| Year |
Citation |
Score |
| 2024 |
Zhou X, Shen X, Johnson JS, Spakowicz DJ, Agnello M, Zhou W, Avina M, Honkala A, Chleilat F, Chen SJ, Cha K, Leopold S, Zhu C, Chen L, Lyu L, ... ... Weinstock GM, et al. Longitudinal profiling of the microbiome at four body sites reveals core stability and individualized dynamics during health and disease. Biorxiv : the Preprint Server For Biology. PMID 38352363 DOI: 10.1101/2024.02.01.577565 |
0.383 |
|
| 2023 |
Tran TDB, Monroy Hernandez C, Nguyen H, Wright S, Tarantino LM, Chesler EJ, Weinstock GM, Zhou Y, Bubier JA. The microbial community dynamics of cocaine sensitization in two behaviorally divergent strains of collaborative cross mice. Genes, Brain, and Behavior. e12845. PMID 37114320 DOI: 10.1111/gbb.12845 |
0.603 |
|
| 2022 |
Binh Tran TD, Nguyen H, Sodergren E, Addiction CFSNO, Dickson PE, Wright SN, Philip VM, Weinstock GM, Chesler EJ, Zhou Y, Bubier JA. Microbial glutamate metabolism predicts intravenous cocaine self-administration in diversity outbred mice. Neuropharmacology. 109409. PMID 36592885 DOI: 10.1016/j.neuropharm.2022.109409 |
0.605 |
|
| 2022 |
Zhou X, Wang B, Demkowicz PC, Johnson JS, Chen Y, Spakowicz DJ, Zhou Y, Dorsett Y, Chen L, Sodergren E, Kuchel GA, Weinstock GM. Exploratory studies of oral and fecal microbiome in healthy human aging. Frontiers in Aging. 3: 1002405. PMID 36338834 DOI: 10.3389/fragi.2022.1002405 |
0.313 |
|
| 2021 |
Russell JT, Zhou Y, Weinstock GM, Bubier JA. The Gut Microbiome and Substance Use Disorder. Frontiers in Neuroscience. 15: 725500. PMID 34531718 DOI: 10.3389/fnins.2021.725500 |
0.604 |
|
| 2021 |
Bubier JA, Chesler EJ, Weinstock GM. Host genetic control of gut microbiome composition. Mammalian Genome : Official Journal of the International Mammalian Genome Society. PMID 34159422 DOI: 10.1007/s00335-021-09884-2 |
0.628 |
|
| 2020 |
Zhou X, Johnson JS, Spakowicz D, Zhou W, Zhou Y, Sodergren E, Snyder M, Weinstock GM. Longitudinal Analysis of Serum Cytokine Levels and Gut Microbial Abundance Links IL-17/IL-22 with and Insulin Sensitivity in Humans. Diabetes. PMID 32366680 DOI: 10.2337/Db19-0592 |
0.431 |
|
| 2020 |
Rosa BA, Mihindukulasuriya K, Hallsworth-Pepin K, Wollam A, Martin J, Snowden C, Dunne WM, Weinstock GM, Burnham CA, Mitreva M. Improving Characterization of Understudied Human Microbiomes Using Targeted Phylogenetics. Msystems. 5. PMID 32098835 DOI: 10.1128/mSystems.00096-20 |
0.34 |
|
| 2020 |
Bubier JA, Philip VM, Quince C, Campbell J, Zhou Y, Vishnivetskaya T, Duvvuru S, Hageman Blair R, Ndukum J, Donohue KD, Foster CM, Mellert DJ, Weinstock G, Culiat CT, O'Hara B, et al. A Microbe Associated with Sleep Revealed by a Novel Systems-Genetic Analysis of the Microbiome in Collaborative Cross Mice. Genetics. PMID 31896565 DOI: 10.1534/Genetics.119.303013 |
0.657 |
|
| 2019 |
Yang D, Johnson J, Zhou X, Deych E, Shands B, Hanson B, Sodergren E, Weinstock G, Shannon WD. New statistical method identifies cytokines that distinguish stool microbiomes. Scientific Reports. 9: 20082. PMID 31882682 DOI: 10.1038/S41598-019-56397-9 |
0.325 |
|
| 2019 |
Johnson JS, Spakowicz DJ, Hong BY, Petersen LM, Demkowicz P, Chen L, Leopold SR, Hanson BM, Agresta HO, Gerstein M, Sodergren E, Weinstock GM. Evaluation of 16S rRNA gene sequencing for species and strain-level microbiome analysis. Nature Communications. 10: 5029. PMID 31695033 DOI: 10.1038/S41467-019-13036-1 |
0.469 |
|
| 2019 |
Zhou W, Sailani MR, Contrepois K, Zhou Y, Ahadi S, Leopold SR, Zhang MJ, Rao V, Avina M, Mishra T, Johnson J, Lee-McMullen B, Chen S, Metwally AA, Tran TDB, ... ... Weinstock GM, et al. Longitudinal multi-omics of host-microbe dynamics in prediabetes. Nature. 569: 663-671. PMID 31142858 DOI: 10.1038/S41586-019-1236-X |
0.509 |
|
| 2019 |
Schüssler-Fiorenza Rose SM, Contrepois K, Moneghetti KJ, Zhou W, Mishra T, Mataraso S, Dagan-Rosenfeld O, Ganz AB, Dunn J, Hornburg D, Rego S, Perelman D, Ahadi S, Sailani MR, Zhou Y, ... ... Weinstock GM, et al. A longitudinal big data approach for precision health. Nature Medicine. 25: 792-804. PMID 31068711 DOI: 10.1038/S41591-019-0414-6 |
0.412 |
|
| 2019 |
Sarsani VK, Raghupathy N, Fiddes IT, Armstrong J, Thibaud-Nissen F, Zinder O, Bolisetty M, Howe K, Hinerfeld D, Ruan X, Rowe L, Barter M, Ananda G, Paten B, Weinstock GM, et al. The Genome of C57BL/6J "Eve", the Mother of the Laboratory Mouse Genome Reference Strain. G3 (Bethesda, Md.). PMID 30996023 DOI: 10.1534/G3.119.400071 |
0.409 |
|
| 2019 |
Saha S, Johnson J, Pal S, Weinstock G, Rajasekaran S. MSC: a metagenomic sequence classification algorithm. Bioinformatics (Oxford, England). PMID 30649204 DOI: 10.1093/Bioinformatics/Bty1071 |
0.382 |
|
| 2019 |
Belcaid M, Casaburi G, McAnulty SJ, Schmidbaur H, Suria AM, Moriano-Gutierrez S, Pankey MS, Oakley TH, Kremer N, Koch EJ, Collins AJ, Nguyen H, Lek S, Goncharenko-Foster I, Minx P, ... ... Weinstock G, et al. Symbiotic organs shaped by distinct modes of genome evolution in cephalopods. Proceedings of the National Academy of Sciences of the United States of America. PMID 30635418 DOI: 10.1073/Pnas.1817322116 |
0.378 |
|
| 2018 |
Cook LE, Gang SS, Ihlan A, Maune M, Tanner RS, McInerney MJ, Weinstock G, Lobos EA, Gunsalus RP. Genome Sequence of Acetomicrobium hydrogeniformans OS1. Genome Announcements. 6. PMID 29954899 DOI: 10.1128/Genomea.00581-18 |
0.379 |
|
| 2018 |
Cignarella F, Cantoni C, Ghezzi L, Salter A, Dorsett Y, Chen L, Phillips D, Weinstock GM, Fontana L, Cross AH, Zhou Y, Piccio L. Intermittent Fasting Confers Protection in CNS Autoimmunity by Altering the Gut Microbiota. Cell Metabolism. 27: 1222-1235.e6. PMID 29874567 DOI: 10.1016/J.Cmet.2018.05.006 |
0.309 |
|
| 2018 |
Schechter LM, Creely DP, Garner CD, Shortridge D, Nguyen H, Chen L, Hanson BM, Sodergren E, Weinstock GM, Dunne WM, van Belkum A, Leopold SR. Extensive Gene Amplification as a Mechanism for Piperacillin-Tazobactam Resistance in Escherichia coli. Mbio. 9. PMID 29691340 DOI: 10.1128/Mbio.00583-18 |
0.431 |
|
| 2018 |
Bowers RM, Kyrpides NC, Stepanauskas R, Harmon-Smith M, Doud D, Reddy TBK, Schulz F, Jarett J, Rivers AR, Eloe-Fadrosh EA, Tringe SG, Ivanova NN, Copeland A, Clum A, Becraft ED, ... ... Weinstock GM, et al. Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea. Nature Biotechnology. 36: 196. PMID 29406516 DOI: 10.1038/Nbt0218-196A |
0.349 |
|
| 2018 |
Piening BD, Zhou W, Contrepois K, Röst H, Gu Urban GJ, Mishra T, Hanson BM, Bautista EJ, Leopold S, Yeh CY, Spakowicz D, Banerjee I, Chen C, Kukurba K, Perelman D, ... ... Weinstock GM, et al. Integrative Personal Omics Profiles during Periods of Weight Gain and Loss. Cell Systems. PMID 29361466 DOI: 10.1016/J.Cels.2017.12.013 |
0.417 |
|
| 2018 |
Pierce CM, Hong B, Hoehn HJ, Gomez MF, Melas M, McDonnell K, Kim Y, Sodergren E, Weinstock G, Rennert HS, Giordano T, Greenson J, Rennert G, Gruber SB, Schmit SL. Abstract 4746: Microbes in the tumor microenvironment: Bacterial influences on host immunity in colorectal cancer Cancer Research. 78: 4746-4746. DOI: 10.1158/1538-7445.Am2018-4746 |
0.301 |
|
| 2017 |
Jasinska AJ, Zelaya I, Service SK, Peterson CB, Cantor RM, Choi OW, DeYoung J, Eskin E, Fairbanks LA, Fears S, Furterer AE, Huang YS, Ramensky V, Schmitt CA, Svardal H, ... ... Weinstock GM, et al. Genetic variation and gene expression across multiple tissues and developmental stages in a nonhuman primate. Nature Genetics. PMID 29083405 DOI: 10.1038/Ng.3959 |
0.336 |
|
| 2017 |
Svardal H, Jasinska AJ, Apetrei C, Coppola G, Huang Y, Schmitt CA, Jacquelin B, Ramensky V, Müller-Trutwin M, Antonio M, Weinstock G, Grobler JP, Dewar K, Wilson RK, Turner TR, et al. Ancient hybridization and strong adaptation to viruses across African vervet monkey populations. Nature Genetics. PMID 29083404 DOI: 10.1038/Ng.3980 |
0.34 |
|
| 2017 |
Bartley JM, Zhou X, Kuchel GA, Weinstock GM, Haynes L. Impact of Age, Caloric Restriction, and Influenza Infection on Mouse Gut Microbiome: An Exploratory Study of the Role of Age-Related Microbiome Changes on Influenza Responses. Frontiers in Immunology. 8: 1164. PMID 28979265 DOI: 10.3389/Fimmu.2017.01164 |
0.319 |
|
| 2017 |
Petersen LM, Bautista EJ, Nguyen H, Hanson BM, Chen L, Lek SH, Sodergren E, Weinstock GM. Community characteristics of the gut microbiomes of competitive cyclists. Microbiome. 5: 98. PMID 28797298 DOI: 10.1186/S40168-017-0320-4 |
0.399 |
|
| 2017 |
Bowers RM, Kyrpides NC, Stepanauskas R, Harmon-Smith M, Doud D, Reddy TBK, Schulz F, Jarett J, Rivers AR, Eloe-Fadrosh EA, Tringe SG, Ivanova NN, Copeland A, Clum A, Becraft ED, ... ... Weinstock GM, et al. Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea. Nature Biotechnology. 35: 725-731. PMID 28787424 DOI: 10.1038/Nbt.3893 |
0.408 |
|
| 2017 |
Arias CA, Reyes J, Carvajal LP, Rincon S, Diaz L, Panesso D, Ibarra G, Rios R, Munita JM, Salles MJ, Alvarez-Moreno C, Labarca J, Garcia C, Luna CM, Mejia-Villatoro C, ... ... Weinstock GM, et al. Molecular Epidemiology and Phylogenomics of Staphylococcus aureus Bacteremia in Latin-America: A Prospective Cohort Multicenter Study in Nine Countries. Antimicrobial Agents and Chemotherapy. PMID 28760895 DOI: 10.1128/Aac.00816-17 |
0.316 |
|
| 2017 |
Schlaberg R, Chiu CY, Miller S, Procop GW, Weinstock G. Validation of Metagenomic Next-Generation Sequencing Tests for Universal Pathogen Detection. Archives of Pathology & Laboratory Medicine. PMID 28169558 DOI: 10.5858/Arpa.2016-0539-Ra |
0.343 |
|
| 2016 |
Robinson LS, Perry J, Lek S, Wollam A, Sodergren E, Weinstock G, Lewis WG, Lewis AL. Genome Sequences of 15 Gardnerella vaginalis Strains Isolated from the Vaginas of Women with and without Bacterial Vaginosis. Genome Announcements. 4. PMID 27688326 DOI: 10.1128/Genomea.00879-16 |
0.394 |
|
| 2016 |
Senghore M, Bayliss SC, Kwambana-Adams BA, Foster-Nyarko E, Manneh J, Dione M, Badji H, Ebruke C, Doughty EL, Thorpe HA, Jasinska AJ, Schmitt CA, Cramer JD, Turner TR, Weinstock G, et al. Whole-genome sequencing reveals transmission of Staphylococcus aureus from humans to green monkeys in The Gambia. Applied and Environmental Microbiology. PMID 27474712 DOI: 10.1128/Aem.01496-16 |
0.34 |
|
| 2016 |
De Meyer SE, Briscoe L, Martinez-Hidalgo P, Agapakis C, Estrada de Los Santos P, Seshadri R, Reeve W, Weinstock G, O'Hara G, Howieson J, Hirsch AM. Symbiotic Burkholderia species show diverse arrangements of nif/fix and nod genes, and lack typical high affinity cytochrome cbb3 oxidase genes. Molecular Plant-Microbe Interactions : Mpmi. PMID 27269511 DOI: 10.1094/Mpmi-05-16-0091-R |
0.326 |
|
| 2016 |
Hanson B, Zhou Y, Bautista EJ, Urch B, Speck M, Silverman F, Muilenberg M, Phipatanakul W, Weinstock G, Sodergren E, Gold DR, Sordillo JE. Characterization of the bacterial and fungal microbiome in indoor dust and outdoor air samples: a pilot study. Environmental Science. Processes & Impacts. PMID 27213188 DOI: 10.1039/C5Em00639B |
0.318 |
|
| 2016 |
Muir P, Li S, Lou S, Wang D, Spakowicz DJ, Salichos L, Zhang J, Weinstock GM, Isaacs F, Rozowsky J, Gerstein M. The real cost of sequencing: scaling computation to keep pace with data generation. Genome Biology. 17: 53. PMID 27009100 DOI: 10.1186/S13059-016-0917-0 |
0.337 |
|
| 2016 |
Westblade LF, van Belkum A, Grundhoff A, Weinstock GM, Pamer EG, Pallen MJ, Dunne WM. Role of Clinicogenomics in Infectious Disease Diagnostics and Public Health Microbiology. Journal of Clinical Microbiology. PMID 26912755 DOI: 10.1128/Jcm.02664-15 |
0.346 |
|
| 2016 |
Didion JP, Morgan AP, Yadgary L, Bell TA, McMullan RC, Ortiz de Solorzano L, Britton-Davidian J, Bult CJ, Campbell KJ, Castiglia R, Ching YH, Chunco AJ, Crowley JJ, Chesler EJ, Förster DW, ... ... Weinstock GM, et al. R2d2 drives selfish sweeps in the house mouse. Molecular Biology and Evolution. PMID 26882987 DOI: 10.1093/Molbev/Msw036 |
0.326 |
|
| 2016 |
Bray MS, Loos RJ, McCaffery JM, Ling C, Franks PW, Weinstock GM, Snyder MP, Vassy JL, Agurs-Collins T. NIH working group report-using genomic information to guide weight management: From universal to precision treatment. Obesity (Silver Spring, Md.). 24: 14-22. PMID 26692578 DOI: 10.1002/Oby.21381 |
0.453 |
|
| 2016 |
Daiger SP, Sullivan LS, Bowne SJ, Koboldt DC, Blanton SH, Wheaton DK, Avery CE, Cadena ED, Koenekoop RK, Fulton RS, Wilson RK, Weinstock GM, Lewis RA, Birch DG. Identification of a Novel Gene on 10q22.1 Causing Autosomal Dominant Retinitis Pigmentosa (adRP). Advances in Experimental Medicine and Biology. 854: 193-200. PMID 26427411 DOI: 10.1007/978-3-319-17121-0_26 |
0.311 |
|
| 2015 |
Goldberg B, Sichtig H, Geyer C, Ledeboer N, Weinstock GM. Making the Leap from Research Laboratory to Clinic: Challenges and Opportunities for Next-Generation Sequencing in Infectious Disease Diagnostics. Mbio. 6. PMID 26646014 DOI: 10.1128/Mbio.01888-15 |
0.386 |
|
| 2015 |
Zhou Y, Wylie K, Ei Feghaly RE, Mihindukulasuriya K, Elward A, Haslam DB, Storch G, Weinstock GM. Metagenomic approach for identification of the pathogens associated with diarrhea in stool specimens. Journal of Clinical Microbiology. PMID 26637379 DOI: 10.1128/Jcm.01965-15 |
0.35 |
|
| 2015 |
Čejková D, Strouhal M, Norris SJ, Weinstock GM, Šmajs D. A Retrospective Study on Genetic Heterogeneity within Treponema Strains: Subpopulations Are Genetically Distinct in a Limited Number of Positions. Plos Neglected Tropical Diseases. 9: e0004110. PMID 26436423 DOI: 10.1371/Journal.Pntd.0004110 |
0.353 |
|
| 2015 |
Warren WC, Jasinska AJ, Garcia-Perez R, Svardal H, Tomlinson C, Rocchi M, Archidiacono N, Capozzi O, Minx P, Montague MJ, Kyung K, Hillier LW, Kremitzki M, Graves T, Chiang C, ... ... Weinstock GM, et al. The genome of the vervet (Chlorocebus aethiops sabaeus). Genome Research. PMID 26377836 DOI: 10.1101/Gr.192922.115 |
0.401 |
|
| 2015 |
Zhang Y, Rowehl L, Krumsiek JM, Orner EP, Shaikh N, Tarr PI, Sodergren E, Weinstock GM, Boedeker EC, Xiong X, Parkinson J, Frank DN, Li E, Gathungu G. Identification of Candidate Adherent-Invasive E. coli Signature Transcripts by Genomic/Transcriptomic Analysis. Plos One. 10: e0130902. PMID 26125937 DOI: 10.1371/Journal.Pone.0130902 |
0.392 |
|
| 2015 |
Huang YS, Ramensky V, Service SK, Jasinska AJ, Jung Y, Choi OW, Cantor RM, Juretic N, Wasserscheid J, Kaplan JR, Jorgensen MJ, Dyer TD, Dewar K, Blangero J, Wilson RK, ... ... Weinstock GM, et al. Sequencing strategies and characterization of 721 vervet monkey genomes for future genetic analyses of medically relevant traits. Bmc Biology. 13: 41. PMID 26092298 DOI: 10.1186/S12915-015-0152-2 |
0.388 |
|
| 2015 |
Yerrapragada S, Shukla A, Hallsworth-Pepin K, Choi K, Wollam A, Clifton S, Qin X, Muzny D, Raghuraman S, Ashki H, Uzman A, Highlander SK, Fryszczyn BG, Fox GE, Tirumalai MR, ... ... Weinstock GM, et al. Extreme Sensory Complexity Encoded in the 10-Megabase Draft Genome Sequence of the Chromatically Acclimating Cyanobacterium Tolypothrix sp. PCC 7601. Genome Announcements. 3. PMID 25953173 DOI: 10.1128/Genomea.00355-15 |
0.581 |
|
| 2015 |
Leslie EJ, Taub MA, Liu H, Steinberg KM, Koboldt DC, Zhang Q, Carlson JC, Hetmanski JB, Wang H, Larson DE, Fulton RS, Kousa YA, Fakhouri WD, Naji A, Ruczinski I, ... ... Weinstock GM, et al. Identification of functional variants for cleft lip with or without cleft palate in or near PAX7, FGFR2, and NOG by targeted sequencing of GWAS loci. American Journal of Human Genetics. 96: 397-411. PMID 25704602 DOI: 10.1016/J.Ajhg.2015.01.004 |
0.351 |
|
| 2015 |
Didion JP, Morgan AP, Clayshulte AM, Mcmullan RC, Yadgary L, Petkov PM, Bell TA, Gatti DM, Crowley JJ, Hua K, Aylor DL, Bai L, Calaway M, Chesler EJ, French JE, ... ... Weinstock GM, et al. A multi-megabase copy number gain causes maternal transmission ratio distortion on mouse chromosome 2. Plos Genetics. 11: e1004850. PMID 25679959 DOI: 10.1371/Journal.Pgen.1004850 |
0.339 |
|
| 2014 |
Peacock SJ, Weinstock GM. Microbial sequencing to improve individual and population health. Genome Medicine. 6: 103. PMID 25505493 DOI: 10.1186/S13073-014-0103-5 |
0.355 |
|
| 2014 |
Weinstock GM, Peacock SJ. Next-generation pathogen genomics. Genome Biology. 15: 528. PMID 25417942 DOI: 10.1186/S13059-014-0528-6 |
0.451 |
|
| 2014 |
Liu Y, Wu B, Weinstock G, Walker DH, Yu XJ. Inactivation of SAM-methyltransferase is the mechanism of attenuation of a historic louse borne typhus vaccine strain. Plos One. 9: e113285. PMID 25412248 DOI: 10.1371/Journal.Pone.0113285 |
0.351 |
|
| 2014 |
Staudová B, Strouhal M, Zobaníková M, Cejková D, Fulton LL, Chen L, Giacani L, Centurion-Lara A, Bruisten SM, Sodergren E, Weinstock GM, Smajs D. Whole genome sequence of the Treponema pallidum subsp. endemicum strain Bosnia A: the genome is related to yaws treponemes but contains few loci similar to syphilis treponemes. Plos Neglected Tropical Diseases. 8: e3261. PMID 25375929 DOI: 10.1371/Journal.Pntd.0003261 |
0.439 |
|
| 2014 |
Smallwood TL, Gatti DM, Quizon P, Weinstock GM, Jung KC, Zhao L, Hua K, Pomp D, Bennett BJ. High-resolution genetic mapping in the diversity outbred mouse population identifies Apobec1 as a candidate gene for atherosclerosis. G3 (Bethesda, Md.). 4: 2353-63. PMID 25344410 DOI: 10.1534/G3.114.014704 |
0.313 |
|
| 2014 |
Zhou Y, Burnham CA, Hink T, Chen L, Shaikh N, Wollam A, Sodergren E, Weinstock GM, Tarr PI, Dubberke ER. Phenotypic and genotypic analysis of Clostridium difficile isolates: a single-center study. Journal of Clinical Microbiology. 52: 4260-6. PMID 25275005 DOI: 10.1128/Jcm.02115-14 |
0.467 |
|
| 2014 |
Wylie KM, Mihindukulasuriya KA, Zhou Y, Sodergren E, Storch GA, Weinstock GM. Metagenomic analysis of double-stranded DNA viruses in healthy adults. Bmc Biology. 12: 71. PMID 25212266 DOI: 10.1186/S12915-014-0071-7 |
0.317 |
|
| 2014 |
Deng X, Desai PT, den Bakker HC, Mikoleit M, Tolar B, Trees E, Hendriksen RS, Frye JG, Porwollik S, Weimer BC, Wiedmann M, Weinstock GM, Fields PI, McClelland M. Genomic epidemiology of Salmonella enterica serotype Enteritidis based on population structure of prevalent lineages. Emerging Infectious Diseases. 20: 1481-9. PMID 25147968 DOI: 10.3201/Eid2009.131095 |
0.408 |
|
| 2014 |
Kyrpides NC, Hugenholtz P, Eisen JA, Woyke T, Göker M, Parker CT, Amann R, Beck BJ, Chain PS, Chun J, Colwell RR, Danchin A, Dawyndt P, Dedeurwaerdere T, DeLong EF, ... ... Weinstock G, et al. Genomic encyclopedia of bacteria and archaea: sequencing a myriad of type strains. Plos Biology. 12: e1001920. PMID 25093819 DOI: 10.1371/Journal.Pbio.1001920 |
0.444 |
|
| 2014 |
Johnson MD, Bell J, Clarke K, Chandler R, Pathak P, Xia Y, Marshall RL, Weinstock GM, Loman NJ, Winn PJ, Lund PA. Characterization of mutations in the PAS domain of the EvgS sensor kinase selected by laboratory evolution for acid resistance in Escherichia coli. Molecular Microbiology. 93: 911-27. PMID 24995530 DOI: 10.1111/Mmi.12704 |
0.312 |
|
| 2014 |
Somarajan SR, Roh JH, Singh KV, Weinstock GM, Murray BE. CcpA is important for growth and virulence of Enterococcus faecium. Infection and Immunity. 82: 3580-7. PMID 24914215 DOI: 10.1128/Iai.01911-14 |
0.311 |
|
| 2014 |
Diaz L, Tran TT, Munita JM, Miller WR, Rincon S, Carvajal LP, Wollam A, Reyes J, Panesso D, Rojas NL, Shamoo Y, Murray BE, Weinstock GM, Arias CA. Whole-genome analyses of Enterococcus faecium isolates with diverse daptomycin MICs. Antimicrobial Agents and Chemotherapy. 58: 4527-34. PMID 24867964 DOI: 10.1128/Aac.02686-14 |
0.328 |
|
| 2014 |
Rossi F, Diaz L, Wollam A, Panesso D, Zhou Y, Rincon S, Narechania A, Xing G, Di Gioia TS, Doi A, Tran TT, Reyes J, Munita JM, Carvajal LP, Hernandez-Roldan A, ... ... Weinstock GM, et al. Transferable vancomycin resistance in a community-associated MRSA lineage. The New England Journal of Medicine. 370: 1524-31. PMID 24738669 DOI: 10.1056/Nejmoa1303359 |
0.361 |
|
| 2014 |
Richards VP, Palmer SR, Pavinski Bitar PD, Qin X, Weinstock GM, Highlander SK, Town CD, Burne RA, Stanhope MJ. Phylogenomics and the dynamic genome evolution of the genus Streptococcus. Genome Biology and Evolution. 6: 741-53. PMID 24625962 DOI: 10.1093/Gbe/Evu048 |
0.574 |
|
| 2014 |
Koboldt DC, Larson DE, Sullivan LS, Bowne SJ, Steinberg KM, Churchill JD, Buhr AC, Nutter N, Pierce EA, Blanton SH, Weinstock GM, Wilson RK, Daiger SP. Exome-based mapping and variant prioritization for inherited Mendelian disorders. American Journal of Human Genetics. 94: 373-84. PMID 24560519 DOI: 10.1016/J.Ajhg.2014.01.016 |
0.331 |
|
| 2014 |
Benahmed FH, Gopinath GR, Wang H, Jean-Gilles Beaubrun J, Grim C, Cheng CM, McClelland M, Ayers S, Abbott J, Desai P, Frye JG, Weinstock G, Hammack TS, Hanes DE, Rasmussen MA, et al. Whole-Genome Sequencing of Salmonella enterica subsp. enterica Serovar Cubana Strains Isolated from Agricultural Sources. Genome Announcements. 2. PMID 24459266 DOI: 10.1128/Genomea.01184-13 |
0.391 |
|
| 2014 |
Angus AA, Agapakis CM, Fong S, Yerrapragada S, Estrada-de los Santos P, Yang P, Song N, Kano S, Caballero-Mellado J, de Faria SM, Dakora FD, Weinstock G, Hirsch AM. Plant-associated symbiotic Burkholderia species lack hallmark strategies required in mammalian pathogenesis. Plos One. 9: e83779. PMID 24416172 DOI: 10.1371/Journal.Pone.0083779 |
0.306 |
|
| 2014 |
Chen K, Chen L, Fan X, Wallis J, Ding L, Weinstock G. TIGRA: a targeted iterative graph routing assembler for breakpoint assembly. Genome Research. 24: 310-7. PMID 24307552 DOI: 10.1101/Gr.162883.113 |
0.443 |
|
| 2014 |
Twigg *L, Nelson DE, Day RB, Gregory RL, Dong Q, Rong R, Knox K, Crothers K, Sodergren E, Weinstock G. Comparison of Whole and Acellular Bronchoalveolar Lavage to Oral Wash Microbiomes. Should Acellular Bronchoalveolar Lavage Be the Standard? Annals of the American Thoracic Society. 11: S72-S73. DOI: 10.1513/Annalsats.201306-162Mg |
0.308 |
|
| 2013 |
Sunagawa S, Schloissnig S, Arumugam M, Forslund K, Mitreva M, Tap J, Zhu A, Waller A, Mende DR, Kultima JR, Martin J, Kota K, Sunyaev SR, Typas A, Weinstock GM, et al. Individuality and temporal stability of the human gut microbiome. Central Asian Journal of Global Health. 2: 120. PMID 29805877 DOI: 10.5195/Cajgh.2013.120 |
0.351 |
|
| 2013 |
Jasinska AJ, Schmitt CA, Service SK, Cantor RM, Dewar K, Jentsch JD, Kaplan JR, Turner TR, Warren WC, Weinstock GM, Woods RP, Freimer NB. Systems biology of the vervet monkey. Ilar Journal / National Research Council, Institute of Laboratory Animal Resources. 54: 122-43. PMID 24174437 DOI: 10.1093/Ilar/Ilt049 |
0.321 |
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| 2013 |
Pětrošová H, Pospíšilová P, Strouhal M, Čejková D, Zobaníková M, Mikalová L, Sodergren E, Weinstock GM, Šmajs D. Resequencing of Treponema pallidum ssp. pallidum strains Nichols and SS14: correction of sequencing errors resulted in increased separation of syphilis treponeme subclusters. Plos One. 8: e74319. PMID 24058545 DOI: 10.1371/Journal.Pone.0074319 |
0.401 |
|
| 2013 |
Kelly SA, Bell TA, Selitsky SR, Buus RJ, Hua K, Weinstock GM, Garland T, Pardo-Manuel de Villena F, Pomp D. A novel intronic single nucleotide polymorphism in the myosin heavy polypeptide 4 gene is responsible for the mini-muscle phenotype characterized by major reduction in hind-limb muscle mass in mice. Genetics. 195: 1385-95. PMID 24056412 DOI: 10.1534/Genetics.113.154476 |
0.301 |
|
| 2013 |
Turabelidze G, Lawrence SJ, Gao H, Sodergren E, Weinstock GM, Abubucker S, Wylie T, Mitreva M, Shaikh N, Gautom R, Tarr PI. Precise dissection of an Escherichia coli O157:H7 outbreak by single nucleotide polymorphism analysis. Journal of Clinical Microbiology. 51: 3950-4. PMID 24048526 DOI: 10.1128/Jcm.01930-13 |
0.324 |
|
| 2013 |
Lang GI, Rice DP, Hickman MJ, Sodergren E, Weinstock GM, Botstein D, Desai MM. Pervasive genetic hitchhiking and clonal interference in forty evolving yeast populations. Nature. 500: 571-4. PMID 23873039 DOI: 10.1038/Nature12344 |
0.51 |
|
| 2013 |
Tirumalai MR, Rastogi R, Zamani N, O'Bryant Williams E, Allen S, Diouf F, Kwende S, Weinstock GM, Venkateswaran KJ, Fox GE. Candidate genes that may be responsible for the unusual resistances exhibited by Bacillus pumilus SAFR-032 spores. Plos One. 8: e66012. PMID 23799069 DOI: 10.1371/Journal.Pone.0066012 |
0.378 |
|
| 2013 |
Wylie KM, Weinstock GM, Storch GA. Virome genomics: a tool for defining the human virome. Current Opinion in Microbiology. 16: 479-84. PMID 23706900 DOI: 10.1016/J.Mib.2013.04.006 |
0.394 |
|
| 2013 |
Doolittle WF, Fraser P, Gerstein MB, Graveley BR, Henikoff S, Huttenhower C, Oshlack A, Ponting CP, Rinn JL, Schatz MC, Ule J, Weigel D, Weinstock GM. Sixty years of genome biology. Genome Biology. 14: 113. PMID 23651518 DOI: 10.1186/Gb-2013-14-4-113 |
0.37 |
|
| 2013 |
Zobaníková M, Strouhal M, Mikalová L, Cejková D, Ambrožová L, Pospíšilová P, Fulton LL, Chen L, Sodergren E, Weinstock GM, Smajs D. Whole genome sequence of the Treponema Fribourg-Blanc: unspecified simian isolate is highly similar to the yaws subspecies. Plos Neglected Tropical Diseases. 7: e2172. PMID 23638193 DOI: 10.1371/Journal.Pntd.0002172 |
0.423 |
|
| 2013 |
Tomida S, Nguyen L, Chiu BH, Liu J, Sodergren E, Weinstock GM, Li H. Pan-genome and comparative genome analyses of propionibacterium acnes reveal its genomic diversity in the healthy and diseased human skin microbiome. Mbio. 4: e00003-13. PMID 23631911 DOI: 10.1128/Mbio.00003-13 |
0.418 |
|
| 2013 |
Desai PT, Porwollik S, Long F, Cheng P, Wollam A, Bhonagiri-Palsikar V, Hallsworth-Pepin K, Clifton SW, Weinstock GM, McClelland M. Evolutionary Genomics of Salmonella enterica Subspecies. Mbio. 4. PMID 23462113 DOI: 10.1128/Mbio.00579-12 |
0.414 |
|
| 2013 |
Fitz-Gibbon S, Tomida S, Chiu BH, Nguyen L, Du C, Liu M, Elashoff D, Erfe MC, Loncaric A, Kim J, Modlin RL, Miller JF, Sodergren E, Craft N, Weinstock GM, et al. Propionibacterium acnes strain populations in the human skin microbiome associated with acne. The Journal of Investigative Dermatology. 133: 2152-60. PMID 23337890 DOI: 10.1038/Jid.2013.21 |
0.339 |
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| 2013 |
Schloissnig S, Arumugam M, Sunagawa S, Mitreva M, Tap J, Zhu A, Waller A, Mende DR, Kultima JR, Martin J, Kota K, Sunyaev SR, Weinstock GM, Bork P. Genomic variation landscape of the human gut microbiome. Nature. 493: 45-50. PMID 23222524 DOI: 10.1038/Nature11711 |
0.337 |
|
| 2013 |
Tran TT, Panesso D, Gao H, Roh JH, Munita JM, Reyes J, Diaz L, Lobos EA, Shamoo Y, Mishra NN, Bayer AS, Murray BE, Weinstock GM, Arias CA. Whole-genome analysis of a daptomycin-susceptible enterococcus faecium strain and its daptomycin-resistant variant arising during therapy. Antimicrobial Agents and Chemotherapy. 57: 261-8. PMID 23114757 DOI: 10.1128/Aac.01454-12 |
0.358 |
|
| 2013 |
Cejková D, Zobaníková M, Pospísilová P, Strouhal M, Mikalová L, Weinstock GM, Smajs D. Structure of rrn operons in pathogenic non-cultivable treponemes: sequence but not genomic position of intergenic spacers correlates with classification of Treponema pallidum and Treponema paraluiscuniculi strains. Journal of Medical Microbiology. 62: 196-207. PMID 23082031 DOI: 10.1099/Jmm.0.050658-0 |
0.35 |
|
| 2013 |
Wendl MC, Kota K, Weinstock GM, Mitreva M. Coverage theories for metagenomic DNA sequencing based on a generalization of Stevens' theorem. Journal of Mathematical Biology. 67: 1141-61. PMID 22965653 DOI: 10.1007/S00285-012-0586-X |
0.318 |
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| 2013 |
Staudova B, Strouhal M, Zobanikova M, Cejkova D, Giacani L, Centurion-Lara A, Fulton LL, Chen L, Weinstock GM, Smajs D. P1.011 Whole Genome Sequence of the Treponema Pallidum Ssp. Endemicum, Strain Bosnia A Sexually Transmitted Infections. 89: A77.1-A77. DOI: 10.1136/Sextrans-2013-051184.0232 |
0.445 |
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| 2013 |
Strouhal M, Zobanikova M, Cejkova D, Petrosova H, Pospisilova P, Staudova B, Weinstock GM, Smajs D. P1.009 Analysis of Simple Sequence Repeats in the Genomes of Pathogenic Treponemal Strains Sexually Transmitted Infections. 89: A76.2-A76. DOI: 10.1136/Sextrans-2013-051184.0230 |
0.388 |
|
| 2013 |
Angus AA, Lee A, Lum MR, Shehayeb M, Hessabi R, Fujishige NA, Yerrapragada S, Kano S, Song N, Yang P, Estrada de los Santos P, de Faria SM, Dakora FD, Weinstock G, Hirsch AM. Nodulation and effective nitrogen fixation of Macroptilium atropurpureum (siratro) by Burkholderia tuberum, a nodulating and plant growth promoting beta-proteobacterium, are influenced by environmental factors Plant and Soil. 369: 543-562. DOI: 10.1007/S11104-013-1590-7 |
0.304 |
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| 2012 |
Zobaníková M, Mikolka P, Cejková D, Pospíšilová P, Chen L, Strouhal M, Qin X, Weinstock GM, Smajs D. Complete genome sequence of Treponema pallidum strain DAL-1. Standards in Genomic Sciences. 7: 12-21. PMID 23449808 DOI: 10.4056/Sigs.2615838 |
0.603 |
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| 2012 |
Kontur WS, Schackwitz WS, Ivanova N, Martin J, Labutti K, Deshpande S, Tice HN, Pennacchio C, Sodergren E, Weinstock GM, Noguera DR, Donohue TJ. Revised sequence and annotation of the Rhodobacter sphaeroides 2.4.1 genome. Journal of Bacteriology. 194: 7016-7. PMID 23209255 DOI: 10.1128/Jb.01214-12 |
0.422 |
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| 2012 |
Williams TM, Loman NJ, Ebruke C, Musher DM, Adegbola RA, Pallen MJ, Weinstock GM, Antonio M. Genome analysis of a highly virulent serotype 1 strain of Streptococcus pneumoniae from West Africa. Plos One. 7: e26742. PMID 23082106 DOI: 10.1371/Journal.Pone.0026742 |
0.402 |
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| 2012 |
Pětrošová H, Zobaníková M, Čejková D, Mikalová L, Pospíšilová P, Strouhal M, Chen L, Qin X, Muzny DM, Weinstock GM, Šmajs D. Whole genome sequence of Treponema pallidum ssp. pallidum, strain Mexico A, suggests recombination between yaws and syphilis strains. Plos Neglected Tropical Diseases. 6: e1832. PMID 23029591 DOI: 10.1371/Journal.Pntd.0001832 |
0.56 |
|
| 2012 |
Weinstock GM. Genomic approaches to studying the human microbiota. Nature. 489: 250-6. PMID 22972298 DOI: 10.1038/Nature11553 |
0.334 |
|
| 2012 |
Qin X, Galloway-Peña JR, Sillanpaa J, Roh JH, Nallapareddy SR, Chowdhury S, Bourgogne A, Choudhury T, Muzny DM, Buhay CJ, Ding Y, Dugan-Rocha S, Liu W, Kovar C, Sodergren E, ... ... Weinstock GM, et al. Complete genome sequence of Enterococcus faecium strain TX16 and comparative genomic analysis of Enterococcus faecium genomes. Bmc Microbiology. 12: 135. PMID 22769602 DOI: 10.1186/1471-2180-12-135 |
0.562 |
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| 2012 |
Ward DV, Gevers D, Giannoukos G, Earl AM, Methé BA, Sodergren E, Feldgarden M, Ciulla DM, Tabbaa D, Arze C, Appelbaum E, Aird L, Anderson S, Ayvaz T, Belter E, ... ... Weinstock G, et al. Evaluation of 16s rDNA-based community profiling for human microbiome research Plos One. 7. PMID 22720093 DOI: 10.1371/Journal.Pone.0039315 |
0.514 |
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| 2012 |
Martin J, Sykes S, Young S, Kota K, Sanka R, Sheth N, Orvis J, Sodergren E, Wang Z, Weinstock GM, Mitreva M. Optimizing read mapping to reference genomes to determine composition and species prevalence in microbial communities. Plos One. 7: e36427. PMID 22719831 DOI: 10.1371/Journal.Pone.0036427 |
0.382 |
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| 2012 |
Wylie KM, Truty RM, Sharpton TJ, Mihindukulasuriya KA, Zhou Y, Gao H, Sodergren E, Weinstock GM, Pollard KS. Novel bacterial taxa in the human microbiome. Plos One. 7: e35294. PMID 22719826 DOI: 10.1371/Journal.Pone.0035294 |
0.379 |
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| 2012 |
Zhang T, DeSimone RA, Jiao X, Rohlf FJ, Zhu W, Gong QQ, Hunt SR, Dassopoulos T, Newberry RD, Sodergren E, Weinstock G, Robertson CE, Frank DN, Li E. Host genes related to paneth cells and xenobiotic metabolism are associated with shifts in human ileum-associated microbial composition. Plos One. 7: e30044. PMID 22719822 DOI: 10.1371/Journal.Pone.0030044 |
0.344 |
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| 2012 |
Li E, Hamm CM, Gulati AS, Sartor RB, Chen H, Wu X, Zhang T, Rohlf FJ, Zhu W, Gu C, Robertson CE, Pace NR, Boedeker EC, Harpaz N, Yuan J, ... Weinstock GM, et al. Inflammatory bowel diseases phenotype, C. difficile and NOD2 genotype are associated with shifts in human ileum associated microbial composition. Plos One. 7: e26284. PMID 22719818 DOI: 10.1371/Journal.Pone.0026284 |
0.325 |
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| 2012 |
Jasinska AJ, Lin MK, Service S, Choi OW, DeYoung J, Grujic O, Kong SY, Jung Y, Jorgensen MJ, Fairbanks LA, Turner T, Cantor RM, Wasserscheid J, Dewar K, Warren W, ... ... Weinstock G, et al. A non-human primate system for large-scale genetic studies of complex traits. Human Molecular Genetics. 21: 3307-16. PMID 22556363 DOI: 10.1093/Hmg/Dds160 |
0.315 |
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| 2012 |
Cejková D, Zobaníková M, Chen L, Pospíšilová P, Strouhal M, Qin X, Mikalová L, Norris SJ, Muzny DM, Gibbs RA, Fulton LL, Sodergren E, Weinstock GM, Smajs D. Whole genome sequences of three Treponema pallidum ssp. pertenue strains: yaws and syphilis treponemes differ in less than 0.2% of the genome sequence. Plos Neglected Tropical Diseases. 6: e1471. PMID 22292095 DOI: 10.1371/Journal.Pntd.0001471 |
0.603 |
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| 2012 |
Smajs D, Norris SJ, Weinstock GM. Genetic diversity in Treponema pallidum: implications for pathogenesis, evolution and molecular diagnostics of syphilis and yaws. Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. 12: 191-202. PMID 22198325 DOI: 10.1016/J.Meegid.2011.12.001 |
0.394 |
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| 2012 |
Yao G, Ye L, Gao H, Minx P, Warren WC, Weinstock GM. Graph accordance of next-generation sequence assemblies. Bioinformatics (Oxford, England). 28: 13-6. PMID 22025481 DOI: 10.1093/Bioinformatics/Btr588 |
0.31 |
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| 2012 |
Monier A, Welsh RM, Gentemann C, Weinstock G, Sodergren E, Armbrust EV, Eisen JA, Worden AZ. Phosphate transporters in marine phytoplankton and their viruses: cross-domain commonalities in viral-host gene exchanges. Environmental Microbiology. 14: 162-76. PMID 21914098 DOI: 10.1111/J.1462-2920.2011.02576.X |
0.4 |
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| 2011 |
Lindblad-Toh K, Garber M, Zuk O, Lin MF, Parker BJ, Washietl S, Kheradpour P, Ernst J, Jordan G, Mauceli E, Ward LD, Lowe CB, Holloway AK, Clamp M, Gnerre S, ... ... Weinstock GM, et al. A high-resolution map of human evolutionary constraint using 29 mammals. Nature. 478: 476-82. PMID 21993624 DOI: 10.1038/Nature10530 |
0.388 |
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| 2011 |
Arias CA, Panesso D, McGrath DM, Qin X, Mojica MF, Miller C, Diaz L, Tran TT, Rincon S, Barbu EM, Reyes J, Roh JH, Lobos E, Sodergren E, Pasqualini R, ... ... Weinstock GM, et al. Genetic basis for in vivo daptomycin resistance in enterococci. The New England Journal of Medicine. 365: 892-900. PMID 21899450 DOI: 10.1056/Nejmoa1011138 |
0.456 |
|
| 2011 |
Renfree MB, Papenfuss AT, Deakin JE, Lindsay J, Heider T, Belov K, Rens W, Waters PD, Pharo EA, Shaw G, Wong ES, Lefèvre CM, Nicholas KR, Kuroki Y, Wakefield MJ, ... ... Weinstock G, et al. Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development. Genome Biology. 12: R81. PMID 21854559 DOI: 10.1186/Gb-2011-12-8-R81 |
0.47 |
|
| 2011 |
Šmajs D, Zobaníková M, Strouhal M, Čejková D, Dugan-Rocha S, Pospíšilová P, Norris SJ, Albert T, Qin X, Hallsworth-Pepin K, Buhay C, Muzny DM, Chen L, Gibbs RA, Weinstock GM. Complete genome sequence of Treponema paraluiscuniculi, strain Cuniculi A: the loss of infectivity to humans is associated with genome decay. Plos One. 6: e20415. PMID 21655244 DOI: 10.1371/Journal.Pone.0020415 |
0.632 |
|
| 2011 |
Bowne SJ, Humphries MM, Sullivan LS, Kenna PF, Tam LC, Kiang AS, Campbell M, Weinstock GM, Koboldt DC, Ding L, Fulton RS, Sodergren EJ, Allman D, Millington-Ward S, Palfi A, et al. A dominant mutation in RPE65 identified by whole-exome sequencing causes retinitis pigmentosa with choroidal involvement. European Journal of Human Genetics : Ejhg. 19: 1074-81. PMID 21654732 DOI: 10.1038/Ejhg.2011.86 |
0.351 |
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| 2011 |
Yilmaz P, Kottmann R, Field D, Knight R, Cole JR, Amaral-Zettler L, Gilbert JA, Karsch-Mizrachi I, Johnston A, Cochrane G, Vaughan R, Hunter C, Park J, Morrison N, Rocca-Serra P, ... ... Weinstock GM, et al. Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications. Nature Biotechnology. 29: 415-20. PMID 21552244 DOI: 10.1038/Nbt.1823 |
0.412 |
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| 2011 |
Nallapareddy SR, Sillanpää J, Mitchell J, Singh KV, Chowdhury SA, Weinstock GM, Sullam PM, Murray BE. Conservation of Ebp-type pilus genes among Enterococci and demonstration of their role in adherence of Enterococcus faecalis to human platelets. Infection and Immunity. 79: 2911-20. PMID 21502588 DOI: 10.1128/Iai.00039-11 |
0.346 |
|
| 2011 |
Ye L, Hillier LW, Minx P, Thane N, Locke DP, Martin JC, Chen L, Mitreva M, Miller JR, Haub KV, Dooling DJ, Mardis ER, Wilson RK, Weinstock GM, Warren WC. A vertebrate case study of the quality of assemblies derived from next-generation sequences. Genome Biology. 12: R31. PMID 21453517 DOI: 10.1186/Gb-2011-12-3-R31 |
0.431 |
|
| 2011 |
Suen G, Teiling C, Li L, Holt C, Abouheif E, Bornberg-Bauer E, Bouffard P, Caldera EJ, Cash E, Cavanaugh A, Denas O, Elhaik E, Favé MJ, Gadau J, Gibson JD, ... ... Weinstock GM, et al. The genome sequence of the leaf-cutter ant Atta cephalotes reveals insights into its obligate symbiotic lifestyle. Plos Genetics. 7: e1002007. PMID 21347285 DOI: 10.1371/Journal.Pgen.1002007 |
0.436 |
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| 2011 |
Locke DP, Hillier LW, Warren WC, Worley KC, Nazareth LV, Muzny DM, Yang SP, Wang Z, Chinwalla AT, Minx P, Mitreva M, Cook L, Delehaunty KD, Fronick C, Schmidt H, ... ... Weinstock GM, et al. Comparative and demographic analysis of orang-utan genomes. Nature. 469: 529-33. PMID 21270892 DOI: 10.1038/Nature09687 |
0.409 |
|
| 2011 |
Bowne SJ, Sullivan LS, Koboldt DC, Ding L, Fulton R, Abbott RM, Sodergren EJ, Birch DG, Wheaton DH, Heckenlively JR, Liu Q, Pierce EA, Weinstock GM, Daiger SP. Identification of disease-causing mutations in autosomal dominant retinitis pigmentosa (adRP) using next-generation DNA sequencing. Investigative Ophthalmology & Visual Science. 52: 494-503. PMID 20861475 DOI: 10.1167/Iovs.10-6180 |
0.306 |
|
| 2011 |
Renfree MB, Papenfuss AT, Deakin JE, Lindsay J, Heider T, Belov K, Rens W, Waters PD, Pharo EA, Shaw G, Wong ESW, Lefèvre CM, Nicholas KR, Kuroki Y, Wakefield MJ, ... ... Weinstock G, et al. Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development Genome Biology. 12. DOI: 10.1186/Gb-2011-12-12-414 |
0.411 |
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| 2010 |
Mikalová L, Strouhal M, Čejková D, Zobaníková M, Pospíšilová P, Norris SJ, Sodergren E, Weinstock GM, Šmajs D. Genome analysis of Treponema pallidum subsp. pallidum and subsp. pertenue strains: most of the genetic differences are localized in six regions. Plos One. 5: e15713. PMID 21209953 DOI: 10.1371/Journal.Pone.0015713 |
0.397 |
|
| 2010 |
Dougan G, Weinstock GM. A new era in the genomics of bacteria. Current Opinion in Microbiology. 13: 616-8. PMID 20846901 DOI: 10.1016/J.Mib.2010.08.008 |
0.372 |
|
| 2010 |
Marri PR, Paniscus M, Weyand NJ, Rendón MA, Calton CM, Hernández DR, Higashi DL, Sodergren E, Weinstock GM, Rounsley SD, So M. Genome sequencing reveals widespread virulence gene exchange among human Neisseria species. Plos One. 5: e11835. PMID 20676376 DOI: 10.1371/Journal.Pone.0011835 |
0.439 |
|
| 2010 |
Nelson KE, Weinstock GM, Highlander SK, Worley KC, Creasy HH, Wortman JR, Rusch DB, Mitreva M, Sodergren E, Chinwalla AT, Feldgarden M, Gevers D, Haas BJ, Madupu R, et al. A catalog of reference genomes from the human microbiome. Science (New York, N.Y.). 328: 994-9. PMID 20489017 DOI: 10.1126/Science.1183605 |
0.633 |
|
| 2010 |
Ding L, Ellis MJ, Li S, Larson DE, Chen K, Wallis JW, Harris CC, McLellan MD, Fulton RS, Fulton LL, Abbott RM, Hoog J, Dooling DJ, Koboldt DC, Schmidt H, ... ... Weinstock GM, et al. Genome remodelling in a basal-like breast cancer metastasis and xenograft. Nature. 464: 999-1005. PMID 20393555 DOI: 10.1038/Nature08989 |
0.365 |
|
| 2010 |
Lewis T, Loman NJ, Bingle L, Jumaa P, Weinstock GM, Mortiboy D, Pallen MJ. High-throughput whole-genome sequencing to dissect the epidemiology of Acinetobacter baumannii isolates from a hospital outbreak. The Journal of Hospital Infection. 75: 37-41. PMID 20299126 DOI: 10.1016/J.Jhin.2010.01.012 |
0.363 |
|
| 2010 |
Daiger SP, Sullivan LS, Bowne SJ, Birch DG, Heckenlively JR, Pierce EA, Weinstock GM. Targeted high-throughput DNA sequencing for gene discovery in retinitis pigmentosa. Advances in Experimental Medicine and Biology. 664: 325-31. PMID 20238032 DOI: 10.1007/978-1-4419-1399-9_37 |
0.363 |
|
| 2010 |
Snyder LA, Loman NJ, Linton JD, Langdon RR, Weinstock GM, Wren BW, Pallen MJ. Simple sequence repeats in Helicobacter canadensis and their role in phase variable expression and C-terminal sequence switching. Bmc Genomics. 11: 67. PMID 20105305 DOI: 10.1186/1471-2164-11-67 |
0.39 |
|
| 2010 |
Shen Y, Wan Z, Coarfa C, Drabek R, Chen L, Ostrowski EA, Liu Y, Weinstock GM, Wheeler DA, Gibbs RA, Yu F. A SNP discovery method to assess variant allele probability from next-generation resequencing data. Genome Research. 20: 273-80. PMID 20019143 DOI: 10.1101/Gr.096388.109 |
0.38 |
|
| 2010 |
Yilmaz P, Kottmann R, Field D, Knight R, Cole JR, Amaral-Zettler L, Gilbert JA, Karsch-Mizrachi I, Johnston A, Cochrane G, Vaughan R, Hunter C, Park J, Morrison N, Rocca-Serra P, ... ... Weinstock GM, et al. The “Minimum Information about an ENvironmental Sequence” (MIENS) specification Nature Precedings. 5: 1-1. DOI: 10.1038/Npre.2010.5252.1 |
0.374 |
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| 2009 |
Chain PS, Grafham DV, Fulton RS, Fitzgerald MG, Hostetler J, Muzny D, Ali J, Birren B, Bruce DC, Buhay C, Cole JR, Ding Y, Dugan S, Field D, Garrity GM, ... ... Weinstock G, et al. Genomics. Genome project standards in a new era of sequencing. Science (New York, N.Y.). 326: 236-7. PMID 19815760 DOI: 10.1126/Science.1180614 |
0.582 |
|
| 2009 |
Sillanpää J, Nallapareddy SR, Qin X, Singh KV, Muzny DM, Kovar CL, Nazareth LV, Gibbs RA, Ferraro MJ, Steckelberg JM, Weinstock GM, Murray BE. A collagen-binding adhesin, Acb, and ten other putative MSCRAMM and pilus family proteins of Streptococcus gallolyticus subsp. gallolyticus (Streptococcus bovis Group, biotype I). Journal of Bacteriology. 191: 6643-53. PMID 19717590 DOI: 10.1128/Jb.00909-09 |
0.577 |
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| 2009 |
Loman NJ, Snyder LAS, Linton JD, Langdon R, Lawson AJ, Weinstock GM, Wren BW, Pallen MJ. Genome sequence of the emerging pathogen Helicobacter canadensis Journal of Bacteriology. 191: 5566-5567. PMID 19542273 DOI: 10.1128/Jb.00729-09 |
0.432 |
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| 2009 |
Koboldt DC, Chen K, Wylie T, Larson DE, McLellan MD, Mardis ER, Weinstock GM, Wilson RK, Ding L. VarScan: variant detection in massively parallel sequencing of individual and pooled samples. Bioinformatics (Oxford, England). 25: 2283-5. PMID 19542151 DOI: 10.1093/Bioinformatics/Btp373 |
0.366 |
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| 2009 |
Matejková P, Flasarová M, Zákoucká H, Borek M, Kremenová S, Arenberger P, Woznicová V, Weinstock GM, Smajs D. Macrolide treatment failure in a case of secondary syphilis: a novel A2059G mutation in the 23S rRNA gene of Treponema pallidum subsp. pallidum. Journal of Medical Microbiology. 58: 832-6. PMID 19429763 DOI: 10.1099/Jmm.0.007542-0 |
0.324 |
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| 2009 |
Liu Y, Qin X, Song XZH, Jiang H, Shen Y, Durbin KJ, Lien S, Kent MP, Sodeland M, Ren Y, Zhang L, Sodergren E, Havlak P, Worley KC, Weinstock GM, et al. Bos taurus genome assembly Bmc Genomics. 10. PMID 19393050 DOI: 10.1186/1471-2164-10-180 |
0.543 |
|
| 2009 |
Gibbs RA, Taylor JF, Van Tassell CP, Barendse W, Eversole KA, Gill CA, Green RD, Hamernik DL, Kappes SM, Lien S, Matukumalli LK, McEwan JC, Nazareth LV, Schnabel RD, ... Weinstock GM, et al. Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds. Science (New York, N.Y.). 324: 528-32. PMID 19390050 DOI: 10.1126/Science.1167936 |
0.553 |
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| 2009 |
Elsik CG, Tellam RL, Worley KC, Gibbs RA, Muzny DM, Weinstock GM, Adelson DL, Eichler EE, Elnitski L, Guigó R, Hamernik DL, Kappes SM, Lewin HA, Lynn DJ, et al. The genome sequence of taurine cattle: a window to ruminant biology and evolution. Science (New York, N.Y.). 324: 522-8. PMID 19390049 DOI: 10.1126/Science.1169588 |
0.606 |
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| 2008 |
Ding L, Getz G, Wheeler DA, Mardis ER, McLellan MD, Cibulskis K, Sougnez C, Greulich H, Muzny DM, Morgan MB, Fulton L, Fulton RS, Zhang Q, Wendl MC, Lawrence MS, ... ... Weinstock GM, et al. Somatic mutations affect key pathways in lung adenocarcinoma. Nature. 455: 1069-75. PMID 18948947 DOI: 10.1038/Nature07423 |
0.309 |
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| 2008 |
Sillanpää J, Nallapareddy SR, Prakash VP, Qin X, Höök M, Weinstock GM, Murray BE. Identification and phenotypic characterization of a second collagen adhesin, Scm, and genome-based identification and analysis of 13 other predicted MSCRAMMs, including four distinct pilus loci, in Enterococcus faecium. Microbiology (Reading, England). 154: 3199-211. PMID 18832325 DOI: 10.1099/Mic.0.2008/017319-0 |
0.564 |
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| 2008 |
McLendon R, Friedman A, Bigner D, Van Meir EG, Brat DJ, Mastrogianakis GM, Olson JJ, Mikkelsen T, Lehman N, Aldape K, Yung WKA, Bogler O, Weinstein JN, VandenBerg S, Berger M, ... ... Weinstock GM, et al. Comprehensive genomic characterization defines human glioblastoma genes and core pathways Nature. 455: 1061-1068. PMID 18772890 DOI: 10.1038/Nature07385 |
0.352 |
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| 2008 |
Gao H, Pattison D, Yan T, Klingeman DM, Wang X, Petrosino J, Hemphill L, Wan X, Leaphart AB, Weinstock GM, Palzkill T, Zhou J. Generation and validation of a Shewanella oneidensis MR-1 clone set for protein expression and phage display. Plos One. 3: e2983. PMID 18714347 DOI: 10.1371/Journal.Pone.0002983 |
0.36 |
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| 2008 |
Bourgogne A, Garsin DA, Qin X, Singh KV, Sillanpaa J, Yerrapragada S, Ding Y, Dugan-Rocha S, Buhay C, Shen H, Chen G, Williams G, Muzny D, Maadani A, Fox KA, ... ... Weinstock GM, et al. Large scale variation in Enterococcus faecalis illustrated by the genome analysis of strain OG1RF. Genome Biology. 9: R110. PMID 18611278 DOI: 10.1186/Gb-2008-9-7-R110 |
0.593 |
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| 2008 |
Matejková P, Strouhal M, Smajs D, Norris SJ, Palzkill T, Petrosino JF, Sodergren E, Norton JE, Singh J, Richmond TA, Molla MN, Albert TJ, Weinstock GM. Complete genome sequence of Treponema pallidum ssp. pallidum strain SS14 determined with oligonucleotide arrays. Bmc Microbiology. 8: 76. PMID 18482458 DOI: 10.1186/1471-2180-8-76 |
0.401 |
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| 2008 |
Twigger SN, Pruitt KD, Fernández-Suárez XM, Karolchik D, Worley KC, Maglott DR, Brown G, Weinstock G, Gibbs RA, Kent J, Birney E, Jacob HJ. What everybody should know about the rat genome and its online resources. Nature Genetics. 40: 523-7. PMID 18443589 DOI: 10.1038/Ng0508-523 |
0.362 |
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| 2008 |
Wheeler DA, Srinivasan M, Egholm M, Shen Y, Chen L, McGuire A, He W, Chen YJ, Makhijani V, Roth GT, Gomes X, Tartaro K, Niazi F, Turcotte CL, Irzyk GP, ... ... Weinstock GM, et al. The complete genome of an individual by massively parallel DNA sequencing. Nature. 452: 872-6. PMID 18421352 DOI: 10.1038/Nature06884 |
0.628 |
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| 2008 |
Richards S, Gibbs RA, Weinstock GM, Brown SJ, Denell R, Beeman RW, Gibbs R, Beeman RW, Brown SJ, Bucher G, Friedrich M, Grimmelikhuijzen CJ, Klingler M, Lorenzen M, ... ... Weinstock GM, ... ... Weinstock G, ... ... Weinstock G, et al. The genome of the model beetle and pest Tribolium castaneum. Nature. 452: 949-55. PMID 18362917 DOI: 10.1038/Nature06784 |
0.37 |
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| 2008 |
Park Y, Aikins J, Wang LJ, Beeman RW, Oppert B, Lord JC, Brown SJ, Lorenzen MD, Richards S, Weinstock GM, Gibbs RA. Analysis of transcriptome data in the red flour beetle, Tribolium castaneum. Insect Biochemistry and Molecular Biology. 38: 380-6. PMID 18342244 DOI: 10.1016/J.Ibmb.2007.09.008 |
0.421 |
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| 2008 |
Durfee T, Nelson R, Baldwin S, Plunkett G, Burland V, Mau B, Petrosino JF, Qin X, Muzny DM, Ayele M, Gibbs RA, Csörgo B, Pósfai G, Weinstock GM, Blattner FR. The complete genome sequence of Escherichia coli DH10B: Insights into the biology of a laboratory workhorse Journal of Bacteriology. 190: 2597-2606. PMID 18245285 DOI: 10.1128/Jb.01695-07 |
0.613 |
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| 2008 |
Worley KC, Weinstock GM, Gibbs RA. Rats in the genomic era Physiological Genomics. 32: 273-282. PMID 18029439 DOI: 10.1152/Physiolgenomics.00208.2007 |
0.363 |
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| 2007 |
Zhang ZD, Cayting P, Weinstock G, Gerstein M. Analysis of nuclear receptor pseudogenes in vertebrates: how the silent tell their stories. Molecular Biology and Evolution. 25: 131-43. PMID 18065488 DOI: 10.1093/Molbev/Msm251 |
0.406 |
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| 2007 |
Aronstein KA, Murray KD, de León JH, Qin X, Weinstock GM. High mobility group (HMG-box) genes in the honeybee fungal pathogen Ascosphaera apis. Mycologia. 99: 553-61. PMID 18065006 DOI: 10.3852/Mycologia.99.4.553 |
0.546 |
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| 2007 |
Highlander SK, Hultén KG, Qin X, Jiang H, Yerrapragada S, Mason EO, Shang Y, Williams TM, Fortunov RM, Liu Y, Igboeli O, Petrosino J, Tirumalai M, Uzman A, Fox GE, ... ... Weinstock GM, et al. Subtle genetic changes enhance virulence of methicillin resistant and sensitive Staphylococcus aureus. Bmc Microbiology. 7: 99. PMID 17986343 DOI: 10.1186/1471-2180-7-99 |
0.479 |
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| 2007 |
Miller W, Rosenbloom K, Hardison RC, Hou M, Taylor J, Raney B, Burhans R, King DC, Baertsch R, Blankenberg D, Kosakovsky Pond SL, Nekrutenko A, Giardine B, Harris RS, Tyekucheva S, ... ... Weinstock GM, et al. 28-way vertebrate alignment and conservation track in the UCSC Genome Browser. Genome Research. 17: 1797-808. PMID 17984227 DOI: 10.1101/Gr.6761107 |
0.414 |
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| 2007 |
Weir BA, Woo MS, Getz G, Perner S, Ding L, Beroukhim R, Lin WM, Province MA, Kraja A, Johnson LA, Shah K, Sato M, Thomas RK, Barletta JA, Borecki IB, ... ... Weinstock GM, et al. Characterizing the cancer genome in lung adenocarcinoma. Nature. 450: 893-8. PMID 17982442 DOI: 10.1038/Nature06358 |
0.343 |
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| 2007 |
Sabeti PC, Varilly P, Fry B, Lohmueller J, Hostetter E, Cotsapas C, Xie X, Byrne EH, McCarroll SA, Gaudet R, Schaffner SF, Lander ES, Frazer KA, Ballinger DG, ... ... Weinstock GM, et al. Genome-wide detection and characterization of positive selection in human populations. Nature. 449: 913-8. PMID 17943131 DOI: 10.1038/Nature06250 |
0.32 |
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| 2007 |
Albert TJ, Molla MN, Muzny DM, Nazareth L, Wheeler D, Song X, Richmond TA, Middle CM, Rodesch MJ, Packard CJ, Weinstock GM, Gibbs RA. Direct selection of human genomic loci by microarray hybridization. Nature Methods. 4: 903-5. PMID 17934467 DOI: 10.1038/Nmeth1111 |
0.413 |
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| 2007 |
Gioia J, Yerrapragada S, Qin X, Jiang H, Igboeli OC, Muzny D, Dugan-Rocha S, Ding Y, Hawes A, Liu W, Perez L, Kovar C, Dinh H, Lee S, Nazareth L, ... ... Weinstock GM, et al. Paradoxical DNA repair and peroxide resistance gene conservation in Bacillus pumilus SAFR-032. Plos One. 2: e928. PMID 17895969 DOI: 10.1371/Journal.Pone.0000928 |
0.479 |
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| 2007 |
Strouhal M, Smajs D, Matejková P, Sodergren E, Amin AG, Howell JK, Norris SJ, Weinstock GM. Genome differences between Treponema pallidum subsp. pallidum strain Nichols and T. paraluiscuniculi strain Cuniculi A. Infection and Immunity. 75: 5859-66. PMID 17893135 DOI: 10.1128/Iai.00709-07 |
0.47 |
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| 2007 |
Karpathy SE, Qin X, Gioia J, Jiang H, Liu Y, Petrosino JF, Yerrapragada S, Fox GE, Haake SK, Weinstock GM, Highlander SK. Genome sequence of Fusobacterium nucleatum subspecies polymorphum - a genetically tractable fusobacterium. Plos One. 2: e659. PMID 17668047 DOI: 10.1371/Journal.Pone.0000659 |
0.759 |
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| 2007 |
Birney E, Stamatoyannopoulos JA, Dutta A, Guigó R, Gingeras TR, Margulies EH, Weng Z, Snyder M, Dermitzakis ET, Thurman RE, Kuehn MS, Taylor CM, Neph S, Koch CM, ... ... Weinstock GM, et al. Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project. Nature. 447: 799-816. PMID 17571346 DOI: 10.1038/Nature05874 |
0.518 |
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| 2007 |
Margulies EH, Cooper GM, Asimenos G, Thomas DJ, Dewey CN, Siepel A, Birney E, Keefe D, Schwartz AS, Hou M, Taylor J, Nikolaev S, Montoya-Burgos JI, Löytynoja A, Whelan S, ... ... Weinstock GM, et al. Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome. Genome Research. 17: 760-74. PMID 17567995 DOI: 10.1101/Gr.6034307 |
0.404 |
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| 2007 |
Weinstock GM. ENCODE: More genomic empowerment Genome Research. 17: 667-668. PMID 17567987 DOI: 10.1101/Gr.6534207 |
0.374 |
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| 2007 |
Gibbs RA, Rogers J, Katze MG, Bumgarner R, Weinstock GM, Mardis ER, Remington KA, Strausberg RL, Venter JC, Wilson RK, Batzer MA, Bustamante CD, Eichler EE, Hahn MW, et al. Evolutionary and biomedical insights from the rhesus macaque genome. Science (New York, N.Y.). 316: 222-34. PMID 17431167 DOI: 10.1126/Science.1139247 |
0.579 |
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| 2007 |
Solignac M, Zhang L, Mougel F, Li B, Vautrin D, Monnerot M, Cornuet JM, Worley KC, Weinstock GM, Gibbs RA. The genome of Apis mellifera: Dialog between linkage mapping and sequence assembly Genome Biology. 8. PMID 17381825 DOI: 10.1186/Gb-2007-8-3-403 |
0.374 |
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| 2006 |
Sodergren E, Shen Y, Song X, Zhang L, Gibbs RA, Weinstock GM. Shedding genomic light on Aristotle's lantern Developmental Biology. 300: 2-8. PMID 17097628 DOI: 10.1016/J.Ydbio.2006.10.005 |
0.436 |
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| 2006 |
Sodergren E, Weinstock GM, Davidson EH, Cameron RA, Gibbs RA, Angerer RC, Angerer LM, Arnone MI, Burgess DR, Burke RD, Coffman JA, Dean M, Elphick MR, Ettensohn CA, et al. The genome of the sea urchin Strongylocentrotus purpuratus. Science (New York, N.Y.). 314: 941-52. PMID 17095691 DOI: 10.1126/Science.1133609 |
0.437 |
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| 2006 |
Qin X, Evans JD, Aronstein KA, Murray KD, Weinstock GM. Genome sequences of the honey bee pathogens Paenibacillus larvae and Ascosphaera apis. Insect Molecular Biology. 15: 715-8. PMID 17069642 DOI: 10.1111/J.1365-2583.2006.00694.X |
0.587 |
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| 2006 |
Robinson GE, Evans JD, Maleszka R, Robertson HM, Weaver DB, Worley K, Gibbs RA, Weinstock GM. Sweetness and light: illuminating the honey bee genome. Insect Molecular Biology. 15: 535-9. PMID 17069628 DOI: 10.1111/J.1365-2583.2006.00698.X |
0.43 |
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| 2006 |
Savard J, Tautz D, Richards S, Weinstock GM, Gibbs RA, Werren JH, Tettelin H, Lercher MJ. Phylogenomic analysis reveals bees and wasps (Hymenoptera) at the base of the radiation of Holometabolous insects. Genome Research. 16: 1334-8. PMID 17065606 DOI: 10.1101/Gr.5204306 |
0.34 |
|
| 2006 |
Elsik CG, Worley KC, Zhang L, Milshina NV, Jiang H, Reese JT, Childs KL, Venkatraman A, Dickens CM, Weinstock GM, Gibbs RA. Community annotation: procedures, protocols, and supporting tools. Genome Research. 16: 1329-33. PMID 17065605 DOI: 10.1101/Gr.5580606 |
0.349 |
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| 2006 |
Gioia J, Qin X, Jiang H, Clinkenbeard K, Lo R, Liu Y, Fox GE, Yerrapragada S, McLeod MP, McNeill TZ, Hemphill L, Sodergren E, Wang Q, Muzny DM, Homsi FJ, ... Weinstock GM, et al. The genome sequence of Mannheimia haemolytica A1: insights into virulence, natural competence, and Pasteurellaceae phylogeny. Journal of Bacteriology. 188: 7257-66. PMID 17015664 DOI: 10.1128/Jb.00675-06 |
0.765 |
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| 2006 |
Petrosino JF, Xiang Q, Karpathy SE, Jiang H, Yerrapragada S, Liu Y, Gioia J, Hemphill L, Gonzalez A, Raghavan TM, Uzman A, Fox GE, Highlander S, Reichard M, Morton RJ, ... ... Weinstock GM, et al. Chromosome rearrangement and diversification of Francisella tularensis revealed by the type B (OSU18) genome sequence. Journal of Bacteriology. 188: 6977-85. PMID 16980500 DOI: 10.1128/Jb.00506-06 |
0.718 |
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| 2006 |
Muzny DM, Scherer SE, Kaul R, Wang J, Yu J, Sudbrak R, Buhay CJ, Chen R, Cree A, Ding Y, Dugan-Rocha S, Gill R, Gunaratne P, Harris RA, Hawes AC, ... ... Weinstock G, et al. The DNA sequence, annotation and analysis of human chromosome 3. Nature. 440: 1194-8. PMID 16641997 DOI: 10.1038/Nature04728 |
0.416 |
|
| 2006 |
Highlander SK, Weissenberger S, Alvarez LE, Weinstock GM, Berget PB. Complete nucleotide sequence of a P2 family lysogenic bacteriophage, varphiMhaA1-PHL101, from Mannheimia haemolytica serotype A1. Virology. 350: 79-89. PMID 16631219 DOI: 10.1016/J.Virol.2006.03.024 |
0.358 |
|
| 2006 |
Childers CP, Newkirk HL, Honeycutt DA, Ramlachan N, Muzney DM, Sodergren E, Gibbs RA, Weinstock GM, Womack JE, Skow LC. Comparative analysis of the bovine MHC class IIb sequence identifies inversion breakpoints and three unexpected genes. Animal Genetics. 37: 121-9. PMID 16573526 DOI: 10.1111/J.1365-2052.2005.01395.X |
0.384 |
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| 2006 |
Scherer SE, Muzny DM, Buhay CJ, Chen R, Cree A, Ding Y, Dugan-Rocha S, Gill R, Gunaratne P, Harris RA, Hawes AC, Hernandez J, Hodgson AV, Hume J, Jackson A, ... ... Weinstock G, et al. The finished DNA sequence of human chromosome 12. Nature. 440: 346-51. PMID 16541075 DOI: 10.1038/Nature04569 |
0.355 |
|
| 2005 |
Brettin T, Altherr MR, Du Y, Mason RM, Friedrich A, Potter L, Langford C, Keller TJ, Jens J, Howie H, Weyand NJ, Clary S, Prichard K, Wachocki S, Sodergren E, ... ... Weinstock G, et al. Expression capable library for studies of Neisseria gonorrhoeae, version 1.0. Bmc Microbiology. 5: 50. PMID 16137322 DOI: 10.1186/1471-2180-5-50 |
0.376 |
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| 2005 |
Nallapareddy SR, Wenxiang H, Weinstock GM, Murray BE. Molecular characterization of a widespread, pathogenic, and antibiotic resistance-receptive Enterococcus faecalis lineage and dissemination of its putative pathogenicity island Journal of Bacteriology. 187: 5709-5718. PMID 16077117 DOI: 10.1128/Jb.187.16.5709-5718.2005 |
0.346 |
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| 2005 |
Siepel A, Bejerano G, Pedersen JS, Hinrichs AS, Hou M, Rosenbloom K, Clawson H, Spieth J, Hillier LW, Richards S, Weinstock GM, Wilson RK, Gibbs RA, Kent WJ, Miller W, et al. Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes. Genome Research. 15: 1034-50. PMID 16024819 DOI: 10.1101/Gr.3715005 |
0.385 |
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| 2005 |
Eichinger L, Pachebat JA, Glöckner G, Rajandream MA, Sucgang R, Berriman M, Song J, Olsen R, Szafranski K, Xu Q, Tunggal B, Kummerfeld S, Madera M, Konfortov BA, Rivero F, ... ... Weinstock G, et al. The genome of the social amoeba Dictyostelium discoideum. Nature. 435: 43-57. PMID 15875012 DOI: 10.1038/Nature03481 |
0.39 |
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| 2005 |
Milosavljevic A, Harris RA, Sodergren EJ, Jackson AR, Kalafus KJ, Hodgson A, Cree A, Dai W, Csuros M, Zhu B, de Jong PJ, Weinstock GM, Gibbs RA. Pooled genomic indexing of rhesus macaque. Genome Research. 15: 292-301. PMID 15687293 DOI: 10.1101/Gr.3162505 |
0.415 |
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| 2005 |
Richards S, Liu Y, Bettencourt BR, Hradecky P, Letovsky S, Nielsen R, Thornton K, Hubisz MJ, Chen R, Meisel RP, Couronne O, Hua S, Smith MA, Zhang P, Liu J, ... ... Weinstock GM, et al. Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution. Genome Research. 15: 1-18. PMID 15632085 DOI: 10.1101/Gr.3059305 |
0.427 |
|
| 2004 |
McLeod MP, Qin X, Karpathy SE, Gioia J, Highlander SK, Fox GE, McNeill TZ, Jiang H, Muzny D, Jacob LS, Hawes AC, Sodergren E, Gill R, Hume J, Morgan M, ... ... Weinstock GM, et al. Complete genome sequence of Rickettsia typhi and comparison with sequences of other rickettsiae. Journal of Bacteriology. 186: 5842-55. PMID 15317790 DOI: 10.1128/Jb.186.17.5842-5855.2004 |
0.77 |
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| 2004 |
Seshadri R, Myers GS, Tettelin H, Eisen JA, Heidelberg JF, Dodson RJ, Davidsen TM, DeBoy RT, Fouts DE, Haft DH, Selengut J, Ren Q, Brinkac LM, Madupu R, Kolonay J, ... ... Weinstock GM, et al. Comparison of the genome of the oral pathogen Treponema denticola with other spirochete genomes. Proceedings of the National Academy of Sciences of the United States of America. 101: 5646-51. PMID 15064399 DOI: 10.1073/Pnas.0307639101 |
0.719 |
|
| 2004 |
Havlak P, Chen R, Durbin KJ, Egan A, Ren Y, Song XZ, Weinstock GM, Gibbs RA. The Atlas genome assembly system Genome Research. 14: 721-732. PMID 15060016 DOI: 10.1101/Gr.2264004 |
0.423 |
|
| 2004 |
Chen R, Sodergren E, Weinstock GM, Gibbs RA. Dynamic building of a BAC clone tiling path for the rat genome sequencing project Genome Research. 14: 679-684. PMID 15060010 DOI: 10.1101/Gr.2171704 |
0.414 |
|
| 2004 |
Zhang Z, Burch PE, Cooney AJ, Lanz RB, Pereira FA, Wu J, Gibbs RA, Weinstock G, Wheeler DA. Genomic analysis of the nuclear receptor family: new insights into structure, regulation, and evolution from the rat genome. Genome Research. 14: 580-90. PMID 15059999 DOI: 10.1101/Gr.2160004 |
0.346 |
|
| 2004 |
Gibbs RA, Weinstock GM, Metzker ML, Muzny DM, Sodergren EJ, Scherer S, Scott G, Steffen D, Worley KC, Burch PE, Okwuonu G, Hines S, Lewis L, DeRamo C, Delgado O, et al. Genome sequence of the Brown Norway rat yields insights into mammalian evolution. Nature. 428: 493-521. PMID 15057822 DOI: 10.1038/Nature02426 |
0.76 |
|
| 2004 |
Pal S, Mak S, Weinstock GM. Preparation of BAC libraries from bacterial genomes by in vitro packaging Methods in Molecular Biology (Clifton, N.J.). 255: 57-68. PMID 15020815 DOI: 10.1385/1-59259-752-1:057 |
0.394 |
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| 2004 |
Smajs D, Norris SJ, Weinstock GM. Construction of small genome BAC library for functional and genomic applications. Methods in Molecular Biology (Clifton, N.J.). 255: 47-56. PMID 15020814 DOI: 10.1385/1-59259-752-1:047 |
0.38 |
|
| 2004 |
Zeng J, Teng F, Weinstock GM, Murray BE. Translocation of Enterococcus faecalis strains across a monolayer of polarized human enterocyte-like T84 cells. Journal of Clinical Microbiology. 42: 1149-54. PMID 15004067 DOI: 10.1128/Jcm.42.3.1149-1154.2004 |
0.584 |
|
| 2003 |
Martin KA, Siefert JL, Yerrapragada S, Lu Y, McNeill TZ, Moreno PA, Weinstock GM, Widger WR, Fox GE. Cyanobacterial signature genes. Photosynthesis Research. 75: 211-21. PMID 16228602 DOI: 10.1023/A:1023990402346 |
0.336 |
|
| 2003 |
Gibbs RA, Weinstock GM. Evolving methods for the assembly of large genomes Cold Spring Harbor Symposia On Quantitative Biology. 68: 189-194. PMID 15338617 DOI: 10.1101/Sqb.2003.68.189 |
0.353 |
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| 2003 |
Teng F, Kawalec M, Weinstock GM, Hryniewicz W, Murray BE. An Enterococcus faecium secreted antigen, SagA, exhibits broad-spectrum binding to extracellular matrix proteins and appears essential for E. faecium growth. Infection and Immunity. 71: 5033-41. PMID 12933846 DOI: 10.1128/Iai.71.9.5033-5041.2003 |
0.573 |
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| 2003 |
McKevitt M, Patel K, Smajs D, Marsh M, McLoughlin M, Norris SJ, Weinstock GM, Palzkill T. Systematic cloning of Treponema pallidum open reading frames for protein expression and antigen discovery. Genome Research. 13: 1665-74. PMID 12805273 DOI: 10.1101/Gr.288103 |
0.348 |
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| 2003 |
Šmajs D, Šmarda J, Weinstock GM. The Escherichia fergusonii iucABCD iutA genes are located within a larger chromosomal region similar to pathogenicity islands Folia Microbiologica. 48: 139-147. PMID 12800494 DOI: 10.1007/Bf02930946 |
0.377 |
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| 2003 |
Nallapareddy SR, Weinstock GM, Murray BE. Clinical isolates of Enterococcus faecium exhibit strain-specific collagen binding mediated by Acm, a new member of the MSCRAMM family Molecular Microbiology. 47: 1733-1747. PMID 12622825 DOI: 10.1046/J.1365-2958.2003.03417.X |
0.332 |
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| 2003 |
Belmont JW, Hardenbol P, Willis TD, Yu F, Yang H, Ch'Ang LY, Huang W, Liu B, Shen Y, Tam PKH, Tsui LC, Waye MMY, Wong JTF, Zeng C, Zhang Q, ... ... Weinstock GM, et al. The international HapMap project Nature. 426: 789-796. DOI: 10.1038/Nature02168 |
0.396 |
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| 2003 |
Milosavljevic A, Csürös M, Weinstock G, Gibbs RA. Shotgun sequencing, clone pooling, and comparative strategies for mapping and sequencing Targets. 2: 245-252. DOI: 10.1016/S1477-3627(03)02379-1 |
0.399 |
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| 2002 |
Celniker SE, Wheeler DA, Kronmiller B, Carlson JW, Halpern A, Patel S, Adams M, Champe M, Dugan SP, Frise E, Hodgson A, George RA, Hoskins RA, Laverty T, Muzny DM, ... ... Weinstock G, et al. Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence. Genome Biology. 3: RESEARCH0079. PMID 12537568 DOI: 10.1186/Gb-2002-3-12-Research0079 |
0.414 |
|
| 2002 |
Smajs D, Karpathy SE, Smarda J, Weinstock GM. Colicins produced by the Escherichia fergusonii strains closely resemble colicins encoded by Escherichia coli. Fems Microbiology Letters. 208: 259-62. PMID 11959446 DOI: 10.1111/J.1574-6968.2002.Tb11091.X |
0.678 |
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| 2002 |
Teng F, Jacques-Palaz KD, Weinstock GM, Murray BE. Evidence that the enterococcal polysaccharide antigen gene (epa) cluster is widespread in Enterococcus faecalis and influences resistance to phagocytic killing of E. faecalis. Infection and Immunity. 70: 2010-5. PMID 11895965 DOI: 10.1128/Iai.70.4.2010-2015.2002 |
0.582 |
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| 2002 |
Teng F, Wang L, Singh KV, Murray BE, Weinstock GM. Involvement of PhoP-PhoS homologs in Enterococcus faecalis virulence. Infection and Immunity. 70: 1991-6. PMID 11895963 DOI: 10.1128/Iai.70.4.1991-1996.2002 |
0.638 |
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| 2002 |
Smajs D, McKevitt M, Wang L, Howell JK, Norris SJ, Palzkill T, Weinstock GM. BAC library of T. pallidum DNA in E. coli. Genome Research. 12: 515-22. PMID 11875041 DOI: 10.1101/Gr.207302 |
0.368 |
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| 2001 |
Jonas BM, Murray BE, Weinstock GM. Characterization of emeA, a norA homolog and multidrug resistance efflux pump, in Enterococcus faecalis Antimicrobial Agents and Chemotherapy. 45: 3574-3579. PMID 11709342 DOI: 10.1128/Aac.45.12.3574-3579.2001 |
0.32 |
|
| 2001 |
Chen R, Bouck JB, Weinstock GM, Gibbs RA. Comparing vertebrate whole-genome shotgun reads to the human genome Genome Research. 11: 1807-1816. PMID 11691844 DOI: 10.1101/Gr.203601 |
0.442 |
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| 2001 |
Šmajs D, Weinstock GM. The iron- and temperature-regulated cjrBC genes of Shigella and enteroinvasive Escherichia coli strains code for colicin Js uptake Journal of Bacteriology. 183: 3958-3966. PMID 11395459 DOI: 10.1128/Jb.183.13.3958-3966.2001 |
0.344 |
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| 2001 |
Šmajs D, Weinstock GM. Genetic organization of plasmid ColJs, encoding colicin Js activity, immunity, and release genes Journal of Bacteriology. 183: 3949-3957. PMID 11395458 DOI: 10.1128/Jb.183.13.3949-3957.2001 |
0.34 |
|
| 2001 |
Qin X, Singh KV, Weinstock GM, Murray BE. Characterization of fsr, a regulator controlling expression of gelatinase and serine protease in Enterococcus faecalis OG1RF. Journal of Bacteriology. 183: 3372-82. PMID 11344145 DOI: 10.1128/Jb.183.11.3372-3382.2001 |
0.524 |
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| 2001 |
Lander ES, Linton LM, Birren B, Nusbaum C, Zody MC, Baldwin J, Devon K, Dewar K, Doyle M, FitzHugh W, Funke R, Gage D, Harris K, Heaford A, Howland J, ... ... Weinstock GM, et al. Initial sequencing and analysis of the human genome. Nature. 409: 860-921. PMID 11237011 DOI: 10.1038/35057062 |
0.41 |
|
| 2001 |
Lander ES, Linton LM, Birren B, Nusbaum C, Zody MC, Baldwin J, Devon K, Dewar K, Doyle M, Fitzhugh W, Funke R, Gage D, Harris K, Heaford A, Howland J, ... ... Weinstock GM, et al. Erratum: Initial sequencing and analysis of the human genome: International Human Genome Sequencing Consortium (Nature (2001) 409 (860-921)) Nature. 412: 565-566. DOI: 10.1038/35087627 |
0.413 |
|
| 2000 |
Norris SJ, Weinstock GM. The genome sequence of Treponema pallidum, the syphilis spirochete: will clinicians benefit? Current Opinion in Infectious Diseases. 13: 29-36. PMID 11964770 DOI: 10.1097/00001432-200002000-00006 |
0.422 |
|
| 2000 |
Weinstock GM. Genomics and bacterial pathogenesis Emerging Infectious Diseases. 6: 496-504. PMID 10998381 DOI: 10.3201/Eid0605.000509 |
0.411 |
|
| 2000 |
Nallapareddy SR, Qin X, Weinstock GM, Höök M, Murray BE. Enterococcus faecalis adhesin, ace, mediates attachment to extracellular matrix proteins collagen type IV and laminin as well as collagen type I. Infection and Immunity. 68: 5218-24. PMID 10948147 DOI: 10.1128/Iai.68.9.5218-5224.2000 |
0.484 |
|
| 2000 |
Nallapareddy SR, Singh KV, Duh RW, Weinstock GM, Murray BE. Diversity of ace, a gene encoding a microbial surface component recognizing adhesive matrix molecules, from different strains of Enterococcus faecalis and evidence for production of ace during human infections Infection and Immunity. 68: 5210-5217. PMID 10948146 DOI: 10.1128/Iai.68.9.5210-5217.2000 |
0.354 |
|
| 2000 |
Weinstock GM, Smajs D, Hardham J, Norris SJ. From microbial genome sequence to applications Research in Microbiology. 151: 151-158. PMID 10865961 DOI: 10.1016/S0923-2508(00)00115-7 |
0.397 |
|
| 2000 |
Qin X, Singh KV, Weinstock GM, Murray BE. Effects of Enterococcus faecalis fsr genes on production of gelatinase and a serine protease and virulence. Infection and Immunity. 68: 2579-86. PMID 10768947 DOI: 10.1128/Iai.68.5.2579-2586.2000 |
0.547 |
|
| 2000 |
Adams MD, Celniker SE, Holt RA, Evans CA, Gocayne JD, Amanatides PG, Scherer SE, Li PW, Hoskins RA, Galle RF, George RA, Lewis SE, Richards S, Ashburner M, Henderson SN, ... ... Weinstock GM, et al. The genome sequence of Drosophila melanogaster. Science (New York, N.Y.). 287: 2185-95. PMID 10731132 DOI: 10.1126/Science.287.5461.2185 |
0.723 |
|
| 2000 |
Xu Y, Singh KV, Qin X, Murray BE, Weinstock GM. Analysis of a gene cluster of Enterococcus faecalis involved in polysaccharide biosynthesis. Infection and Immunity. 68: 815-23. PMID 10639451 DOI: 10.1128/Iai.68.2.815-823.2000 |
0.527 |
|
| 1999 |
Coque TM, Singh KV, Weinstock GM, Murray BE. Characterization of dihydrofolate reductase genes from trimethoprim- susceptible and trimethoprim-resistant strains of Enterococcus faecalis Antimicrobial Agents and Chemotherapy. 43: 141-147. PMID 9869579 DOI: 10.1128/Aac.43.1.141 |
0.367 |
|
| 1998 |
Weinstock GM, Hardham JM, McLeod MP, Sodergren EJ, Norris SJ. The genome of Treponema pallidum: new light on the agent of syphilis. Fems Microbiology Reviews. 22: 323-32. PMID 9862125 DOI: 10.1111/J.1574-6976.1998.Tb00373.X |
0.71 |
|
| 1998 |
Palzkill T, Huang W, Weinstock GM. Mapping protein-ligand interactions using whole genome phage display libraries Gene. 221: 79-83. PMID 9852952 DOI: 10.1016/S0378-1119(98)00425-9 |
0.394 |
|
| 1998 |
Qin X, Singh KV, Xu Y, Weinstock GM, Murray BE. Effect of disruption of a gene encoding an autolysin of Enterococcus faecalis OG1RF Antimicrobial Agents and Chemotherapy. 42: 2883-2888. PMID 9797220 DOI: 10.1128/Aac.42.11.2883 |
0.497 |
|
| 1998 |
Singh KV, Qin X, Weinstock GM, Murray BE. Generation and testing of mutants of Enterococcus faecalis in a mouse peritonitis model. The Journal of Infectious Diseases. 178: 1416-20. PMID 9780263 DOI: 10.1086/314453 |
0.502 |
|
| 1998 |
Singh KV, Coque TM, Weinstock GM, Murray BE. In vivo testing of an Enterococcus faecalis efaA mutant and use of efaA homologs for species identification Fems Immunology and Medical Microbiology. 21: 323-331. PMID 9753005 DOI: 10.1111/J.1574-695X.1998.Tb01180.X |
0.328 |
|
| 1998 |
Xu Y, Murray BE, Weinstock GM. A cluster of genes involved in polysaccharide biosynthesis from Enterococcus faecalis OG1RF Infection and Immunity. 66: 4313-4323. PMID 9712783 DOI: 10.1128/Iai.66.9.4313-4323.1998 |
0.327 |
|
| 1998 |
Fraser CM, Norris SJ, Weinstock GM, White O, Sutton GG, Dodson R, Gwinn M, Hickey EK, Clayton R, Ketchum KA, Sodergren E, Hardham JM, McLeod MP, Salzberg S, Peterson J, et al. Complete genome sequence of Treponema pallidum, the syphilis spirochete. Science (New York, N.Y.). 281: 375-88. PMID 9665876 DOI: 10.1126/Science.281.5375.375 |
0.722 |
|
| 1998 |
Norris SJ, Fraser CM, Weinstock GM. Illuminating the agent of syphilis: The Treponema pallidum genome project Electrophoresis. 19: 551-553. PMID 9588801 DOI: 10.1002/Elps.1150190415 |
0.407 |
|
| 1998 |
Teng F, Murray BE, Weinstock GM. Conjugal transfer of plasmid DNA from Escherichia coli to enterococci: a method to make insertion mutations. Plasmid. 39: 182-6. PMID 9571134 DOI: 10.1006/Plas.1998.1336 |
0.583 |
|
| 1998 |
Malathum K, Singh KV, Weinstock GM, Murray BE. Repetitive sequence-based PCR versus pulsed-field gel electrophoresis for typing of Enterococcus faecalis at the subspecies level Journal of Clinical Microbiology. 36: 211-215. PMID 9431949 DOI: 10.1128/Jcm.36.1.211-215.1998 |
0.31 |
|
| 1998 |
Qin X, Teng F, Xu Y, Singh KV, Weinstock GM, Murray BE. Targeted mutagenesis of enterococcal genes Methods in Cell Science. 20: 21-33. DOI: 10.1023/A:1009803328200 |
0.534 |
|
| 1997 |
Choudhary M, Mackenzie C, Nereng K, Sodergren E, Weinstock GM, Kaplan S. Low-resolution sequencing of Rhodobacter sphaeroides 2,4.1(T): Chromosome II is a true chromosome Microbiology. 143: 3085-3099. PMID 9353914 DOI: 10.1099/00221287-143-10-3085 |
0.419 |
|
| 1997 |
Hardham JM, Stamm LV, Porcella SF, Frye JG, Barnes NY, Howell JK, Mueller SL, Radolf JD, Weinstock GM, Norris SJ. Identification and transcriptional analysis of a Treponema pallidum operon encoding a putative ABC transport system, an iron-activated repressor protein homolog, and a glycolytic pathway enzyme homolog. Gene. 197: 47-64. PMID 9332349 DOI: 10.1016/S0378-1119(97)00234-5 |
0.328 |
|
| 1997 |
Xu Y, Jiang L, Murray BE, Weinstock GM. Enterococcus faecalis antigens in human infections Infection and Immunity. 65: 4207-4215. PMID 9317028 DOI: 10.1128/Iai.65.10.4207-4215.1997 |
0.41 |
|
| 1997 |
Sohocki MM, Sullivan LS, Harrison WR, Sodergren EJ, Elder FFB, Weinstock G, Tanase S, Daiger SP. Human glutamate pyruvate transaminase (GPT): Localization to 8q24.3, cDNA and genomic sequences, and polymorphic sites Genomics. 40: 247-252. PMID 9119391 DOI: 10.1006/Geno.1996.4604 |
0.381 |
|
| 1996 |
You Y, Elmore S, Colton LL, Mackenzie C, Stoops JK, Weinstock GM, Norris SJ. Characterization of the cytoplasmic filament protein gene (cfpA) of Treponema pallidum subsp. pallidum Journal of Bacteriology. 178: 3177-3187. PMID 8655496 DOI: 10.1128/Jb.178.11.3177-3187.1996 |
0.399 |
|
| 1995 |
Walker EM, Howell JK, You Y, Hoffmaster AR, Heath JD, Weinstock GM, Norris SJ. Physical map of the genome of Treponema pallidum subsp. pallidum (Nichols). Journal of Bacteriology. 177: 1797-804. PMID 7896703 DOI: 10.1128/Jb.177.7.1797-1804.1995 |
0.351 |
|
| 1995 |
Mackenzie C, Chidambaram M, Sodergren EJ, Kaplan S, Weinstock GM. DNA repair mutants of Rhodobacter sphaeroides Journal of Bacteriology. 177: 3027-3035. PMID 7768798 DOI: 10.1128/Jb.177.11.3027-3035.1995 |
0.386 |
|
| 1995 |
Karlin S, Weinstock GM, Brendel V. Bacterial classifications derived from recA protein sequence comparisons. Journal of Bacteriology. 177: 6881-93. PMID 7592482 DOI: 10.1128/Jb.177.23.6881-6893.1995 |
0.375 |
|
| 1995 |
Li X, Weinstock GM, Murray BE. Generation of auxotrophic mutants of Enterococcus faecalis Journal of Bacteriology. 177: 6866-6873. PMID 7592480 DOI: 10.1128/Jb.177.23.6866-6873.1995 |
0.35 |
|
| 1994 |
Highlander SK, Weinstock GM. Static DNA bending and protein interactions within the Pasteurella haemolytica leukotoxin promoter region: Development of an activation model for leukotoxin transcriptional control Dna and Cell Biology. 13: 171-181. PMID 8179822 DOI: 10.1089/Dna.1994.13.171 |
0.314 |
|
| 1993 |
Highlander SK, Wickersham EA, Garza O, Weinstock GM. Expression of the Pasteurella haemolytica leukotoxin is inhibited by a locus that encodes an ATP-binding cassette homolog Infection and Immunity. 61: 3942-3951. PMID 8359916 DOI: 10.1128/Iai.61.9.3942-3951.1993 |
0.375 |
|
| 1993 |
Murray BE, Singh KV, Ross RP, Heath JD, Dunny GM, Weinstock GM. Generation of restriction map of Enterococcus faecalis OG1 and investigation of growth requirements and regions encoding biosynthetic function Journal of Bacteriology. 175: 5216-5223. PMID 8349561 DOI: 10.1128/Jb.175.16.5216-5223.1993 |
0.358 |
|
| 1992 |
Heath JD, Perkins JD, Sharma B, Weinstock GM. NotI genomic cleavage map of Escherichia coli K-12 strain MG1655. Journal of Bacteriology. 174: 558-67. PMID 1729244 DOI: 10.1128/Jb.174.2.558-567.1992 |
0.388 |
|
| 1992 |
Eraso JM, Weinstock GM. Anaerobic control of colicin E1 production Journal of Bacteriology. 174: 5101-5109. PMID 1629167 DOI: 10.1128/Jb.174.15.5101-5109.1992 |
0.301 |
|
| 1992 |
Lupski JR, Weinstock GM. Short, interspersed repetitive DNA sequences in prokaryotic genomes Journal of Bacteriology. 174: 4525-4529. PMID 1624445 DOI: 10.1128/Jb.174.14.4525-4529.1992 |
0.408 |
|
| 1992 |
Perkins JD, Heath JD, Sharma BR, Weinstock GM. SfiI genomic cleavage map of Escherichia coli K-12 strain MG1655. Nucleic Acids Research. 20: 1129-37. PMID 1312707 DOI: 10.1093/Nar/20.5.1129 |
0.308 |
|
| 1990 |
Highlander SK, Engler MJ, Weinstock GM. Secretion and expression of the Pasteurella haemolytica leukotoxin Journal of Bacteriology. 172: 2343-2350. PMID 2185213 DOI: 10.1128/Jb.172.5.2343-2350.1990 |
0.32 |
|
| 1990 |
Murray BE, Singh KV, Heath JD, Sharma BR, Weinstock GM. Comparison of genomic DNAs of different enterococcal isolates using restriction endonucleases with infrequent recognition sites. Journal of Clinical Microbiology. 28: 2059-63. PMID 1977766 DOI: 10.1128/Jcm.28.9.2059-2063.1990 |
0.333 |
|
| 1989 |
Salles B, Weinstock GM. Mutation of the promoter and LexA binding sites of cea, the gene encoding colicin E1 Mgg Molecular &Amp; General Genetics. 215: 483-489. PMID 2651893 DOI: 10.1007/Bf00427047 |
0.309 |
|
| 1989 |
Zoltick PW, Leibowitz JL, DeVries JR, Weinstock GM, Weiss SR. A general method for the induction and screening of antisera for cDNA-encoded polypeptides: antibodies specific for a coronavirus putative polymerase-encoding gene. Gene. 85: 413-20. PMID 2560756 DOI: 10.1016/0378-1119(89)90434-4 |
0.32 |
|
| 1988 |
Bremer E, Silhavy TJ, Weinstock GM. Transposition of λplacMu is mediated by the A protein altered at its carboxy-terminal end Gene. 71: 177-186. PMID 2850974 DOI: 10.1016/0378-1119(88)90089-3 |
0.378 |
|
| 1988 |
Leibowitz JL, Perlman S, Weinstock G, DeVries JR, Budzilowicz C, Weissemann JM, Weiss SR. Detection of a murine coronavirus nonstructural protein encoded in a downstream open reading frame. Virology. 164: 156-64. PMID 2834866 DOI: 10.1016/0042-6822(88)90631-9 |
0.319 |
|
| 1987 |
Weinstock GM. [9] Use of open reading frame expression vectors Methods in Enzymology. 154: 156-163. PMID 3323809 DOI: 10.1016/0076-6879(87)54075-7 |
0.336 |
|
| 1985 |
Weisemann JM, Weinstock GM. Direct selection of mutations reducing transcription or translation of the recA gene of Escherichia coli with a recA-lacZ protein fusion Journal of Bacteriology. 163: 748-755. PMID 3160689 DOI: 10.1128/Jb.163.2.748-755.1985 |
0.344 |
|
| 1985 |
Weisemann JM, Weinstock GM. Use of transcription and translation signals from the colicin El gene to express DNA sequences in Escherichia coli Gene Analysis Techniques. 2: 9-16. DOI: 10.1016/0735-0651(85)90014-7 |
0.361 |
|
| 1984 |
Weisemann JM, Funk C, Weinstock GM. Measurement of in vivo expression of the recA gene of Escherichia coli by using lacZ gene fusions Journal of Bacteriology. 160: 112-121. PMID 6090405 DOI: 10.1128/Jb.160.1.112-121.1984 |
0.328 |
|
| 1983 |
Weinstock GM, Ap Rhys C, Berman ML, Hampar B, Jackson D, Silhavy TJ, Weisemann J, Zweig M. Open reading frame expression vectors: A general method for antigen production in Escherichia coli using protein fusions to β-galactosidase Proceedings of the National Academy of Sciences of the United States of America. 80: 4432-4436. PMID 6308625 DOI: 10.1073/Pnas.80.14.4432 |
0.36 |
|
| 1981 |
McEntee K, Weinstock GM. tif-1 Mutation alters polynucleotide recognition by the recA protein of Escherichia coli Proceedings of the National Academy of Sciences of the United States of America. 78: 6061-6065. PMID 7031642 DOI: 10.1073/Pnas.78.10.6061 |
0.313 |
|
| 1981 |
McEntee K, Weinstock GM, Lehman IR. DNA and nucleoside triphosphate binding properties of recA protein from Escherichia coli. Progress in Nucleic Acid Research and Molecular Biology. 26: 265-79. PMID 7025096 DOI: 10.1016/S0079-6603(08)60411-0 |
0.52 |
|
| 1981 |
Weinstock GM, McEntee K, Lehman IR. Hydrolysis of nucleoside triphosphates catalyzed by the recA protein of Escherichia coli. Hydrolysis of UTP. The Journal of Biological Chemistry. 256: 8856-8. PMID 7021554 |
0.456 |
|
| 1981 |
McEntee K, Weinstock GM, Lehman IR. Binding of the recA protein of Escherichia coli to single- and double-stranded DNA. The Journal of Biological Chemistry. 256: 8835-44. PMID 7021553 |
0.473 |
|
| 1981 |
Weinstock GM, McEntee K, Lehman IR. Hydrolysis of nucleoside triphosphates catalyzed by the recA protein of Escherichia coli. Characterization of ATP hydrolysis. The Journal of Biological Chemistry. 256: 8829-34. PMID 7021552 |
0.477 |
|
| 1981 |
Weinstock GM, McEntee K, Lehman IR. Interaction of the recA protein of Escherichia coli with adenosine 5'-O-(3-thiotriphosphate). The Journal of Biological Chemistry. 256: 8850-5. PMID 6455430 |
0.464 |
|
| 1981 |
Weinstock GM, McEntee K, Lehman IR. Hydrolysis of nucleoside triphosphates catalyzed by the recA protein of Escherichia coli. Steady state kinetic analysis of ATP hydrolysis. The Journal of Biological Chemistry. 256: 8845-9. PMID 6455429 |
0.459 |
|
| 1981 |
Mcentee K, Weinstock GM. 22 The recA Enzyme of Escherichia coli and Recombination Assays Enzymes. 14: 445-470. DOI: 10.1016/S1874-6047(08)60348-0 |
0.304 |
|
| 1980 |
Shortle D, Koshland D, Weinstock GM, Botstein D. Segment-directed mutagenesis: Construction in vitro of point mutations limited to a small predetermined region of a circular DNA molecule Proceedings of the National Academy of Sciences of the United States of America. 77: 5375-5379. PMID 6254078 DOI: 10.1073/Pnas.77.9.5375 |
0.759 |
|
| 1980 |
Weinstock GM, Botstein D. Genetics of bacteriophage P22. IV. Correlation of genetic and physical map using translocatable drug-resistance elements Virology. 106: 92-99. PMID 6251623 DOI: 10.1016/0042-6822(80)90224-X |
0.495 |
|
| 1980 |
Weinstock GM, Riggs PD, Botstein D. Genetics of bacteriophage P22: III. The late operon Virology. 106: 82-91. PMID 6251622 DOI: 10.1016/0042-6822(80)90223-8 |
0.496 |
|
| 1980 |
McEntee K, Weinstock GM, Lehman IR. recA protein-catalyzed strand assimilation: stimulation by Escherichia coli single-stranded DNA-binding protein. Proceedings of the National Academy of Sciences of the United States of America. 77: 857-61. PMID 6244589 DOI: 10.1073/Pnas.77.2.857 |
0.534 |
|
| 1979 |
McEntee K, Weinstock GM, Lehman IR. Initiation of general recombination catalyzed in vitro by the recA protein of Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America. 76: 2615-9. PMID 379861 DOI: 10.1073/Pnas.76.6.2615 |
0.53 |
|
| 1979 |
Weinstock GM, McEntee K, Lehman IR. ATP-dependent renaturation of DNA catalyzed by the recA protein of Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America. 76: 126-30. PMID 370822 DOI: 10.1073/Pnas.76.1.126 |
0.544 |
|
| 1979 |
Weinstock GM, Botstein D. Regional specificity of illegitimate recombination associated with the translocatable ampicillin-resistance element Tn1 Cold Spring Harbor Symposia On Quantitative Biology. 43: 1209-1215. PMID 290441 DOI: 10.1101/Sqb.1979.043.01.137 |
0.462 |
|
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