Yogi Kurniawan, Ph.D. - Related publications

2013 Chemical Engineering University of Rhode Island, Providence, RI, United States 
Chemical Engineering, General Biophysics, Biochemistry
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Noell K, Pitula JS. A Dual Omics Approach to Evaluate Transcriptional and Metabolic Responses During Lipid Deprivation in an Oyster Parasite, . Omics : a Journal of Integrative Biology. 25: 93-101. PMID 33571063 DOI: 10.1089/omi.2020.0172   
2021 Anton N, Pierrat P, Brou GA, Gbassi GK, Omran Z, Lebeau L, Vandamme TF, Bouriat P. The pH-Induced Specific Area Changes of Unsaturated Lipids Deposited onto a Bubble Interface. Langmuir : the Acs Journal of Surfaces and Colloids. PMID 33577340 DOI: 10.1021/acs.langmuir.0c03046   
2021 Sepehri A, Nepal B, Lazaridis T. Lipid interactions of an actinoporin pore-forming oligomer. Biophysical Journal. PMID 33617834 DOI: 10.1016/j.bpj.2021.02.015   
2021 Lagoutte-Renosi J, Allemand F, Ramseyer C, Rabani V, Davani S. Influence of Antiplatelet Agents on the Lipid Composition of Platelet Plasma Membrane: A Lipidomics Approach with Ticagrelor and Its Active Metabolite. International Journal of Molecular Sciences. 22. PMID 33572690 DOI: 10.3390/ijms22031432   
2021 Tsuchida N, Takagi T, Takahashi H, Yoshihara T, Tobita S, Sonoyama M. Membrane properties of amacrocyclic tetraether bisphosphatidylcholine lipid: Effect of a single membrane-spanning polymethylene cross-linkage between two head groups of ditetradecylphosphatidylcholine membrane. Biochimica Et Biophysica Acta. Biomembranes. 183569. PMID 33549531 DOI: 10.1016/j.bbamem.2021.183569   
2021 Hicks A, Escobar CA, Cross TA, Zhou HX. Fuzzy Association of an Intrinsically Disordered Protein with Acidic Membranes. Jacs Au. 1: 66-78. PMID 33554215 DOI: 10.1021/jacsau.0c00039   
2021 Banerjee S, Lyubchenko YL. Topographically smooth and stable supported lipid bilayer for high-resolution AFM studies. Methods (San Diego, Calif.). PMID 33609699 DOI: 10.1016/j.ymeth.2021.02.010   
2021 Luna E, Kim S, Gao Y, Widmalm G, Im W. Influences of Lipid A Types on LPS Bilayer Properties. The Journal of Physical Chemistry. B. PMID 33600188 DOI: 10.1021/acs.jpcb.0c09144   
2021 Elkins MR, Bandara A, Pantelopulos GA, Straub JE, Hong M. Direct Observation of Cholesterol Dimers and Tetramers in Lipid Bilayers. The Journal of Physical Chemistry. B. PMID 33560844 DOI: 10.1021/acs.jpcb.0c10631   
2021 Ma X, Zhu X, Huang C, Li Z, Fan J. Molecular mechanisms underlying the role of the puckered surface in the biocompatibility of black phosphorus. Nanoscale. PMID 33565554 DOI: 10.1039/d0nr08480h   
2021 Ausili A, Rodríguez-González I, Torrecillas A, Teruel JA, Gómez-Fernández JC. Diethylstilbestrol Modifies the Structure of Model Membranes and Is Localized Close to the First Carbons of the Fatty Acyl Chains. Biomolecules. 11. PMID 33557377 DOI: 10.3390/biom11020220   
2021 Zhou Y, Ariotti N, Rae J, Liang H, Tillu V, Tee S, Bastiani M, Bademosi AT, Collins BM, Meunier FA, Hancock JF, Parton RG. Caveolin-1 and cavin1 act synergistically to generate a unique lipid environment in caveolae. The Journal of Cell Biology. 220. PMID 33496726 DOI: 10.1083/jcb.202005138   
2021 Malik A, Seeberger PH, Brezesinski G, Varon Silva D. Zwitterionic Character and Lipid Composition Determine the Behaviour of GPI Fragments in Monolayers. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. PMID 33586851 DOI: 10.1002/cphc.202100002   
2021 Enoki TA, Wu J, Heberle FA, Feigenson GW. Investigation of the domain line tension in asymmetric vesicles prepared via hemifusion. Biochimica Et Biophysica Acta. Biomembranes. 183586. PMID 33647248 DOI: 10.1016/j.bbamem.2021.183586   
2021 Barniol-Xicota M, Verhelst SHL. Lipidomic and in-gel analysis of maleic acid co-polymer nanodiscs reveals differences in composition of solubilized membranes. Communications Biology. 4: 218. PMID 33594255 DOI: 10.1038/s42003-021-01711-3   
2021 Shoaib N, Bashir M, Munir R, Rashid R, Zaidi N. Expression of lipid transport-associated genes in lipid-deprived cancer cells. Genes to Cells : Devoted to Molecular & Cellular Mechanisms. PMID 33569881 DOI: 10.1111/gtc.12838   
2021 Trevisan L, Kocsis I, Hunter CA. Redox switching of an artificial transmembrane signal transduction system. Chemical Communications (Cambridge, England). PMID 33616133 DOI: 10.1039/d0cc08322d   
2021 Manna M, Murarka RK. Polyunsaturated Fatty Acid Modulates Membrane-Bound Monomeric α-Synuclein by Modulating Membrane Microenvironment through Preferential Interactions. Acs Chemical Neuroscience. PMID 33538574 DOI: 10.1021/acschemneuro.0c00694   
2021 Liu Y, Zou G, Gao H. Domain Aggregation and Associated Pore Growth in Lipid Membranes. Acs Nano. PMID 33405893 DOI: 10.1021/acsnano.0c06057   
2021 Devasya RRP, Bassi AS. Effect of nitrate feeding strategies on lipid and biomass productivity in Fed batch cultures of Nannochloropsis gaditana. Biotechnology Progress. e3120. PMID 33389810 DOI: 10.1002/btpr.3120   
2021 Roppongi T, Mizuno N, Miyagawa Y, Kobayashi T, Nakagawa K, Adachi S. Solubility and mass transfer coefficient of oxygen through gas- and water-lipid interfaces. Journal of Food Science. PMID 33580513 DOI: 10.1111/1750-3841.15641   
2021 Rasouli A, Jamali Y, Tajkhorshid E, Bavi O, Pishkenari HN. Mechanical properties of ester- and ether-DPhPC bilayers: A molecular dynamics study. Journal of the Mechanical Behavior of Biomedical Materials. 117: 104386. PMID 33588213 DOI: 10.1016/j.jmbbm.2021.104386   
2021 Maiti A, Daschakraborty S. Effect of TMAO on the Structure and Phase Transition of Lipid Membranes: Potential Role of TMAO in Stabilizing Cell Membranes under Osmotic Stress. The Journal of Physical Chemistry. B. 125: 1167-1180. PMID 33481606 DOI: 10.1021/acs.jpcb.0c08335   
2021 Wood PL, Muir W, Christmann U, Gibbons P, Hancock CL, Poole CM, Emery AL, Poovey JR, Hagg C, Scarborough JH, Christopher JS, Dixon AT, Craney DJ. Lipidomics of the chicken egg yolk: high-resolution mass spectrometric characterization of nutritional lipid families. Poultry Science. 100: 887-899. PMID 33518142 DOI: 10.1016/j.psj.2020.11.020   
2021 Ripanti F, Di Venere A, Cestelli Guidi M, Romani M, Filabozzi A, Carbonaro M, Piro MC, Sinibaldi F, Nucara A, Mei G. The Puzzling Problem of Cardiolipin Membrane-Cytochrome c Interactions: A Combined Infrared and Fluorescence Study. International Journal of Molecular Sciences. 22. PMID 33572777 DOI: 10.3390/ijms22031334   
2021 Ripanti F, Di Venere A, Cestelli Guidi M, Romani M, Filabozzi A, Carbonaro M, Piro MC, Sinibaldi F, Nucara A, Mei G. The Puzzling Problem of Cardiolipin Membrane-Cytochrome c Interactions: A Combined Infrared and Fluorescence Study. International Journal of Molecular Sciences. 22. PMID 33572777 DOI: 10.3390/ijms22031334   
2021 Stieger B, Steiger J, Locher KP. Membrane lipids and transporter function. Biochimica Et Biophysica Acta. Molecular Basis of Disease. 1867: 166079. PMID 33476785 DOI: 10.1016/j.bbadis.2021.166079   
2021 Ma X, Zhang M, Gao Z, Gao M, Wu C, Wang Q. Microbial lipid production from banana straw hydrolysate and ethanol stillage. Environmental Science and Pollution Research International. PMID 33555465 DOI: 10.1007/s11356-021-12644-z   
2021 Santinho A, Chorlay A, Foret L, Thiam AR. Fat Inclusions Strongly Alter Membrane Mechanics. Biophysical Journal. PMID 33460598 DOI: 10.1016/j.bpj.2021.01.009   
2021 Herzog M, Li L, Blesken CC, Welsing G, Tiso T, Blank LM, Winter R. Impact of the number of rhamnose moieties of rhamnolipids on the structure, lateral organization and morphology of model biomembranes. Soft Matter. PMID 33621291 DOI: 10.1039/d0sm01934h   
2021 Wills RC, Pacheco J, Hammond GRV. Quantification of Genetically Encoded Lipid Biosensors. Methods in Molecular Biology (Clifton, N.J.). 2251: 55-72. PMID 33481231 DOI: 10.1007/978-1-0716-1142-5_4   
2021 Gupta R, Singh A, Srihari V, Ghosh SK. Ionic Liquid-Induced Phase-Separated Domains in Lipid Multilayers Probed by X-ray Scattering Studies. Acs Omega. 6: 4977-4987. PMID 33644605 DOI: 10.1021/acsomega.0c06014   
2021 Wang L, Liu J, Miao Z, Pan Q, Cao W. Lipid Droplets and Their Interactions with Other Organelles in Liver Diseases. The International Journal of Biochemistry & Cell Biology. 105937. PMID 33529713 DOI: 10.1016/j.biocel.2021.105937   
2021 Chaudhury A, Debnath K, Bu W, Jana NR, Basu JK. Penetration and preferential binding of charged nanoparticles to mixed lipid monolayers: interplay of lipid packing and charge density. Soft Matter. PMID 33427839 DOI: 10.1039/d0sm01945c   
2021 Chakraborty A, Kobzev E, Chan J, de Zoysa GH, Sarojini V, Piggot TJ, Allison JR. Molecular Dynamics Simulation of the Interaction of Two Linear Battacin Analogs with Model Gram-Positive and Gram-Negative Bacterial Cell Membranes. Acs Omega. 6: 388-400. PMID 33458490 DOI: 10.1021/acsomega.0c04752   
2021 Wu L, Courtney KC, Chapman ER. Cholesterol stabilizes recombinant exocytic fusion pores by altering membrane bending rigidity. Biophysical Journal. PMID 33582136 DOI: 10.1016/j.bpj.2021.02.005   
2021 Tapia J, Vera N, Aguilar J, González M, Sánchez SA, Coelho P, Saavedra C, Staforelli J. Correlated flickering of erythrocytes membrane observed with dual time resolved membrane fluctuation spectroscopy under different D-glucose concentrations. Scientific Reports. 11: 2429. PMID 33510337 DOI: 10.1038/s41598-021-82018-5   
2021 Kumar S, Chitraju C, Farese R, Walther T, Burd CG. Conditional targeting of phosphatidylserine decarboxylase to lipid droplets. Biology Open. PMID 33593792 DOI: 10.1242/bio.058516   
2021 Valentine ML, Waterland MK, Fathizadeh A, Elber R, Baiz CR. Interfacial Dynamics in Lipid Membranes: The Effects of Headgroup Structures. The Journal of Physical Chemistry. B. 125: 1343-1350. PMID 33507760 DOI: 10.1021/acs.jpcb.0c08755   
2021 Scheu M, Komorowski K, Shen C, Salditt T. A stalk fluid forming above the transition from the lamellar to the rhombohedral phase of lipid membranes. European Biophysics Journal : Ebj. PMID 33590276 DOI: 10.1007/s00249-020-01493-2   
2021 Sivaramakrishna D, Choudhury SK, Kumar CS, Swamy MJ. Structure, thermotropic phase behavior and membrane interaction of N-acyl-β-alaninols. Homologs of stress-combating N-acylethanolamines. Chemistry and Physics of Lipids. 105056. PMID 33631126 DOI: 10.1016/j.chemphyslip.2021.105056   
2021 Young RSE, Bowman AP, Williams ED, Tousignant KD, Bidgood CL, Narreddula VR, Gupta R, Marshall DL, Poad BLJ, Nelson CC, Ellis SR, Heeren RMA, Sadowski MC, Blanksby SJ. Apocryphal FADS2 activity promotes fatty acid diversification in cancer. Cell Reports. 34: 108738. PMID 33567271 DOI: 10.1016/j.celrep.2021.108738   
2021 Sistemich L, Stanchev LD, Kutsch M, Roux A, Günther Pomorski T, Herrmann C. Structural requirements for membrane binding of human guanylate-binding protein 1. The Febs Journal. PMID 33405388 DOI: 10.1111/febs.15703   
2021 Hogan P, Otero P, Murray P, Saha SK. Effect of biomass pre-treatment on supercritical CO extraction of lipids from marine diatom sp. and its biomass evaluation as bioethanol feedstock. Heliyon. 7: e05995. PMID 33511297 DOI: 10.1016/j.heliyon.2021.e05995   
2021 Biederman AM, O'Brien KM, Crockett EL. Homeoviscous adaptation occurs with thermal acclimation in biological membranes from heart and gill, but not the brain, in the Antarctic fish Notothenia coriiceps. Journal of Comparative Physiology. B, Biochemical, Systemic, and Environmental Physiology. PMID 33479792 DOI: 10.1007/s00360-020-01339-5   
2021 Kobos L, Ferreira CR, Sobreira TJP, Rajwa B, Shannahan J. A novel experimental workflow to determine the impact of storage parameters on the mass spectrometric profiling and assessment of representative phosphatidylethanolamine lipids in mouse tissues. Analytical and Bioanalytical Chemistry. PMID 33462657 DOI: 10.1007/s00216-020-03151-0   
2021 Buratta S, Shimanaka Y, Costanzi E, Ni S, Urbanelli L, Kono N, Morena F, Sagini K, Giovagnoli S, Romani R, Gargaro M, Arai H, Emiliani C. Lipotoxic stress alters the membrane lipid profile of extracellular vesicles released by Huh-7 hepatocarcinoma cells. Scientific Reports. 11: 4613. PMID 33633289 DOI: 10.1038/s41598-021-84268-9   
2021 Shiels K, Tsoupras A, Lordan R, Nasopoulou C, Zabetakis I, Murray P, Saha SK. Bioactive Lipids of Marine Microalga sp. SABC 012504 with Anti-Inflammatory and Anti-Thrombotic Activities. Marine Drugs. 19. PMID 33435162 DOI: 10.3390/md19010028   
2021 Banerjee S, Hashemi M, Zagorski K, Lyubchenko YL. Cholesterol in Membranes Facilitates Aggregation of Amyloid β Protein at Physiologically Relevant Concentrations. Acs Chemical Neuroscience. PMID 33492944 DOI: 10.1021/acschemneuro.0c00688   
2021 Kaur U, Lee JC. Membrane Interactions of α-Synuclein Probed by Neutrons and Photons. Accounts of Chemical Research. PMID 33415971 DOI: 10.1021/acs.accounts.0c00453