Year |
Citation |
Score |
2017 |
Chowdhury A, Sevinsky CJ, Santamaria-Pang A, Yener B. A computational study on convolutional feature combination strategies for grade classification in colon cancer using fluorescence microscopy data Proceedings of Spie. 10140. DOI: 10.1117/12.2255687 |
0.308 |
|
2016 |
Dhulekar N, Ray S, Yuan D, Baskaran A, Oztan B, Larsen M, Yener B. Prediction of Growth Factor-Dependent Cleft Formation During Branching Morphogenesis Using A Dynamic Graph-Based Growth Model. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 13: 350-64. PMID 27070978 DOI: 10.1109/Tcbb.2015.2452916 |
0.314 |
|
2016 |
Yener B. Cell-graphs Communications of the Acm. 60: 74-84. DOI: 10.1145/2960404 |
0.313 |
|
2016 |
Dhulekar N, Oztan B, Yener B. Model coupling for predicting a developmental patterning process Proceedings of Spie. 9791: 979104. DOI: 10.1117/12.2217528 |
0.318 |
|
2012 |
Ozcaglar C, Shabbeer A, Kurepina N, Rastogi N, Yener B, Bennett KP. Inferred spoligoforest topology unravels spatially bimodal distribution of mutations in the DR region. Ieee Transactions On Nanobioscience. 11: 191-202. PMID 22987125 DOI: 10.1109/Tnb.2012.2213265 |
0.752 |
|
2012 |
Acar E, Plopper GE, Yener B. Coupled analysis of in vitro and histology tissue samples to quantify structure-function relationship Plos One. 7. PMID 22479315 DOI: 10.1371/Journal.Pone.0032227 |
0.324 |
|
2012 |
Shabbeer A, Cowan LS, Ozcaglar C, Rastogi N, Vandenberg SL, Yener B, Bennett KP. TB-Lineage: An online tool for classification and analysis of strains of Mycobacterium tuberculosis complex Infection, Genetics and Evolution. 12: 789-797. PMID 22406225 DOI: 10.1016/J.Meegid.2012.02.010 |
0.768 |
|
2012 |
Bilgin CC, Ray S, Baydil B, Daley WP, Larsen M, Yener B. Multiscale feature analysis of salivary gland branching morphogenesis. Plos One. 7: e32906. PMID 22403724 DOI: 10.1371/Journal.Pone.0032906 |
0.709 |
|
2012 |
Ozcaglar C, Shabbeer A, Vandenberg SL, Yener B, Bennett KP. Epidemiological models of Mycobacterium tuberculosis complex infections. Mathematical Biosciences. 236: 77-96. PMID 22387570 DOI: 10.1016/J.Mbs.2012.02.003 |
0.753 |
|
2012 |
Sequeira SJ, Soscia DA, Oztan B, Mosier AP, Jean-Gilles R, Gadre A, Cady NC, Yener B, Castracane J, Larsen M. The regulation of focal adhesion complex formation and salivary gland epithelial cell organization by nanofibrous PLGA scaffolds. Biomaterials. 33: 3175-86. PMID 22285464 DOI: 10.1016/J.Biomaterials.2012.01.010 |
0.303 |
|
2012 |
Shabbeer A, Ozcaglar C, Yener B, Bennett KP. Web tools for molecular epidemiology of tuberculosis. Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. 12: 767-81. PMID 21903179 DOI: 10.1016/J.Meegid.2011.08.019 |
0.763 |
|
2012 |
Oztan B, Kong H, Gürcan MN, Yener B. Follicular lymphoma grading using cell-graphs and multi-scale feature analysis Progress in Biomedical Optics and Imaging - Proceedings of Spie. 8315. DOI: 10.1117/12.911360 |
0.352 |
|
2012 |
Li G, Semerci M, Yener B, Zaki MJ. Effective graph classification based on topological and label attributes Statistical Analysis and Data Mining. 5: 265-283. DOI: 10.1002/Sam.11153 |
0.33 |
|
2011 |
Ozcaglar C, Shabbeer A, Kurepina N, Yener B, Bennett KP. Data-driven insights into deletions of Mycobacterium tuberculosis complex chromosomal DR region using spoligoforests. Proceedings. Ieee International Conference On Bioinformatics and Biomedicine. 75-82. PMID 22343484 DOI: 10.1109/BIBM.2011.64 |
0.751 |
|
2011 |
Ozcaglar C, Shabbeer A, Vandenberg S, Yener B, Bennett KP. Sublineage structure analysis of Mycobacterium tuberculosis complex strains using multiple-biomarker tensors. Bmc Genomics. 12: S1. PMID 21988942 DOI: 10.1186/1471-2164-12-S2-S1 |
0.767 |
|
2011 |
McKeen-Polizzotti L, Henderson KM, Oztan B, Bilgin CC, Yener B, Plopper GE. Quantitative metric profiles capture three-dimensional temporospatial architecture to discriminate cellular functional states. Bmc Medical Imaging. 11: 11. PMID 21599975 DOI: 10.1186/1471-2342-11-11 |
0.691 |
|
2011 |
Oztan B, Polizzotti LM, Bilgin CC, Henderson KM, Plopper GE, Yener B. Classification of breast cancer grades through quantitative characterization of ductal structure morphology in three-dimensional cultures 2011 Acm Conference On Bioinformatics, Computational Biology and Biomedicine, Bcb 2011. 153-161. DOI: 10.1145/2147805.2147822 |
0.671 |
|
2011 |
Shabbeer A, Ozcaglar C, Yener B, Bennett KP. Preserving proximity relations and minimizing edge-crossings in high dimensional graph visualizations 1st Ieee Symposium On Large-Scale Data Analysis and Visualization 2011, Ldav 2011 - Proceedings. 131-132. DOI: 10.1109/LDAV.2011.6092334 |
0.762 |
|
2011 |
Bennett KP, Ozcaglar C, Ranganathan J, Raghavan S, Katz J, Croft D, Yener B, Shabbeer A. Visualization of tuberculosis patient and Mycobacterium tuberculosis complex genotype data via host-pathogen maps 2011 Ieee International Conference On Bioinformatics and Biomedicine Workshops, Bibmw 2011. 124-129. DOI: 10.1109/BIBMW.2011.6112364 |
0.755 |
|
2010 |
Ozcaglar C, Shabbeer A, Vandenberg S, Yener B, Bennett KP. Examining the sublineage structure of Mycobacterium tuberculosis complex strains with multiple-biomarker tensors. Proceedings. Ieee International Conference On Bioinformatics and Biomedicine. 543-548. PMID 22466374 DOI: 10.1109/BIBM.2010.5706625 |
0.752 |
|
2010 |
Bilgin CC, Lund AW, Can A, Plopper GE, Yener B. Quantification of three-dimensional cell-mediated collagen remodeling using graph theory. Plos One. 5. PMID 20927339 DOI: 10.1371/Journal.Pone.0012783 |
0.69 |
|
2010 |
Bilgin CC, Ray S, Daley WP, Baydil B, Sequeira SJ, Yener B, Larsen M. Cell-graph modeling of salivary gland morphology 2010 7th Ieee International Symposium On Biomedical Imaging: From Nano to Macro, Isbi 2010 - Proceedings. 1427-1430. DOI: 10.1109/ISBI.2010.5490267 |
0.689 |
|
2009 |
Bilgin CC, Bullough P, Plopper GE, Yener B. ECM-Aware Cell-Graph Mining for Bone Tissue Modeling and Classification. Data Mining and Knowledge Discovery. 20: 416-438. PMID 20543911 DOI: 10.1007/S10618-009-0153-2 |
0.715 |
|
2009 |
Lund AW, Bilgin CC, Hasan MA, McKeen LM, Stegemann JP, Yener B, Zaki MJ, Plopper GE. Quantification of spatial parameters in 3D cellular constructs using graph theory. Journal of Biomedicine & Biotechnology. 2009: 928286. PMID 19920859 DOI: 10.1155/2009/928286 |
0.704 |
|
2009 |
Sivrikaya F, Yener B. Minimum delay routing for wireless networks with STDMA Wireless Networks. 15: 755-772. DOI: 10.1007/S11276-007-0073-2 |
0.658 |
|
2008 |
Yener B, Acar E, Aguis P, Bennett K, Vandenberg SL, Plopper GE. Multiway modeling and analysis in stem cell systems biology. Bmc Systems Biology. 2: 63. PMID 18625054 DOI: 10.1186/1752-0509-2-63 |
0.312 |
|
2008 |
Sivrikaya F, Albayrak S, Yener B. Spatially limited contention for multi-hop wireless networks Globecom - Ieee Global Telecommunications Conference. 228-233. DOI: 10.1109/GLOCOM.2008.ECP.52 |
0.624 |
|
2008 |
Busch C, Magdon-Ismail M, Sivrikaya F, Yener B. Contention-free MAC protocols for asynchronous wireless sensor networks Distributed Computing. 21: 23-42. DOI: 10.1007/S00446-007-0053-X |
0.661 |
|
2008 |
Sivrikaya F, Yener B. Time Synchronization Wireless Sensor Networks: a Networking Perspective. 285-306. DOI: 10.1002/9780470443521.ch9 |
0.565 |
|
2007 |
Çamtepe SA, Yener B. Combinatorial design of key distribution mechanisms for wireless sensor networks Ieee/Acm Transactions On Networking. 15: 346-358. DOI: 10.1109/Tnet.2007.892879 |
0.689 |
|
2007 |
Yener B, Magdon-Ismail M, Sivrikaya F. Joint problem of power optimal connectivity and coverage in wireless sensor networks Wireless Networks. 13: 537-550. DOI: 10.1007/S11276-006-5875-0 |
0.652 |
|
2007 |
Edman M, Sivrikaya F, Yener B. A combinatorial approach to measuring anonymity Isi 2007: 2007 Ieee Intelligence and Security Informatics. 357-364. |
0.613 |
|
2005 |
Demir C, Gultekin SH, Yener B. Learning the topological properties of brain tumors. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 2: 262-70. PMID 17044189 DOI: 10.1109/Tcbb.2005.42 |
0.353 |
|
2005 |
Demir C, Gultekin SH, Yener B. Augmented cell-graphs for automated cancer diagnosis. Bioinformatics (Oxford, England). 21: ii7-12. PMID 16204128 DOI: 10.1093/Bioinformatics/Bti1100 |
0.361 |
|
2005 |
Chapanond A, Krishnamoorthy MS, Yener B. Graph theoretic and spectral analysis of Enron email data Computational and Mathematical Organization Theory. 11: 265-281. DOI: 10.1007/S10588-005-5381-4 |
0.345 |
|
2004 |
Gunduz C, Yener B, Gultekin SH. The cell graphs of cancer. Bioinformatics (Oxford, England). 20: i145-51. PMID 15262793 DOI: 10.1093/bioinformatics/bth933 |
0.613 |
|
2004 |
Sivrikaya F, Yener B. Time synchronization in sensor networks: A survey Ieee Network. 18: 45-50. DOI: 10.1109/Mnet.2004.1316761 |
0.644 |
|
2004 |
Busch C, Magdon-Ismail M, Sivrikaya F, Yener B. Contention-free MAC protocols for wireless sensor networks Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 3274: 245-259. |
0.635 |
|
2003 |
Song Y, Wool A, Yener B. Combinatorial design of multi-ring networks with combined routing and flow control Computer Networks. 41: 247-267. DOI: 10.1016/S1389-1286(02)00395-X |
0.311 |
|
2002 |
Kumar A, Rastogi R, Silberschatz A, Yener B. Algorithms for provisioning virtual private networks in the hose model Ieee/Acm Transactions On Networking. 10: 565-578. DOI: 10.1109/Tnet.2002.802141 |
0.335 |
|
1995 |
Yener B, Boult TE. Flow trees: A lower bound computation tool with applications. to rearrangeable multihop lightwave network optimization Journal of High Speed Networks. 4: 99-113. DOI: 10.3233/Jhs-1995-4107 |
0.534 |
|
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