

Affiliations: 
Marine Biology and Fisheries (Marine) University of Miami, Coral Gables, FL 
Area:
Ecology Biology

66 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Harrell C, Lirman D. defense: Developing effective chemical protection against intense fish predation for outplanted massive corals. Peerj. 11: e14995. PMID 36915655 DOI: 10.7717/peerj.14995  0.327
2020 Koval G, Rivas N, D'Alessandro M, Hesley D, Santos R, Lirman D. Fish predation hinders the success of coral restoration efforts using fragmented massive corals. Peerj. 8: e9978. PMID 33062430 DOI: 10.7717/peerj.9978  0.379
2020 Stipek C, Santos R, Babcock E, Lirman D. Modelling the resilience of seagrass communities exposed to pulsed freshwater discharges: A seascape approach. Plos One. 15: e0229147. PMID 32084176 DOI: 10.1371/Journal.Pone.0229147  0.44
2019 Santos RO, Varona G, Avila CL, Lirman D, Collado-Vides L. Implications of macroalgae blooms to the spatial structure of seagrass seascapes: The case of the Anadyomene spp. (Chlorophyta) bloom in Biscayne Bay, Florida. Marine Pollution Bulletin. 110742. PMID 31787339 DOI: 10.1016/J.Marpolbul.2019.110742  0.399
2019 Drury C, Greer JB, Baums I, Gintert B, Lirman D. Clonal diversity impacts coral cover in thickets: Potential relationships between density, growth, and polymorphisms. Ecology and Evolution. 9: 4518-4531. PMID 31031924 DOI: 10.1002/Ece3.5035  0.743
2018 Zink IC, Browder JA, Lirman D, Serafy JE. Pink shrimp Farfantepenaeus duorarum spatiotemporal abundance trends along an urban, subtropical shoreline slated for restoration. Plos One. 13: e0198539. PMID 30403667 DOI: 10.1371/Journal.Pone.0198539  0.375
2018 Merselis DG, Lirman D, Rodriguez-Lanetty M. Symbiotic immuno-suppression: is disease susceptibility the price of bleaching resistance? Peerj. 6: e4494. PMID 29682405 DOI: 10.7717/Peerj.4494  0.315
2018 Parkinson JE, Bartels E, Devlin-Durante MK, Lustic C, Nedimyer K, Schopmeyer S, Lirman D, LaJeunesse TC, Baums IB. Extensive transcriptional variation poses a challenge to thermal stress biomarker development for endangered corals. Molecular Ecology. PMID 29412490 DOI: 10.1111/Mec.14517  0.355
2018 Santos R, Lirman D, Pittman S, Serafy J. Spatial patterns of seagrasses and salinity regimes interact to structure marine faunal assemblages in a subtropical bay Marine Ecology Progress Series. 594: 21-38. DOI: 10.3354/Meps12499  0.326
2018 Drury C, Paris CB, Kourafalou VH, Lirman D. Dispersal capacity and genetic relatedness in Acropora cervicornis on the Florida Reef Tract Coral Reefs. 37: 585-596. DOI: 10.1007/S00338-018-1683-0  0.365
2017 Drury C, Schopmeyer S, Goergen E, Bartels E, Nedimyer K, Johnson M, Maxwell K, Galvan V, Manfrino C, Lirman D. Genomic patterns in Acropora cervicornis show extensive population structure and variable genetic diversity. Ecology and Evolution. 7: 6188-6200. PMID 28861224 DOI: 10.1002/Ece3.3184  0.399
2017 Drury C, Manzello D, Lirman D. Genotype and local environment dynamically influence growth, disturbance response and survivorship in the threatened coral, Acropora cervicornis. Plos One. 12: e0174000. PMID 28319134 DOI: 10.1371/Journal.Pone.0174000  0.383
2017 Hesley D, Burdeno D, Drury C, Schopmeyer S, Lirman D. Citizen science benefits coral reef restoration activities Journal For Nature Conservation. 40: 94-99. DOI: 10.1016/J.Jnc.2017.09.001  0.422
2017 Zink IC, Browder JA, Lirman D, Serafy JE. Review of salinity effects on abundance, growth, and survival of nearshore life stages of pink shrimp (Farfantepenaeus duorarum) Ecological Indicators. 81: 1-17. DOI: 10.1016/J.Ecolind.2017.05.046  0.367
2017 Schopmeyer SA, Lirman D, Bartels E, Gilliam DS, Goergen EA, Griffin SP, Johnson ME, Lustic C, Maxwell K, Walter CS. Regional restoration benchmarks for Acropora cervicornis Coral Reefs. 36: 1047-1057. DOI: 10.1007/S00338-017-1596-3  0.418
2016 Lirman D, Schopmeyer S. Ecological solutions to reef degradation: optimizing coral reef restoration in the Caribbean and Western Atlantic. Peerj. 4: e2597. PMID 27781176 DOI: 10.7717/Peerj.2597  0.407
2016 Drury C, Dale KE, Panlilio JM, Miller SV, Lirman D, Larson EA, Bartels E, Crawford DL, Oleksiak MF. Genomic variation among populations of threatened coral: Acropora cervicornis. Bmc Genomics. 17: 286. PMID 27076191 DOI: 10.1186/S12864-016-2583-8  0.385
2016 Santos RO, Lirman D, Pittman SJ. Long-term spatial dynamics in vegetated seascapes: Fragmentation and habitat loss in a human-impacted subtropical lagoon Marine Ecology. 37: 200-214. DOI: 10.1111/Maec.12259  0.449
2015 Schopmeyer SA, Lirman D. Occupation Dynamics and Impacts of Damselfish Territoriality on Recovering Populations of the Threatened Staghorn Coral, Acropora cervicornis. Plos One. 10: e0141302. PMID 26580977 DOI: 10.1371/Journal.Pone.0141302  0.448
2015 Lohr KE, Bejarano S, Lirman D, Schopmeyer S, Manfrino C. Optimizing the productivity of a coral nursery focused on staghorn coral Acropora cervicornis Endangered Species Research. 27: 243-250. DOI: 10.3354/Esr00667  0.381
2014 Lirman D, Schopmeyer S, Galvan V, Drury C, Baker AC, Baums IB. Growth dynamics of the threatened Caribbean staghorn coral Acropora cervicornis: influence of host genotype, symbiont identity, colony size, and environmental setting. Plos One. 9: e107253. PMID 25268812 DOI: 10.1371/Journal.Pone.0107253  0.415
2014 Cooper WT, Lirman D, Vangroningen MP, Parkinson JE, Herlan J, McManus JW. Assessing techniques to enhance early post-settlement survival of corals in situ for reef restoration Bulletin of Marine Science. 90: 651-664. DOI: 10.5343/Bms.2013.1020  0.343
2014 Lirman D, Formel N, Schopmeyer S, Ault JS, Smith SG, Gilliam D, Riegl B. Percent recent mortality (PRM) of stony corals as an ecological indicator of coral reef condition Ecological Indicators. 44: 120-127. DOI: 10.1016/J.Ecolind.2013.10.021  0.451
2014 Lirman D, Thyberg T, Santos R, Schopmeyer S, Drury C, Collado-Vides L, Bellmund S, Serafy J. SAV Communities of Western Biscayne Bay, Miami, Florida, USA: Human and Natural Drivers of Seagrass and Macroalgae Abundance and Distribution Along a Continuous Shoreline Estuaries and Coasts. 37: 1243-1255. DOI: 10.1007/S12237-014-9769-6  0.406
2014 Enochs IC, Manzello DP, Carlton R, Schopmeyer S, van Hooidonk R, Lirman D. Effects of light and elevated pCO2 on the growth and photochemical efficiency of Acropora cervicornis Coral Reefs. 33: 477-485. DOI: 10.1007/S00338-014-1132-7  0.31
2013 Serafy J, Gillette P, Miller M, Lirman D, Capo T. Incorporating herbivorous sea urchins in ramet culture of staghorn coral Acropora cervicornis Endangered Species Research. 22: 183-189. DOI: 10.3354/Esr00544  0.357
2013 Collado-Vides L, Avila C, Blair S, Leliaert F, Rodriguez D, Thyberg T, Schneider S, Rojas J, Sweeney P, Drury C, Lirman D. A persistent bloom of Anadyomene J.V. Lamouroux (Anadyomenaceae, Chlorophyta) in Biscayne Bay, Florida Aquatic Botany. 111: 95-103. DOI: 10.1016/J.Aquabot.2013.06.010  0.452
2012 Young CN, Schopmeyer SA, Lirman D. A review of reef restoration and Coral propagation using the threatened genus Acropora in the Caribbean and western Atlantic Bulletin of Marine Science. 88: 1075-1098. DOI: 10.5343/Bms.2011.1143  0.411
2012 Huntington BE, Lirman D. Coral species richness estimates are sensitive to differences in reef size and regional diversity Limnology and Oceanography: Methods. 10: 110-116. DOI: 10.4319/Lom.2012.10.110  0.734
2012 Santos RO, Lirman D. Using habitat suitability models to predict changes in seagrass distribution caused by water management practices Canadian Journal of Fisheries and Aquatic Sciences. 69: 1380-1388. DOI: 10.1139/F2012-018  0.435
2012 Schopmeyer SA, Lirman D, Bartels E, Byrne J, Gilliam DS, Hunt J, Johnson ME, Larson EA, Maxwell K, Nedimyer K, Walter C. In Situ Coral Nurseries Serve as Genetic Repositories for Coral Reef Restoration after an Extreme Cold-Water Event Restoration Ecology. 20: 696-703. DOI: 10.1111/J.1526-100X.2011.00836.X  0.391
2012 Huntington BE, Lirman D. Species-area relationships in coral communities: Evaluating mechanisms for a commonly observed pattern Coral Reefs. 31: 929-938. DOI: 10.1007/S00338-012-0917-9  0.754
2011 Lirman D, Schopmeyer S, Manzello D, Gramer LJ, Precht WF, Muller-Karger F, Banks K, Barnes B, Bartels E, Bourque A, Byrne J, Donahue S, Duquesnel J, Fisher L, Gilliam D, et al. Severe 2010 cold-water event caused unprecedented mortality to corals of the Florida reef tract and reversed previous survivorship patterns. Plos One. 6: e23047. PMID 21853066 DOI: 10.1371/Journal.Pone.0023047  0.333
2011 Avellaneda PM, Englehardt JD, Olascoaga J, Babcock EA, Brand L, Lirman D, Rogge WF, Solo-Gabriele H, Tchobanoglous G. Relative risk assessment of cruise ships biosolids disposal alternatives. Marine Pollution Bulletin. 62: 2157-69. PMID 21821268 DOI: 10.1016/J.Marpolbul.2011.07.006  0.336
2011 Teece MA, Estes B, Gelsleichter E, Lirman D. Heterotrophic and autotrophic assimilation of fatty acids by two scleractinian corals, montastraea faveolata and porites astreoides Limnology and Oceanography. 56: 1285-1296. DOI: 10.4319/Lo.2011.56.4.1285  0.312
2011 Karnauskas M, Huntington BE, Babcock EA, Lirman D. Pre-existing spatial patterns in fish abundances influence species-specific responses in a Caribbean marine reserve Marine Ecology Progress Series. 432: 235-246. DOI: 10.3354/Meps09151  0.738
2011 Santos RO, Lirman D, Serafy JE. Quantifying freshwater-induced fragmentation of submerged aquatic vegetation communities using a multi-scale landscape ecology approach Marine Ecology Progress Series. 427: 233-246. DOI: 10.3354/Meps08996  0.426
2011 Collado-Vides L, Mazzei V, Thyberg T, Lirman D. Spatio-temporal patterns and nutrient status of macroalgae in a heavily managed region of Biscayne Bay, Florida, USA Botanica Marina. 54: 377-390. DOI: 10.1515/Bot.2011.046  0.407
2011 Huntington BE, Karnauskas M, Lirman D. Corals fail to recover at a Caribbean marine reserve despite ten years of reserve designation Coral Reefs. 30: 1077-1085. DOI: 10.1007/S00338-011-0809-4  0.753
2010 Eakin CM, Morgan JA, Heron SF, Smith TB, Liu G, Alvarez-Filip L, Baca B, Bartels E, Bastidas C, Bouchon C, Brandt M, Bruckner AW, Bunkley-Williams L, Cameron A, Causey BD, ... ... Lirman D, et al. Caribbean corals in crisis: record thermal stress, bleaching, and mortality in 2005. Plos One. 5: e13969. PMID 21125021 DOI: 10.1371/Journal.Pone.0013969  0.362
2010 Huntington BE, Karnauskas M, Babcock EA, Lirman D. Untangling natural seascape variation from marine reserve effects using a landscape approach. Plos One. 5: e12327. PMID 20808833 DOI: 10.1371/Journal.Pone.0012327  0.737
2010 Lirman D, Gracias N, Gintert B, Gleason ACR, Deangelo G, Dick M, Martinez E, Reid RP. Damage and recovery assessment of vessel grounding injuries on coral reef habitats by use of georeferenced landscape video mosaics Limnology and Oceanography: Methods. 8: 88-97. DOI: 10.4319/Lom.2010.8.0088  0.76
2010 Lirman D, Thyberg T, Herlan J, Hill C, Young-Lahiff C, Schopmeyer S, Huntington B, Santos R, Drury C. Propagation of the threatened staghorn coral Acropora cervicornis: Methods to minimize the impacts of fragment collection and maximize production Coral Reefs. 29: 729-735. DOI: 10.1007/S00338-010-0621-6  0.709
2010 Gleason ACR, Gracias N, Lirman D, Gintert BE, Smith TB, Dick MC, Reid RP. Landscape video mosaic from a mesophotic coral reef Coral Reefs. 29: 253-253. DOI: 10.1007/S00338-009-0544-2  0.742
2010 Lirman D, Bowden-Kerby A, Schopmeyer S, Huntington B, Thyberg T, Gough M, Gough T, Gough R, Gough Y. A window to the past: Documenting the status of one of the last remaining 'megapopulations' of the threatened staghorn coral Acropora cervicornis in the Dominican Republic Aquatic Conservation: Marine and Freshwater Ecosystems. 20: 773-781. DOI: 10.1002/Aqc.1146  0.732
2009 Lirman D, Manzello D. Patterns of resistance and resilience of the stress-tolerant coral Siderastrea radians (Pallas) to sub-optimal salinity and sediment burial Journal of Experimental Marine Biology and Ecology. 369: 72-77. DOI: 10.1016/J.Jembe.2008.10.024  0.398
2008 Lirman D, Deangelo G, Serafy JE, Hazra A, Hazra DS, Brown A. Geospatial video monitoring of nearshore benthic habitats of western Biscayne Bay (Florida) using the shallow-water positioning system (SWaPS) Journal of Coastal Research. 24: 135-145. DOI: 10.2112/04-0428.1  0.476
2008 Lirman D, Deangelo G, Serafy J, Hazra A, Smith Hazra D, Herlan J, Luo J, Bellmund S, Wang J, Clausing R. Seasonal changes in the abundance and distribution of submerged aquatic vegetation in a highly managed coastal lagoon Hydrobiologia. 596: 105-120. DOI: 10.1007/S10750-007-9061-X  0.449
2007 Manzello DP, Brandt M, Smith TB, Lirman D, Hendee JC, Nemeth RS. Hurricanes benefit bleached corals. Proceedings of the National Academy of Sciences of the United States of America. 104: 12035-9. PMID 17606914 DOI: 10.1073/Pnas.0701194104  0.384
2007 Lirman D, Fong P. Is proximity to land-based sources of coral stressors an appropriate measure of risk to coral reefs? An example from the Florida Reef Tract. Marine Pollution Bulletin. 54: 779-91. PMID 17303183 DOI: 10.1016/J.Marpolbul.2006.12.014  0.482
2007 Lirman D, Gracias NR, Gintert BE, Gleason AC, Reid RP, Negahdaripour S, Kramer P. Development and application of a video-mosaic survey technology to document the status of coral reef communities. Environmental Monitoring and Assessment. 125: 59-73. PMID 16927193 DOI: 10.1007/S10661-006-9239-0  0.762
2007 Gleason ACR, Lirman D, Williams D, Gracias NR, Gintert BE, Madjidi H, Pamela Reid R, Boynton GC, Negahdaripour S, Miller M, Kramer P. Documenting hurricane impacts on coral reefs using two-dimensional video-mosaic technology Marine Ecology. 28: 254-258. DOI: 10.1111/J.1439-0485.2006.00140.X  0.761
2003 Lirman D, Miller MW. Modeling and monitoring tools to assess recovery status and convergence rates between restored and undisturbed coral reef habitats Restoration Ecology. 11: 448-456. DOI: 10.1046/J.1526-100X.2003.Rec0286.X  0.449
2003 Lirman D. A simulation model of the population dynamics of the branching coral Acropora palmata effects of storm intensity and frequency Ecological Modelling. 161: 169-182. DOI: 10.1016/S0304-3800(02)00346-0  0.344
2003 Lirman D, Cropper WP. The influence of salinity on seagrass growth, survivorship, and distribution within Biscayne Bay, Florida: Field, experimental, and modeling studies Estuaries. 26: 131-141. DOI: 10.1007/Bf02691700  0.408
2003 Lirman D, Orlando B, Maciá S, Manzello D, Kaufman L, Biber P, Jones T. Coral communities of Biscayne Bay, Florida and adjacent offshore areas: Diversity, abundance, distribution, and environmental correlates Aquatic Conservation: Marine and Freshwater Ecosystems. 13: 121-135. DOI: 10.1002/Aqc.552  0.471
2002 Irlandi E, Orlando B, Maciá S, Biber P, Jones T, Kaufman L, Lirman D, Patterson ET. The influence of freshwater runoff on biomass, morphometrics, and production of Thalassia testudinum Aquatic Botany. 72: 67-78. DOI: 10.1016/S0304-3770(01)00217-0  0.362
2001 Gentile JH, Harwell MA, Cropper W, Harwell CC, DeAngelis D, Davis S, Ogden JC, Lirman D. Ecological conceptual models: a framework and case study on ecosystem management for South Florida sustainability. The Science of the Total Environment. 274: 231-53. PMID 11453300 DOI: 10.1016/S0048-9697(01)00746-X  0.348
2001 Lirman D. Competition between macroalgae and corals: Effects of herbivore exclusion and increased algal biomass on coral survivorship and growth Coral Reefs. 19: 392-399. DOI: 10.1007/S003380000125  0.398
2000 Lirman D, Biber P. Seasonal dynamics of macroalgal communities of the Northern Florida Reef Tract Botanica Marina. 43: 305-314. DOI: 10.1515/Bot.2000.033  0.464
2000 Lirman D. Fragmentation in the branching coral Acropora palmata (Lamarck): Growth, survivorship, and reproduction of colonies and fragments Journal of Experimental Marine Biology and Ecology. 251: 41-57. DOI: 10.1016/S0022-0981(00)00205-7  0.383
1999 Lirman D. Reef fish communities associated with Acropora palmata: Relationships to benthic attributes Bulletin of Marine Science. 65: 235-252.  0.382
1998 Glynn PW, Lirman D, Baker AC, Morales GEL. First documented hurricane strikes on eastern Pacific coral reefs reveal only slight damage Coral Reefs. 17: 368. DOI: 10.1007/S003380050140  0.359
1997 Fong P, Jacobson ME, Mescher MC, Lirman D, Harwell MC. Investigating the management potential of a seagrass model through sensitivity analysis and experiments Ecological Applications. 7: 300-315. DOI: 10.1890/1051-0761(1997)007[0300:Itmpoa]2.0.Co;2  0.346
1995 Fong P, Lirman D. Hurricanes cause population expansion of the branching coral Acropora palmata (Scleractinia): wound healing and growth patterns of asexual recruits Marine Ecology. 16: 317-335. DOI: 10.1111/J.1439-0485.1995.Tb00415.X  0.319
1994 Lirman D. Ontogenetic shifts in habitat preferences in the three-spot damselfish, Stegasees planifions (Cuvier), in Roatan Island, Honduras Journal of Experimental Marine Biology and Ecology. 180: 71-81. DOI: 10.1016/0022-0981(94)90080-9  0.363
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