Year |
Citation |
Score |
2019 |
Keloth VK, He Z, Elhanan G, Geller J. Alternative Classification of Identical Concepts in Different Terminologies: Different Ways to View the World. Journal of Biomedical Informatics. 103193. PMID 31048072 DOI: 10.1016/J.Jbi.2019.103193 |
0.321 |
|
2018 |
Zheng L, Chen Y, Elhanan G, Perl Y, Geller J, Ochs C. Complex overlapping concepts: An effective auditing methodology for families of similarly structured BioPortal ontologies. Journal of Biomedical Informatics. PMID 29852316 DOI: 10.1016/J.Jbi.2018.05.015 |
0.362 |
|
2017 |
He Z, Perl Y, Elhanan G, Chen Y, Geller J, Bian J. Auditing the Assignments of Top-Level Semantic Types in the UMLS Semantic Network to UMLS Concepts. Proceedings. Ieee International Conference On Bioinformatics and Biomedicine. 2017: 1262-1269. PMID 29375930 DOI: 10.1109/BIBM.2017.8217840 |
0.304 |
|
2017 |
Zheng L, Yumak H, Chen L, Ochs C, Geller J, Kapusnik-Uner J, Perl Y. Quality Assurance of Chemical Ingredient Classification for the National Drug File - Reference Terminology. Journal of Biomedical Informatics. PMID 28723580 DOI: 10.1016/J.Jbi.2017.07.013 |
0.348 |
|
2017 |
Ochs C, Perl Y, Geller J, Arabandi S, Tudorache T, Musen MA. An Empirical Analysis of Ontology Reuse in BioPortal. Journal of Biomedical Informatics. PMID 28583809 DOI: 10.1016/J.Jbi.2017.05.021 |
0.354 |
|
2016 |
Perl Y, Geller J, Halper M, Ochs C, Zheng L, Kapusnik-Uner J. Introducing the Big Knowledge to Use (BK2U) challenge. Annals of the New York Academy of Sciences. PMID 27750400 DOI: 10.1111/Nyas.13225 |
0.319 |
|
2016 |
Ochs C, Geller J, Perl Y, Musen MA. A Unified Software Framework for Deriving, Visualizing, and Exploring Abstraction Networks for Ontologies. Journal of Biomedical Informatics. PMID 27345947 DOI: 10.1016/J.Jbi.2016.06.008 |
0.388 |
|
2016 |
Ochs C, Perl Y, Halper M, Geller J, Lomax J. Quality assurance of the gene ontology using abstraction networks. Journal of Bioinformatics and Computational Biology. 14: 1642001. PMID 27301779 DOI: 10.1142/S0219720016420014 |
0.379 |
|
2016 |
Ochs C, He Z, Zheng L, Geller J, Perl Y, Hripcsak G, Musen MA. Utilizing a structural meta-ontology for family-based quality assurance of the BioPortal ontologies. Journal of Biomedical Informatics. PMID 26988001 DOI: 10.1016/J.Jbi.2016.03.007 |
0.36 |
|
2015 |
Ochs C, Perl Y, Geller J, Haendel M, Brush M, Arabandi S, Tu S. Summarizing and visualizing structural changes during the evolution of biomedical ontologies using a Diff Abstraction Network. Journal of Biomedical Informatics. PMID 26048076 DOI: 10.1016/J.Jbi.2015.05.018 |
0.374 |
|
2015 |
He Z, Geller J, Chen Y. A comparative analysis of the density of the SNOMED CT conceptual content for semantic harmonization. Artificial Intelligence in Medicine. 64: 29-40. PMID 25890688 DOI: 10.1016/J.Artmed.2015.03.002 |
0.343 |
|
2015 |
Ochs C, Geller J, Perl Y, Chen Y, Xu J, Min H, Case JT, Wei Z. Scalable quality assurance for large SNOMED CT hierarchies using subject-based subtaxonomies. Journal of the American Medical Informatics Association : Jamia. 22: 507-18. PMID 25336594 DOI: 10.1136/Amiajnl-2014-003151 |
0.309 |
|
2015 |
Ochs C, Geller J, Perl Y, Chen Y, Agrawal A, Case JT, Hripcsak G. A tribal abstraction network for SNOMED CT target hierarchies without attribute relationships. Journal of the American Medical Informatics Association : Jamia. 22: 628-39. PMID 25332354 DOI: 10.1136/Amiajnl-2014-003173 |
0.336 |
|
2014 |
He Z, Morrey CP, Perl Y, Elhanan G, Chen L, Chen Y, Geller J. Sculpting the UMLS Refined Semantic Network. Online Journal of Public Health Informatics. 6: e181. PMID 25422719 DOI: 10.5210/Ojphi.V6I2.5412 |
0.399 |
|
2014 |
Rudniy A, Song M, Geller J. Mapping biological entities using the longest approximately common prefix method. Bmc Bioinformatics. 15: 187. PMID 24928653 DOI: 10.1186/1471-2105-15-187 |
0.346 |
|
2013 |
Geller J, He Z, Perl Y, Morrey CP, Xu J. Rule-based support system for multiple UMLS semantic type assignments. Journal of Biomedical Informatics. 46: 97-110. PMID 23041716 DOI: 10.1016/J.Jbi.2012.09.007 |
0.372 |
|
2012 |
Gu HH, Elhanan G, Perl Y, Hripcsak G, Cimino JJ, Xu J, Chen Y, Geller J, Paul Morrey C. A study of terminology auditors' performance for UMLS semantic type assignments. Journal of Biomedical Informatics. 45: 1042-8. PMID 22687822 DOI: 10.1016/J.Jbi.2012.05.006 |
0.334 |
|
2012 |
Chen Y, Gu H, Perl Y, Geller J. Overcoming an obstacle in expanding a UMLS semantic type extent. Journal of Biomedical Informatics. 45: 61-70. PMID 21925287 DOI: 10.1016/J.Jbi.2011.08.021 |
0.394 |
|
2012 |
Wang Y, Halper M, Wei D, Perl Y, Geller J. Abstraction of complex concepts with a refined partial-area taxonomy of SNOMED. Journal of Biomedical Informatics. 45: 15-29. PMID 21878396 DOI: 10.1016/J.Jbi.2011.08.013 |
0.368 |
|
2011 |
Tian T, Chun SA, Geller J. A prediction model for web search hit counts using word frequencies Journal of Information Science. 37: 462-475. DOI: 10.1177/0165551511415183 |
0.313 |
|
2009 |
Morrey CP, Geller J, Halper M, Perl Y. The Neighborhood Auditing Tool: a hybrid interface for auditing the UMLS. Journal of Biomedical Informatics. 42: 468-89. PMID 19475725 DOI: 10.1016/J.Jbi.2009.01.006 |
0.408 |
|
2009 |
Huang KC, Geller J, Halper M, Perl Y, Xu J. Using WordNet synonym substitution to enhance UMLS source integration. Artificial Intelligence in Medicine. 46: 97-109. PMID 19117739 DOI: 10.1016/J.Artmed.2008.11.008 |
0.329 |
|
2009 |
Chen Y, Gu HH, Perl Y, Geller J. Structural group-based auditing of missing hierarchical relationships in UMLS. Journal of Biomedical Informatics. 42: 452-67. PMID 18824248 DOI: 10.1016/J.Jbi.2008.08.006 |
0.382 |
|
2009 |
Chen Y, Gu HH, Perl Y, Geller J, Halper M. Structural group auditing of a UMLS semantic type's extent. Journal of Biomedical Informatics. 42: 41-52. PMID 18619563 DOI: 10.1016/J.Jbi.2008.06.001 |
0.382 |
|
2008 |
Chen Y, Perl Y, Geller J, Hripcsak G, Zhang L. Comparing and consolidating two heuristic metaschemas. Journal of Biomedical Informatics. 41: 293-317. PMID 18158275 DOI: 10.1016/J.Jbi.2007.11.001 |
0.376 |
|
2008 |
Geller J, Chun SA, Jung Y. Toward the semantic deep web Computer. 41: 95-97. DOI: 10.1109/Mc.2008.402 |
0.326 |
|
2006 |
Min H, Perl Y, Chen Y, Halper M, Geller J, Wang Y. Auditing as part of the terminology design life cycle. Journal of the American Medical Informatics Association : Jamia. 13: 676-90. PMID 16929044 DOI: 10.1197/Jamia.M2036 |
0.31 |
|
2006 |
Lee Y, Geller J. Semantic enrichment for medical ontologies. Journal of Biomedical Informatics. 39: 209-26. PMID 16185937 DOI: 10.1016/J.Jbi.2005.08.001 |
0.39 |
|
2006 |
Lee Y, Supekar K, Geller J. Ontology integration: experience with medical terminologies. Computers in Biology and Medicine. 36: 893-919. PMID 16157328 DOI: 10.1016/J.Compbiomed.2005.04.013 |
0.338 |
|
2005 |
Zhang L, Halper M, Perl Y, Geller J, Cimino JJ. Relationship structures and semantic type assignments of the UMLS Enriched Semantic Network. Journal of the American Medical Informatics Association : Jamia. 12: 657-66. PMID 16049233 DOI: 10.1197/Jamia.M1605 |
0.4 |
|
2005 |
Zhang L, Hripcsak G, Perl Y, Halper M, Geller J. An expert study evaluating the UMLS lexical metaschema. Artificial Intelligence in Medicine. 34: 219-33. PMID 15996860 DOI: 10.1016/J.Artmed.2005.01.002 |
0.398 |
|
2005 |
Zhang L, Perl Y, Halper M, Geller J, Hripcsak G. A lexical metaschema for the UMLS semantic network. Artificial Intelligence in Medicine. 33: 41-59. PMID 15617981 DOI: 10.1016/J.Artmed.2004.06.002 |
0.376 |
|
2004 |
Zhang L, Perl Y, Halper M, Geller J, Cimino JJ. An enriched unified medical language system semantic network with a multiple subsumption hierarchy. Journal of the American Medical Informatics Association : Jamia. 11: 195-206. PMID 14764611 DOI: 10.1197/Jamia.M1269 |
0.392 |
|
2004 |
Geller J, Perl Y, Lee J. Editorial: Ontology Challenges: A Thumbnail Historical Perspective Knowledge and Information Systems. 6: 375-379. DOI: 10.1007/S10115-003-0134-5 |
0.401 |
|
2004 |
Gu H, Perl Y, Geller J, Neuhold EJ. Contextual Partitioning for Comprehension of OODB Schemas Knowledge and Information Systems. 6: 315-344. DOI: 10.1007/S10115-003-0102-0 |
0.406 |
|
2003 |
Zhang L, Perl Y, Halper M, Geller J. Designing metaschemas for the UMLS enriched semantic network. Journal of Biomedical Informatics. 36: 433-49. PMID 14759817 DOI: 10.1016/J.Jbi.2003.11.006 |
0.402 |
|
2003 |
Geller J. John Sowa, Knowledge Representation: Logical, Philosophical, and Computational Foundations, Brooks/Cole, 2000, 512 pp., $70.95 (cloth), ISBN 0-534-94965-7 Minds and Machines. 13: 441-444. DOI: 10.1023/A:1024132024747 |
0.312 |
|
2003 |
Halper M, Liu LM, Geller J, Perl Y. Frameworks for incorporating semantic relationships into object-oriented database systems Concurrency Computation Practice and Experience. 15: 1337-1362. DOI: 10.1002/Cpe.733 |
0.383 |
|
2003 |
Liu LM, Geller J, Perl Y. Enhancing OODB semantics to support browsing in an OODB vacabulary representation Concurrency Computation Practice and Experience. 15: 845-869. DOI: 10.1002/Cpe.732 |
0.393 |
|
2002 |
Perl Y, Chen Z, Halper M, Geller J, Zhang L, Peng Y. The cohesive metaschema: a higher-level abstraction of the UMLS Semantic Network. Journal of Biomedical Informatics. 35: 194-212. PMID 12669983 DOI: 10.1016/S1532-0464(02)00528-2 |
0.439 |
|
2002 |
Liu LM, Halper M, Geller J, Perl Y. Using OODB modeling to partition a vocabulary into structurally and semantically uniform concept groups Ieee Transactions On Knowledge and Data Engineering. 14: 850-866. DOI: 10.1109/Tkde.2002.1019218 |
0.433 |
|
2002 |
Lee Y, Geller J. Efficient Transitive Closure Reasoning in a Combined Class/Part/Containment Hierarchy Knowledge and Information Systems. 4: 305-328. DOI: 10.1007/S101150200009 |
0.355 |
|
2001 |
Gu H, Perl Y, Halper M, Geller J, Kuo E, Cimino JJ. Partitioning an object-oriented terminology schema Methods of Information in Medicine. 40: 204-212. PMID 11501633 DOI: 10.1055/S-0038-1634167 |
0.329 |
|
2000 |
Gu H, Perl Y, Geller J, Halper M, Liu LM, Cimino JJ. Representing the UMLS as an object-oriented database: Modeling issues and advantages Journal of the American Medical Informatics Association. 7: 66-80. PMID 10641964 DOI: 10.1136/Jamia.2000.0070066 |
0.435 |
|
1999 |
Gu H, Halper M, Geller J, Perl Y. Benefits of an object-oriented database representation for controlled medical terminologies Journal of the American Medical Informatics Association. 6: 283-303. PMID 10428002 DOI: 10.1136/Jamia.1999.0060283 |
0.391 |
|
1999 |
Gu H, Perl Y, Geller J, Halper M, Singh M. A methodology for partitioning a vocabulary hierarchy into trees Artificial Intelligence in Medicine. 15: 77-98. PMID 9930617 DOI: 10.1016/S0933-3657(98)00046-3 |
0.365 |
|
1999 |
Liu LM, Halper M, Geller J, Perl Y. Controlled vocabularies in OODBs: Modeling issues and implementation Distributed and Parallel Databases. 7: 37-65. DOI: 10.1023/A:1008682210559 |
0.4 |
|
1997 |
Lee E(, Geller J. Parallel operations on class hierarchies with double strand representation Machine Intelligence and Pattern Recognition. 20: 69-94. DOI: 10.1016/S0923-0459(97)80005-5 |
0.319 |
|
1993 |
ADAM NR, GANGOPADHYAY A, GELLER J. DESIGN AND IMPLEMENTATION OF A KNOWLEDGE-BASED QUERY PROCESSOR International Journal of Cooperative Information Systems. 2: 107-125. DOI: 10.1142/S021821579300006X |
0.341 |
|
1993 |
Geller J, Perl Y, Cannata P, Sheth A, Neuhold E. Structural integration: Concepts and case study Journal of Systems Integration. 3: 133-161. DOI: 10.1007/Bf01974954 |
0.351 |
|
1992 |
Geller J, Perl Y, Neuhold E, Sheth A. Structural schema integration with full and partial correspondence using the dual model Information Systems. 17: 443-464. DOI: 10.1016/0306-4379(92)90025-I |
0.353 |
|
1991 |
Geller J. Propositional representation for graphical knowledge International Journal of Man-Machine Studies. 34: 97-131. DOI: 10.1016/0020-7373(91)90052-9 |
0.384 |
|
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