Mark T. Stacey - Publications

Civil and Environmental Engineering University of California, Berkeley, Berkeley, CA 
Environmental Engineering, Civil Engineering, Physical Oceanography

58 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2015 Becherer J, Stacey MT, Umlauf L, Burchard H. Lateral circulation generates flood tide stratification and estuarine exchange flow in a curved tidal inlet Journal of Physical Oceanography. 45: 638-656. DOI: 10.1175/Jpo-D-14-0001.1  1
2015 Chou YJ, Holleman RC, Fringer OB, Stacey MT, Monismith SG, Koseff JR. Three-dimensional wave-coupled hydrodynamics modeling in South San Francisco Bay Computers and Geosciences. 85: 10-21. DOI: 10.1016/J.Cageo.2015.08.010  1
2014 Holleman RC, Stacey MT. Coupling of sea level rise, tidal amplification, and inundation Journal of Physical Oceanography. 44: 1439-1455. DOI: 10.1175/Jpo-D-13-0214.1  1
2014 Moniz RJ, Fong DA, Woodson CB, Willis SK, Stacey MT, Monismith SG. Scale-dependent dispersion within the stratified interior on the shelf of northern Monterey Bay Journal of Physical Oceanography. 44: 1049-1064. DOI: 10.1175/Jpo-D-12-0229.1  1
2014 Giddings SN, Monismith SG, Fong DA, Stacey MT. Using depth-normalized coordinates to examine mass transport residual circulation in estuaries with large tidal amplitude relative to the mean depth Journal of Physical Oceanography. 44: 128-148. DOI: 10.1175/Jpo-D-12-0201.1  1
2014 Lacy JR, Gladding S, Brand A, Collignon A, Stacey M. Lateral Baroclinic Forcing Enhances Sediment Transport from Shallows to Channel in an Estuary Estuaries and Coasts. 37: 1058-1077. DOI: 10.1007/s12237-013-9748-3  1
2013 Collignon AG, Stacey MT. Turbulence dynamics at the shoal-channel interface in a partially stratified estuary Journal of Physical Oceanography. 43: 970-989. DOI: 10.1175/Jpo-D-12-0115.1  1
2013 Holleman RC, Stacey MT. Transient dispersion regimes Journal of Fluid Mechanics. 736: 130-149. DOI: 10.1017/Jfm.2013.535  1
2013 Hsu K, Stacey MT, Holleman RC. Exchange Between an Estuary and an Intertidal Marsh and Slough Estuaries and Coasts. 36: 1137-1149. DOI: 10.1007/S12237-013-9631-2  1
2013 Brown LR, Bennett WA, Wagner RW, Morgan-King T, Knowles N, Feyrer F, Schoellhamer DH, Stacey MT, Dettinger M. Implications for Future Survival of Delta Smelt from Four Climate Change Scenarios for the Sacramento-San Joaquin Delta, California Estuaries and Coasts. 36: 754-774. DOI: 10.1007/S12237-013-9585-4  1
2012 Schuech R, Stacey MT, Barad MF, Koehl MA. Numerical simulations of odorant detection by biologically inspired sensor arrays. Bioinspiration & Biomimetics. 7: 016001. PMID 22155966 DOI: 10.1088/1748-3182/7/1/016001  1
2012 Collignon AG, Stacey MT. Intratidal dynamics of fronts and lateral circulation at the shoal-channel interface in a partially stratified estuary Journal of Physical Oceanography. 42: 869-883. DOI: 10.1175/Jpo-D-11-065.1  1
2012 Stacey MT, Rippeth TP, Nash JD. Turbulence and Stratification in Estuaries and Coastal Seas Treatise On Estuarine and Coastal Science. 2: 9-35. DOI: 10.1016/B978-0-12-374711-2.00204-7  1
2011 Cloern JE, Knowles N, Brown LR, Cayan D, Dettinger MD, Morgan TL, Schoellhamer DH, Stacey MT, van der Wegen M, Wagner RW, Jassby AD. Projected evolution of California's San Francisco Bay-Delta-river system in a century of climate change. Plos One. 6: e24465. PMID 21957451 DOI: 10.1371/Journal.Pone.0024465  1
2011 Steinbuck JV, Koseff JR, Genin A, Stacey MT, Monismith SG. Horizontal dispersion of ocean tracers in internal wave shear Journal of Geophysical Research: Oceans. 116. DOI: 10.1029/2011Jc007213  1
2011 Tossavainen OP, Percelay J, Stacey M, Kaipio JP, Bayen A. State estimation and modeling error approach for 2-D shallow water equations and Lagrangian measurements Water Resources Research. 47. DOI: 10.1029/2010Wr009401  1
2011 MacVean LJ, Stacey MT. Estuarine Dispersion from Tidal Trapping: A New Analytical Framework Estuaries and Coasts. 34: 45-59. DOI: 10.1007/S12237-010-9298-X  1
2010 Cousins M, Stacey MT, Drake JL. Effects of seasonal stratification on turbulent mixing in a hypereutrophic coastal lagoon Limnology and Oceanography. 55: 172-186. DOI: 10.4319/Lo.2010.55.1.0172  1
2010 Stacey MT, Brennan ML, Burau JR, Monismith SG. The tidally averaged momentum balance in a partially and periodically stratified estuary Journal of Physical Oceanography. 40: 2418-2434. DOI: 10.1175/2010Jpo4389.1  1
2010 Rowland JC, Dietrich WE, Stacey MT. Morphodynamics of subaqueous levee formation: Insights into river mouth morphologies arising from experiments Journal of Geophysical Research: Earth Surface. 115. DOI: 10.1029/2010Jf001684  1
2010 Brand A, Lacy JR, Hsu K, Hoover D, Gladding S, Stacey MT. Wind-enhanced resuspension in the shallow waters of South San Francisco Bay: Mechanisms and potential implications for cohesive sediment transport Journal of Geophysical Research: Oceans. 115. DOI: 10.1029/2010Jc006172  1
2010 Cloern JE, Hieb KA, Jacobson T, Sans B, Di Lorenzo E, Stacey MT, Largier JL, Meiring W, Peterson WT, Powell TM, Winder M, Jassby AD. Biological communities in San Francisco Bay track large-scale climate forcing over the North Pacific Geophysical Research Letters. 37. DOI: 10.1029/2010Gl044774  1
2010 Reidenbach MA, Limm M, Hondzo M, Stacey MT. Effects of bed roughness on boundary layer mixing and mass flux across the sediment-water interface Water Resources Research. 46. DOI: 10.1029/2009Wr008248  1
2010 Huckelbridge KH, Stacey MT, Glenn EP, Dracup JA. An integrated model for evaluating hydrology, hydrodynamics, salinity and vegetation cover in a coastal desert wetland Ecological Engineering. 36: 850-861. DOI: 10.1016/J.Ecoleng.2010.03.001  1
2010 Cheriton OM, McManus MA, Steinbuck JV, Stacey MT, Sullivan JM. Towed vehicle observations of thin layer structure and a low-salinity intrusion in Northern Monterey Bay, CA Continental Shelf Research. 30: 39-49. DOI: 10.1016/J.Csr.2009.09.005  1
2010 Sullivan JM, McManus MA, Cheriton OM, Benoit-Bird KJ, Goodman L, Wang Z, Ryan JP, Stacey M, Van Holliday D, Greenlaw C, Moline MA, McFarland M. Layered organization in the coastal ocean: An introduction to planktonic thin layers and the LOCO project Continental Shelf Research. 30: 1-6. DOI: 10.1016/J.Csr.2009.09.001  1
2009 Steinbuck JV, Stacey MT, McManus MA, Cheriton OM, Ryan JP. Observations of turbulent mixing in a phytoplankton thin layer: Implications for formation, maintenance, and breakdown Limnology and Oceanography. 54: 1353-1368. DOI: 10.4319/Lo.2009.54.4.1353  1
2009 Cheriton OM, McManus MA, Stacey MT, Steinbuck JV. Physical and biological controls on the maintenance and dissipation of a thin phytoplankton layer Marine Ecology Progress Series. 378: 55-69. DOI: 10.3354/Meps07847  1
2009 Steinbuck JV, Stacey MT, Monismith SG. An evaluation of χT estimation techniques: Implications for batchelor fitting and ε Journal of Atmospheric and Oceanic Technology. 26: 1652-1662. DOI: 10.1175/2009Jtecho611.1  1
2009 Fong DA, Monismith SG, Stacey MT, Burau JR. Turbulent stresses and secondary currents in a tidal-forced channel with significant curvature and asymmetric bed forms Journal of Hydraulic Engineering. 135: 198-208. DOI: 10.1061/(Asce)0733-9429(2009)135:3(198)  1
2009 Rowland JC, Stacey MT, Dietrich WE. Turbulent characteristics of a shallow wall-bounded plane jet: Experimental implications for river mouth hydrodynamics Journal of Fluid Mechanics. 627: 423-449. DOI: 10.1017/S0022112009006107  1
2009 Strub IS, Percelay J, Stacey MT, Bayen AM. Inverse estimation of open boundary conditions in tidal channels Ocean Modelling. 29: 85-93. DOI: 10.1016/J.Ocemod.2009.03.002  1
2008 Gross ES, Nidzieko NJ, Macwilliams ML, Stacey MT. Parameterization of estuarine mixing processes in the San Francisco Estuary based on analysis of three-dimensional hydrodynamic simulations Proceedings of the International Conference On Estuarine and Coastal Modeling. 322-338. DOI: 10.1061/40990(324)20  1
2008 Stacey MT, Fram JP, Chow FK. Role of tidally periodic density stratification in the creation of estuarine subtidal circulation Journal of Geophysical Research: Oceans. 113. DOI: 10.1029/2007Jc004581  1
2008 Talke SA, Stacey MT. Suspended sediment fluxes at an intertidal flat: The shifting influence of wave, wind, tidal, and freshwater forcing Continental Shelf Research. 28: 710-725. DOI: 10.1016/J.Csr.2007.12.003  1
2007 Ralston DK, Stacey MT. Tidal and meteorological forcing of sediment transport in tributary mudflat channels. Continental Shelf Research. 27: 1510-1527. PMID 21499572 DOI: 10.1016/J.Csr.2007.01.010  1
2007 Stacey MT, McManus MA, Steinbuck JV. Convergences and divergences and thin layer formation and maintenance Limnology and Oceanography. 52: 1523-1532. DOI: 10.4319/Lo.2007.52.4.1523  1
2007 Martin MA, Fram JP, Stacey MT. Seasonal chlorophyll a fluxes between the coastal Pacific Ocean and San Francisco Bay Marine Ecology Progress Series. 337: 51-61. DOI: 10.3354/Meps337051  1
2007 Fram JP, Martin MA, Stacey MT. Dispersive fluxes between the coastal ocean and a semienclosed estuarine basin Journal of Physical Oceanography. 37: 1645-1660. DOI: 10.1175/Jpo3078.1  1
2006 Ralston DK, Stacey MT. Shear and turbulence production across subtidal channels Journal of Marine Research. 64: 147-171. DOI: 10.1357/002224006776412359  1
2006 Lucas LV, Sereno DM, Burau JR, Schraga TS, Lopez CB, Stacey MT, Parchevsky KV, Parchevsky VP. Intradaily variability of water quality in a shallow tidal lagoon: Mechanisms and implications Estuaries and Coasts. 29: 711-730. DOI: 10.1007/Bf02786523  1
2005 Stacey MT, Ralston DK. The scaling and structure of the estuarine bottom boundary layer Journal of Physical Oceanography. 35: 55-71. DOI: 10.1175/Jpo-2672.1  1
2005 Ralston DK, Stacey MT. Longitudinal dispersion and lateral circulation in the intertidal zone Journal of Geophysical Research C: Oceans. 110: 1-17. DOI: 10.1029/2005Jc002888  1
2005 Ralston DK, Stacey MT. Stratification and turbulence in subtidal channels through intertidal mudflats Journal of Geophysical Research C: Oceans. 110: 1-16. DOI: 10.1029/2004Jc002650  1
2005 Rueda FJ, Schladow SG, Monismith SG, Stacey MT. On the effects of topography on wind and the generation of currents in a large multi-basin lake Hydrobiologia. 532: 139-151. DOI: 10.1007/S10750-004-9522-4  1
2004 Stacey MT. Estimation of turbulence parameters using an ADCP Joint Conference On Water Resource Engineering and Water Resources Planning and Management 2000: Building Partnerships. 104. DOI: 10.1061/40517(2000)298  1
2004 Gross ES, Stacey MT. Three-dimensional hydrodynamic modeling of Tomales Bay, California Proceedings of the International Conference On Estuarine and Coastal Modeling. 646-666.  1
2003 Stacey MT. Estimation of diffusive transport of turbulent kinetic energy from acoustic Doppler current profiler data Journal of Atmospheric and Oceanic Technology. 20: 927-935. DOI: 10.1175/1520-0426(2003)020<0927:Eodtot>2.0.Co;2  1
2003 Rueda FJ, Schladow SG, Monismith SG, Stacey MT. Dynamics of large polymictic lake. I: Field observations Journal of Hydraulic Engineering. 129: 82-91. DOI: 10.1061/(Asce)0733-9429(2003)129:2(82)  1
2003 Lacy JR, Stacey MT, Burau JR, Monismith SG. Interaction of lateral baroclinic forcing and turbulence in an estuary Journal of Geophysical Research C: Oceans. 108: 34-1. DOI: 10.1029/2002Jc001392  1
2003 Fong DA, Stacey MT. Horizontal dispersion of a near-bed coastal plume Journal of Fluid Mechanics. 239-267. DOI: 10.1017/S002211200300510X  1
2003 Talke SA, Stacey MT. The influence of oceanic swell on flows over an estuarine intertidal mudflat in San Francisco Bay Estuarine, Coastal and Shelf Science. 58: 541-554. DOI: 10.1016/S0272-7714(03)00132-X  1
2002 Stacey MT, Mead KS, Koehl MA. Molecule capture by olfactory antennules: mantis shrimp. Journal of Mathematical Biology. 44: 1-30. PMID 11942523 DOI: 10.1007/S002850100111  1
2002 Monismith SG, Kimmerer W, Burau JR, Stacey MT. Structure and flow-induced variability of the subtidal salinity field in northern San Francisco Bay Journal of Physical Oceanography. 32: 3003-3019. DOI: 10.1175/1520-0485(2002)032<3003:Safivo>2.0.Co;2  1
2001 Stacey MT, Burau JR, Monismith SG. Creation of residual flows in a partially stratified estuary Journal of Geophysical Research: Oceans. 106: 17013-17037. DOI: 10.1029/2000Jc000576  1
2001 Chan NY, Stacey MT, Smith AE, Ebi KL, Wilson TF. An empirical mechanistic framework for heat-related illness Climate Research. 16: 133-143.  1
2000 Stacey MT, Cowen EA, Powell TM, Dobbins E, Monismith SG, Koseff JR. Plume dispersion in a stratified, near-coastal flow: Measurements and modeling Continental Shelf Research. 20: 637-663. DOI: 10.1016/S0278-4343(99)00061-8  1
1999 Stacey MT, Monismith SG, Burau JR. Measurements of Reynolds stress profiles in unstratified tidal flow Journal of Geophysical Research: Oceans. 104: 10933-10949. DOI: 10.1029/1998Jc900095  1
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