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Bulent Yener - Publications

Affiliations: 
Rensselaer Polytechnic Institute, Troy, NY, United States 
Area:
Computer Science
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41 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2017 Chowdhury A, Sevinsky CJ, Santamaria-Pang A, Yener B. A computational study on convolutional feature combination strategies for grade classification in colon cancer using fluorescence microscopy data Proceedings of Spie. 10140. DOI: 10.1117/12.2255687  0.308
2016 Dhulekar N, Ray S, Yuan D, Baskaran A, Oztan B, Larsen M, Yener B. Prediction of Growth Factor-Dependent Cleft Formation During Branching Morphogenesis Using A Dynamic Graph-Based Growth Model. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 13: 350-64. PMID 27070978 DOI: 10.1109/Tcbb.2015.2452916  0.314
2016 Yener B. Cell-graphs Communications of the Acm. 60: 74-84. DOI: 10.1145/2960404  0.313
2016 Dhulekar N, Oztan B, Yener B. Model coupling for predicting a developmental patterning process Proceedings of Spie. 9791: 979104. DOI: 10.1117/12.2217528  0.318
2012 Ozcaglar C, Shabbeer A, Kurepina N, Rastogi N, Yener B, Bennett KP. Inferred spoligoforest topology unravels spatially bimodal distribution of mutations in the DR region. Ieee Transactions On Nanobioscience. 11: 191-202. PMID 22987125 DOI: 10.1109/Tnb.2012.2213265  0.752
2012 Acar E, Plopper GE, Yener B. Coupled analysis of in vitro and histology tissue samples to quantify structure-function relationship Plos One. 7. PMID 22479315 DOI: 10.1371/Journal.Pone.0032227  0.324
2012 Shabbeer A, Cowan LS, Ozcaglar C, Rastogi N, Vandenberg SL, Yener B, Bennett KP. TB-Lineage: An online tool for classification and analysis of strains of Mycobacterium tuberculosis complex Infection, Genetics and Evolution. 12: 789-797. PMID 22406225 DOI: 10.1016/J.Meegid.2012.02.010  0.768
2012 Bilgin CC, Ray S, Baydil B, Daley WP, Larsen M, Yener B. Multiscale feature analysis of salivary gland branching morphogenesis. Plos One. 7: e32906. PMID 22403724 DOI: 10.1371/Journal.Pone.0032906  0.709
2012 Ozcaglar C, Shabbeer A, Vandenberg SL, Yener B, Bennett KP. Epidemiological models of Mycobacterium tuberculosis complex infections. Mathematical Biosciences. 236: 77-96. PMID 22387570 DOI: 10.1016/J.Mbs.2012.02.003  0.753
2012 Sequeira SJ, Soscia DA, Oztan B, Mosier AP, Jean-Gilles R, Gadre A, Cady NC, Yener B, Castracane J, Larsen M. The regulation of focal adhesion complex formation and salivary gland epithelial cell organization by nanofibrous PLGA scaffolds. Biomaterials. 33: 3175-86. PMID 22285464 DOI: 10.1016/J.Biomaterials.2012.01.010  0.303
2012 Shabbeer A, Ozcaglar C, Yener B, Bennett KP. Web tools for molecular epidemiology of tuberculosis. Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. 12: 767-81. PMID 21903179 DOI: 10.1016/J.Meegid.2011.08.019  0.763
2012 Oztan B, Kong H, Gürcan MN, Yener B. Follicular lymphoma grading using cell-graphs and multi-scale feature analysis Progress in Biomedical Optics and Imaging - Proceedings of Spie. 8315. DOI: 10.1117/12.911360  0.352
2012 Li G, Semerci M, Yener B, Zaki MJ. Effective graph classification based on topological and label attributes Statistical Analysis and Data Mining. 5: 265-283. DOI: 10.1002/Sam.11153  0.33
2011 Ozcaglar C, Shabbeer A, Kurepina N, Yener B, Bennett KP. Data-driven insights into deletions of Mycobacterium tuberculosis complex chromosomal DR region using spoligoforests. Proceedings. Ieee International Conference On Bioinformatics and Biomedicine. 75-82. PMID 22343484 DOI: 10.1109/BIBM.2011.64  0.751
2011 Ozcaglar C, Shabbeer A, Vandenberg S, Yener B, Bennett KP. Sublineage structure analysis of Mycobacterium tuberculosis complex strains using multiple-biomarker tensors. Bmc Genomics. 12: S1. PMID 21988942 DOI: 10.1186/1471-2164-12-S2-S1  0.767
2011 McKeen-Polizzotti L, Henderson KM, Oztan B, Bilgin CC, Yener B, Plopper GE. Quantitative metric profiles capture three-dimensional temporospatial architecture to discriminate cellular functional states. Bmc Medical Imaging. 11: 11. PMID 21599975 DOI: 10.1186/1471-2342-11-11  0.691
2011 Oztan B, Polizzotti LM, Bilgin CC, Henderson KM, Plopper GE, Yener B. Classification of breast cancer grades through quantitative characterization of ductal structure morphology in three-dimensional cultures 2011 Acm Conference On Bioinformatics, Computational Biology and Biomedicine, Bcb 2011. 153-161. DOI: 10.1145/2147805.2147822  0.671
2011 Shabbeer A, Ozcaglar C, Yener B, Bennett KP. Preserving proximity relations and minimizing edge-crossings in high dimensional graph visualizations 1st Ieee Symposium On Large-Scale Data Analysis and Visualization 2011, Ldav 2011 - Proceedings. 131-132. DOI: 10.1109/LDAV.2011.6092334  0.762
2011 Bennett KP, Ozcaglar C, Ranganathan J, Raghavan S, Katz J, Croft D, Yener B, Shabbeer A. Visualization of tuberculosis patient and Mycobacterium tuberculosis complex genotype data via host-pathogen maps 2011 Ieee International Conference On Bioinformatics and Biomedicine Workshops, Bibmw 2011. 124-129. DOI: 10.1109/BIBMW.2011.6112364  0.755
2010 Ozcaglar C, Shabbeer A, Vandenberg S, Yener B, Bennett KP. Examining the sublineage structure of Mycobacterium tuberculosis complex strains with multiple-biomarker tensors. Proceedings. Ieee International Conference On Bioinformatics and Biomedicine. 543-548. PMID 22466374 DOI: 10.1109/BIBM.2010.5706625  0.752
2010 Bilgin CC, Lund AW, Can A, Plopper GE, Yener B. Quantification of three-dimensional cell-mediated collagen remodeling using graph theory. Plos One. 5. PMID 20927339 DOI: 10.1371/Journal.Pone.0012783  0.69
2010 Bilgin CC, Ray S, Daley WP, Baydil B, Sequeira SJ, Yener B, Larsen M. Cell-graph modeling of salivary gland morphology 2010 7th Ieee International Symposium On Biomedical Imaging: From Nano to Macro, Isbi 2010 - Proceedings. 1427-1430. DOI: 10.1109/ISBI.2010.5490267  0.689
2009 Bilgin CC, Bullough P, Plopper GE, Yener B. ECM-Aware Cell-Graph Mining for Bone Tissue Modeling and Classification. Data Mining and Knowledge Discovery. 20: 416-438. PMID 20543911 DOI: 10.1007/S10618-009-0153-2  0.715
2009 Lund AW, Bilgin CC, Hasan MA, McKeen LM, Stegemann JP, Yener B, Zaki MJ, Plopper GE. Quantification of spatial parameters in 3D cellular constructs using graph theory. Journal of Biomedicine & Biotechnology. 2009: 928286. PMID 19920859 DOI: 10.1155/2009/928286  0.704
2009 Sivrikaya F, Yener B. Minimum delay routing for wireless networks with STDMA Wireless Networks. 15: 755-772. DOI: 10.1007/S11276-007-0073-2  0.658
2008 Yener B, Acar E, Aguis P, Bennett K, Vandenberg SL, Plopper GE. Multiway modeling and analysis in stem cell systems biology. Bmc Systems Biology. 2: 63. PMID 18625054 DOI: 10.1186/1752-0509-2-63  0.312
2008 Sivrikaya F, Albayrak S, Yener B. Spatially limited contention for multi-hop wireless networks Globecom - Ieee Global Telecommunications Conference. 228-233. DOI: 10.1109/GLOCOM.2008.ECP.52  0.624
2008 Busch C, Magdon-Ismail M, Sivrikaya F, Yener B. Contention-free MAC protocols for asynchronous wireless sensor networks Distributed Computing. 21: 23-42. DOI: 10.1007/S00446-007-0053-X  0.661
2008 Sivrikaya F, Yener B. Time Synchronization Wireless Sensor Networks: a Networking Perspective. 285-306. DOI: 10.1002/9780470443521.ch9  0.565
2007 Çamtepe SA, Yener B. Combinatorial design of key distribution mechanisms for wireless sensor networks Ieee/Acm Transactions On Networking. 15: 346-358. DOI: 10.1109/Tnet.2007.892879  0.689
2007 Yener B, Magdon-Ismail M, Sivrikaya F. Joint problem of power optimal connectivity and coverage in wireless sensor networks Wireless Networks. 13: 537-550. DOI: 10.1007/S11276-006-5875-0  0.652
2007 Edman M, Sivrikaya F, Yener B. A combinatorial approach to measuring anonymity Isi 2007: 2007 Ieee Intelligence and Security Informatics. 357-364.  0.613
2005 Demir C, Gultekin SH, Yener B. Learning the topological properties of brain tumors. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 2: 262-70. PMID 17044189 DOI: 10.1109/Tcbb.2005.42  0.353
2005 Demir C, Gultekin SH, Yener B. Augmented cell-graphs for automated cancer diagnosis. Bioinformatics (Oxford, England). 21: ii7-12. PMID 16204128 DOI: 10.1093/Bioinformatics/Bti1100  0.361
2005 Chapanond A, Krishnamoorthy MS, Yener B. Graph theoretic and spectral analysis of Enron email data Computational and Mathematical Organization Theory. 11: 265-281. DOI: 10.1007/S10588-005-5381-4  0.345
2004 Gunduz C, Yener B, Gultekin SH. The cell graphs of cancer. Bioinformatics (Oxford, England). 20: i145-51. PMID 15262793 DOI: 10.1093/bioinformatics/bth933  0.613
2004 Sivrikaya F, Yener B. Time synchronization in sensor networks: A survey Ieee Network. 18: 45-50. DOI: 10.1109/Mnet.2004.1316761  0.644
2004 Busch C, Magdon-Ismail M, Sivrikaya F, Yener B. Contention-free MAC protocols for wireless sensor networks Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 3274: 245-259.  0.635
2003 Song Y, Wool A, Yener B. Combinatorial design of multi-ring networks with combined routing and flow control Computer Networks. 41: 247-267. DOI: 10.1016/S1389-1286(02)00395-X  0.311
2002 Kumar A, Rastogi R, Silberschatz A, Yener B. Algorithms for provisioning virtual private networks in the hose model Ieee/Acm Transactions On Networking. 10: 565-578. DOI: 10.1109/Tnet.2002.802141  0.335
1995 Yener B, Boult TE. Flow trees: A lower bound computation tool with applications. to rearrangeable multihop lightwave network optimization Journal of High Speed Networks. 4: 99-113. DOI: 10.3233/Jhs-1995-4107  0.534
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