Shihkai Ni, Ph.D. - Publications

Affiliations: 
2014 Engineering and Applied Sciences University of Rochester, Rochester, NY 
Area:
Electronics and Electrical Engineering, Optics Physics, Electricity and Magnetism Physics

72 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any innacuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Zhu M, Xu K, Chen Y, Gu Y, Zhang M, Luo F, Liu Y, Gu W, Hu J, Xu H, Xie Z, Sun C, Li Y, Sun M, Xu X, ... ... Ni S, et al. Identification of Novel T1D Risk Loci and Their Association With Age and Islet Function at Diagnosis in Autoantibody-Positive T1D Individuals: Based on a Two-Stage Genome-Wide Association Study. Diabetes Care. PMID 31152121 DOI: 10.2337/dc18-2023  0.32
2019 Liu J, Huang Y, Huang X, Li C, Ni SW, Yu Y, Qin Q. Grouper DDX41 exerts antiviral activity against fish iridovirus and nodavirus infection. Fish & Shellfish Immunology. PMID 31082519 DOI: 10.1016/j.fsi.2019.05.019  0.32
2019 Guo C, Cai R, Cao X, Yang Y, Wang Q, He R, An L, Peng Z, Chen Y, Ni S, Tan X, Han J, Liu X, Lin L, Yu S, et al. Deep targeted sequencing reveals the diversity of TRB-CDR3 repertoire in patients with preeclampsia. Human Immunology. PMID 30965079 DOI: 10.1016/j.humimm.2019.04.003  0.32
2019 Gao B, Deng R, Chai Y, Chen H, Hu B, Wang X, Zhu S, Cao Y, Ni S, Wan M, Yang L, Luo Z, Cao X. Macrophage-lineage TRAP+ cells recruit periosteum-derived cells for periosteal osteogenesis and regeneration. The Journal of Clinical Investigation. 130. PMID 30946695 DOI: 10.1172/JCI98857  0.4
2019 Ni S, Li Z, Ying J, Zhang J, Chen H. Encoding a Novel Tetratricopeptide Repeat Domain-Containing Protein Is Involved in DNA Repair and Spikelet Number Determination in Rice. Genes. 10. PMID 30871267 DOI: 10.3390/genes10030214  0.56
2019 Guo J, Xu C, Ni S, Zhang S, Li Q, Zeng P, Pi G, Liu E, Sun DS, Liu Y, Wang Z, Chen H, Yang Y, Wang JZ. Elevation of pS262-Tau and Demethylated PP2A in Retina Occurs Earlier than in Hippocampus During Hyperhomocysteinemia. Journal of Alzheimer's Disease : Jad. PMID 30775994 DOI: 10.3233/JAD-180978  0.32
2019 Ni S, Huang H, He D, Chen H, Wang C, Zhao X, Chen X, Cui W, Zhou W, Zhang J. AAV-Mediated Overexpression of CRTC1 in the Hippocampal Dentate Gyrus Ameliorates Lipopolysaccharide-Induced Depression-Like Behaviour in Mice. Journal of Neurochemistry. PMID 30697736 DOI: 10.1111/jnc.14670  0.56
2019 Fu L, Wang C, Wang J, Ni S, Wang Y. Maillard reaction with ribose, galacto-oligosaccharide or chitosan-oligosaccharide reduced the allergenicity of shrimp tropomyosin by inducing conformational changes. Food Chemistry. 274: 789-795. PMID 30373009 DOI: 10.1016/j.foodchem.2018.09.068  0.4
2018 Wang L, Ni SW, Zhu KR, Zhou DY, Wang Y, Wang LL. [Changes in C-reactive protein and procalcitonin levels in neonates with necrotizing enterocolitis and their clinical significance]. Zhongguo Dang Dai Er Ke Za Zhi = Chinese Journal of Contemporary Pediatrics. 20: 825-830. PMID 30369357 DOI: 10.7499/j.issn.1008-8830.2018.10.008  0.4
2018 Yu Y, Jia Y, Shi Z, Chen Y, Ni S, Wang R, Tang Y, Gao Y. Enhanced Photochemical Vapor Generation for determination of Bismuth by Inductively Coupled Plasma Mass Spectrometry. Analytical Chemistry. PMID 30345736 DOI: 10.1021/acs.analchem.8b03681  0.32
2018 Ni SL, Zhang J, Liu X, Li XW, Sun YJ, Zhang X, Wang L, Lu JJ, Cui Y, Zheng CY, Han B, Sun HC. Effects of human bone morphogenetic protein 2 () on tertiary dentin formation. American Journal of Translational Research. 10: 2868-2876. PMID 30323873  0.56
2018 Huang YF, Niu WB, Hu R, Wang LJ, Huang ZY, Ni SH, Wang MQ, Yang Y, Huang YS, Feng WJ, Xiao W, Zhu DJ, Xian SX, Lu L. FIBP knockdown attenuates growth and enhances chemotherapy in colorectal cancer via regulating GSK3β-related pathways. Oncogenesis. 7: 77. PMID 30275459 DOI: 10.1038/s41389-018-0088-9  0.32
2018 Huang ZY, Wang LJ, Wang JJ, Feng WJ, Yang ZQ, Ni SH, Huang YS, Li H, Yang Y, Wang MQ, Hu R, Wan H, Wen CJ, Xian SX, Lu L. Hispaglabridin B, a liquorice extract discovered by a bioinformatics and machine learning approach, relieves protein-energy wasting by inhibiting FoxO1. British Journal of Pharmacology. PMID 30270561 DOI: 10.1111/bph.14508  0.32
2018 Guo J, Ni S, Li Q, Wang JZ, Yang Y. Folate/Vitamin B Alleviates Hyperhomocysteinemia-Induced Alzheimer-Like Pathologies in Rat Retina. Neuroscience Bulletin. PMID 30264378 DOI: 10.1007/s12264-018-0293-8  0.32
2018 Liu W, Zhang J, Yao X, Jiang C, Ni P, Cheng L, Liu J, Ni S, Chen Q, Li Q, Zhou K, Wang G, Zhou F. Bevacizumab enhanced antitumor effect of 5-FU via up-regulation of thymidine phosphorylase through VEGFA/VEGFR2-Sp1 pathway. Cancer Science. PMID 30151975 DOI: 10.1111/cas.13779  0.56
2018 Huang Y, Huang X, Wang S, Yu Y, Ni S, Qin Q. Soft-shelled turtle iridovirus enters cells via cholesterol-dependent, clathrin-mediated endocytosis as well as macropinocytosis. Archives of Virology. PMID 30066272 DOI: 10.1007/s00705-018-3966-8  0.32
2018 Ni S, Li C, Xu N, Liu X, Wang W, Chen W, Wang Y, van Wijnen AJ. Follistatin-like protein 1 induction of matrix metalloproteinase 1, 3 and 13 gene expression in rheumatoid arthritis synoviocytes requires MAPK, JAK/STAT3 and NF-κB pathways. Journal of Cellular Physiology. PMID 29932210 DOI: 10.1002/jcp.26580  0.4
2018 Zheng J, Ni S, Wang Y, Zhang B, Teng Y, Jiang S. Sex determination of Han adults in Northeast China using cone beam computer tomography. Forensic Science International. PMID 29929937 DOI: 10.1016/j.forsciint.2018.05.036  0.4
2018 Dai WF, Zhang JJ, Qiu QF, Chen J, Yang W, Ni S, Xiong JB. Starvation stress affects the interplay among shrimp gut microbiota, digestion and immune activities. Fish & Shellfish Immunology. PMID 29803665 DOI: 10.1016/j.fsi.2018.05.040  0.36
2018 Zhang T, Hu J, Wu J, Liu J, Ni S, Duan C. One-stage posterior debridement and fusion combined with irrigation and drainage for the treatment of postoperative lumbar spondylodiscitis. Acta Orthopaedica Et Traumatologica Turcica. PMID 29779968 DOI: 10.1016/j.aott.2018.04.004  0.32
2018 Feng L, He X, Chen J, Ni S, Jiang B, Hua JM. Complications in transorbital penetrating injury by bamboo branch: A case report. Medicine. 97: e0706. PMID 29742729 DOI: 10.1097/MD.0000000000010706  0.36
2018 Huang Y, Zhang S, Liu C, Lu H, Ni S, Cheng X, Long Z, Wang R. Transformations of 2-line ferrihydrite and its effect on cadmium adsorption. Environmental Science and Pollution Research International. PMID 29691744 DOI: 10.1007/s11356-018-1924-3  0.32
2018 Feng Z, Yuan J, He G, Hu W, Lin Z, Li D, Jiang X, Huang Y, Ni S, Li J, Zhu B, Dong X, Zhou F, Wang H, Zhao Z, et al. Tunable critical temperature for superconductivity in FeSe thin films by pulsed laser deposition. Scientific Reports. 8: 4039. PMID 29511227 DOI: 10.1038/s41598-018-22291-z  0.32
2018 Fu L, Wang J, Ni S, Wang C, Wang Y. Identification of allergenic epitopes and critical amino acids of major allergens in Chinese shrimp (Penaeus chinensis) by Immunoinformatics Coupled with Competitive-binding Strategy. Journal of Agricultural and Food Chemistry. PMID 29481756 DOI: 10.1021/acs.jafc.7b06042  0.4
2018 Meng L, Zhang Y, Zhou M, Zhang J, Zhou X, Ni S, Wu W. Unique Zigzag-Shaped Buckling Zn2C Monolayer with Strain-Tunable Band Gap and Negative Poisson Ratio. Inorganic Chemistry. PMID 29419290 DOI: 10.1021/acs.inorgchem.7b02867  0.56
2018 Ni S, Liu Y, Tang Y, Chen J, Li S, Pu J, Han L. GABAB receptor ligand-directed trimethyl chitosan/tripolyphosphate nanoparticles and their pMDI formulation for survivin siRNA pulmonary delivery. Carbohydrate Polymers. 179: 135-144. PMID 29111036 DOI: 10.1016/j.carbpol.2017.09.075  0.36
2017 Ge CH, Sun N, Kang Q, Ren LF, Ahmad HA, Ni SQ, Wang Z. Bacterial community evolutions driven by organic matter and powder activated carbon in simultaneous anammox and denitrification (SAD) process. Bioresource Technology. 251: 13-21. PMID 29257992 DOI: 10.1016/j.biortech.2017.12.017  0.4
2017 Liu J, Ni S. Association between genetic polymorphisms in the promoters of let-7 and risk of cervical squamous cell carcinoma. Gene. PMID 29154871 DOI: 10.1016/j.gene.2017.11.038  0.32
2017 Li J, Zhou C, Wang G, Wang S, Ni S, Ye M, Zhang J. Promoter hypermethylation of SLIT2 is a risk factor and potential diagnostic biomarker for nasopharyngeal carcinoma. Gene. PMID 29107007 DOI: 10.1016/j.gene.2017.10.059  0.56
2017 Ni S, Yu Y, Wei J, Zhou L, Wei S, Yan Y, Huang X, Huang Y, Qin Q. MicroRNA-146a promotes red spotted grouper nervous necrosis virus (RGNNV) replication by targeting TRAF6 in orange spotted grouper, Epinephelus coioides. Fish & Shellfish Immunology. PMID 29074132 DOI: 10.1016/j.fsi.2017.10.020  0.32
2017 Liu J, Huang X, Yu Y, Zhang J, Ni S, Hu Y, Huang Y, Qin Q. Fish DDX3X exerts antiviral function against grouper nervous necrosis virus infection. Fish & Shellfish Immunology. PMID 28964860 DOI: 10.1016/j.fsi.2017.09.068  0.56
2017 Ren LF, Lv L, Kang Q, Gao B, Ni SQ, Chen YH, Xu S. Microbial dynamics of biofilm and suspended flocs in anammox membrane bioreactor: The effect of non-woven fabric membrane. Bioresource Technology. 247: 259-266. PMID 28950134 DOI: 10.1016/j.biortech.2017.09.070  0.4
2017 Zhou X, Li J, Zhu Y, Ni S, Chen J, Feng X, Zhang Y, Li S, Zhu H, Wen Y. De novo Assembly of the Camellia nitidissima Transcriptome Reveals Key Genes of Flower Pigment Biosynthesis. Frontiers in Plant Science. 8: 1545. PMID 28936220 DOI: 10.3389/fpls.2017.01545  0.36
2017 Zhang J, Huang X, Ni S, Liu J, Hu Y, Yang Y, Yu Y, Zhou L, Qin Q, Huang Y. Grouper STAT1a is involved in antiviral immune response against iridovirus and nodavirus infection. Fish & Shellfish Immunology. PMID 28916355 DOI: 10.1016/j.fsi.2017.09.030  0.56
2017 Wu X, Shaikh AB, Yu Y, Li Y, Ni S, Lu A, Zhang G. Potential Diagnostic and Therapeutic Applications of Oligonucleotide Aptamers in Breast Cancer. International Journal of Molecular Sciences. 18. PMID 28841163 DOI: 10.3390/ijms18091851  0.32
2017 Huang Y, Zhang J, Liu J, Hu Y, Ni S, Yang Y, Yu Y, Huang X, Qin Q. Fish TRIM35 negatively regulates the interferon signaling pathway in response to grouper nodavirus infection. Fish & Shellfish Immunology. PMID 28823982 DOI: 10.1016/j.fsi.2017.08.019  0.56
2017 Chen D, Huang X, Zhou H, Luo H, Wang P, Chang Y, He X, Ni S, Shen Q, Cao G, Sun H, Wen X, Liu J. Discovery of pentacyclic triterpene 3β-ester derivatives as a new class of cholesterol ester transfer protein inhibitors. European Journal of Medicinal Chemistry. 139: 201-213. PMID 28802120 DOI: 10.1016/j.ejmech.2017.08.012  0.32
2017 Wang Y, Bu CN, Kang Q, Ahmad HA, Zhang J, Gao B, Ni SQ. Autoclaved sludge as the ideal seed to culture anammox bacteria: Reactor performance and microbial community diversity. Bioresource Technology. 244: 391-399. PMID 28783566 DOI: 10.1016/j.biortech.2017.07.161  0.56
2017 Bu C, Wang Y, Ge C, Ahmad HA, Gao B, Ni SQ. Dissimilatory Nitrate Reduction to Ammonium in the Yellow River Estuary: Rates, Abundance, and Community Diversity. Scientific Reports. 7: 6830. PMID 28754970 DOI: 10.1038/s41598-017-06404-8  0.4
2017 Zhou L, Li P, Ni S, Yu Y, Yang M, Wei S, Qin Q. Rapid and sensitive detection of redspotted grouper nervous necrosis virus (RGNNV) infection by aptamer-coat protein-aptamer sandwich enzyme-linked apta-sorbent assay (ELASA). Journal of Fish Diseases. PMID 28745819 DOI: 10.1111/jfd.12656  0.32
2017 Yu Y, Huang Y, Ni S, Zhou L, Liu J, Zhang J, Zhang X, Hu Y, Huang X, Qin Q. Singapore grouper iridovirus (SGIV) TNFR homolog VP51 functions as a virulence factor via modulating host inflammation response. Virology. PMID 28689858 DOI: 10.1016/j.virol.2017.06.025  0.56
2017 Weng W, Ni S, Wang Y, Xu M, Zhang Q, Yang Y, Wu Y, Xu Q, Qi P, Tan C, Huang D, Wei P, Huang Z, Ma Y, Zhang W, et al. PTTG3P promotes gastric tumour cell proliferation and invasion and is an indicator of poor prognosis. Journal of Cellular and Molecular Medicine. PMID 28631396 DOI: 10.1111/jcmm.13239  0.4
2017 Sun N, Ge C, Ahmad HA, Gao B, Ni SQ. Realization of microbial community stratification for single-stage nitrogen removal in a sequencing batch biofilter granular reactor. Bioresource Technology. 241: 681-691. PMID 28609756 DOI: 10.1016/j.biortech.2017.05.203  0.4
2017 Ni S, Yan Y, Cui H, Yu Y, Huang Y, Qin Q. Fish miR-146a promotes Singapore grouper iridovirus infection by regulating cell apoptosis and NF-κB activation. The Journal of General Virology. PMID 28590239 DOI: 10.1099/jgv.0.000811  0.32
2017 Hu D, Hu Y, Xu W, Yu H, Yang N, Ni S, Fu R. miR‑203 inhibits the expression of collagen‑related genes and the proliferation of hepatic stellate cells through a SMAD3‑dependent mechanism. Molecular Medicine Reports. PMID 28586069 DOI: 10.3892/mmr.2017.6702  0.32
2017 Wang Z, Liu X, Ni SQ, Zhang J, Zhang X, Ahmad HA, Gao B. Weak magnetic field: A powerful strategy to enhance partial nitrification. Water Research. 120: 190-198. PMID 28486170 DOI: 10.1016/j.watres.2017.04.058  0.56
2017 Li P, Zhou L, Wei S, Yang M, Ni S, Yu Y, Cai J, Qin Q. Establishment and characterization of a cell line from the head kidney of golden pompano Trachinotus ovatus and its application in toxicology and virus susceptibility. Journal of Fish Biology. PMID 28271507 DOI: 10.1111/jfb.13277  0.32
2017 Chen W, Yuan Y, Ni SF, Zhu Z, Zhang J, Jiang ZQ, Liao LS, Wong FL, Lee CS. Highly Efficient Deep-Blue Electroluminescence from a Charge-Transfer Emitter with Stable Donor Skeleton. Acs Applied Materials & Interfaces. PMID 28185447 DOI: 10.1021/acsami.6b14638  0.56
2017 Ni S, Xie Y, Tang Y, Liu Y, Chen J, Zhu S. N-2-hydroxypropyltimehyl ammonium chloride chitosan nanoparticles for siRNA pulmonary delivery: preparation, characterization and in vitro evaluation. Journal of Drug Targeting. 1-45. PMID 28110554 DOI: 10.1080/1061186X.2016.1278219  0.36
2016 Chen L, Ni S, Li M, Shen C, Lin Z, Ouyang Y, Xia F, Liang L, Jiang W, Ni R, Zhang J. High Expression of BCCIP β Can Promote Proliferation of Esophageal Squamous Cell Carcinoma. Digestive Diseases and Sciences. PMID 27995408 DOI: 10.1007/s10620-016-4382-0  0.56
2016 Zhou L, Li P, Liu J, Ni S, Yu Y, Yang M, Wei S, Qin Q. Establishment and characterization of a mid-kidney cell line derived from golden pompano Trachinotus ovatus, a new cell model for virus pathogenesis and toxicology studies. In Vitro Cellular & Developmental Biology. Animal. PMID 27981423 DOI: 10.1007/s11626-016-0112-3  0.32
2016 Cheng X, Huang Y, Long Z, Ni S, Shi Z, Zhang C. Characteristics, Sources and Health Risk Assessment of Trace Metals in PM10 in Panzhihua, China. Bulletin of Environmental Contamination and Toxicology. PMID 27872972 DOI: 10.1007/s00128-016-1979-0  0.32
2016 Du X, Xu MD, Wang Y, Weng WW, Wei P, Qi P, Zhang Q, Tan C, Ni S, Dong L, Yang Y, Lin W, Xu Q, Huang D, Huang Z, et al. A positive feedback loop of lncRNA-PVT1 and FOXM1 facilitates gastric cancer growth and invasion. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 27756785 DOI: 10.1158/1078-0432.CCR-16-0742  0.4
2016 Ni S, Chen L, Li M, Zhao W, Shan X, Wu M, Cheng J, Liang L, Wang Y, Jiang W, Zhang J, Ni R. PKC iota promotes cellular proliferation by accelerated G1/S transition via interaction with CDK7 in esophageal squamous cell carcinoma. Tumour Biology : the Journal of the International Society For Oncodevelopmental Biology and Medicine. PMID 27481515 DOI: 10.1007/s13277-016-5193-9  0.56
2016 Guo C, Wang Q, Cao X, Yang Y, Liu X, An L, Cai R, Du M, Wang G, Qiu Y, Peng Z, Han J, Ni S, Tan X, Jin L, et al. High-Throughput Sequencing Reveals Immunological Characteristics of the TRB-/IgH-CDR3 Region of Umbilical Cord Blood. The Journal of Pediatrics. PMID 27373756 DOI: 10.1016/j.jpeds.2016.05.078  0.32
2016 Ma X, Wang Q, Wang Y, Ma J, Wu N, Ni S, Luo T, Zhuang L, Chu C, Cho SW, Tsujimoto H, Qi Z. Chromosome aberrations induced by zebularine in triticale. Genome / National Research Council Canada = Genome / Conseil National De Recherches Canada. 1-8. PMID 27334255 DOI: 10.1139/gen-2016-0047  0.4
2016 Ren LF, Lv L, Zhang J, Gao B, Ni SQ, Yang N, Zhou Q, Liu X. Novel zero-valent iron-assembled reactor for strengthening anammox performance under low temperature. Applied Microbiology and Biotechnology. PMID 27229724 DOI: 10.1007/s00253-016-7586-5  0.56
2016 Xu Q, Chen J, Ni S, Tan C, Xu M, Dong L, Yuan L, Wang Q, Du X. Pan-cancer transcriptome analysis reveals a gene expression signature for the identification of tumor tissue origin. Modern Pathology : An Official Journal of the United States and Canadian Academy of Pathology, Inc. PMID 26990976 DOI: 10.1038/modpathol.2016.60  0.36
2015 Shi R, Ni S. Theory and Application Technology of Railway Intelligent Transportation Systems Icte 2015 - Proceedings of the 5th International Conference On Transportation Engineering. 626-632. DOI: 10.1061/9780784479384.081  0.56
2013 Lü M, Ni S. Passenger train stock scheduling in alternative periods between the new train diagram and the old one Zhongguo Tiedao Kexue/China Railway Science. 34: 99-104. DOI: 10.3969/j.issn.1001-4632.2013.04.17  0.56
2013 Li W, Ni S. General model and simulation research on passenger-dedicated line station based on TPr/T-S Xinan Jiaotong Daxue Xuebao/Journal of Southwest Jiaotong University. 48: 934-941. DOI: 10.3969/j.issn.0258-2724.2013.05.024  0.56
2013 Gao J, Ni S. System architecture and developing pattern of an rits-based system for freight transportation organization Icte 2013 - Proceedings of the 4th International Conference On Transportation Engineering. 1108-1116. DOI: 10.1061/9780784413159.161  0.56
2013 Ni S, Shi C. Equipment layout and optimization of railway container central station Icte 2013 - Proceedings of the 4th International Conference On Transportation Engineering. 337-343. DOI: 10.1061/9780784413159.049  0.56
2012 Chen D, Lv M, Ni S. Optimization model and algorithm for departure time domain of passenger trains based on conflicts detecting and node important degree Advanced Science Letters. 11: 722-725. DOI: 10.1166/asl.2012.2993  0.56
2010 Lu B, Ni S. A fuzzy approach based on vague sets for evaluating railway logistics center performance Iclem 2010: Logistics For Sustained Economic Development - Infrastructure, Information, Integration - Proceedings of the 2010 International Conference of Logistics Engineering and Management. 387: 3862-3870. DOI: 10.1061/41139(387)538  0.56
2010 Ni S, Gao B, Sung S. Performance of anaerobic ammonia oxidation (anammox): Effect of organic matter on granular sludge Proceedings of the 3rd International Conference On Environmental Technology and Knowledge Transfer. 578-584.  0.4
2009 Guo X, Ni S, Zhang J. Backtracking algorithms for implementation of railway crew schedule Proceedings of the 2nd International Conference On Transportation Engineering, Icte 2009. 4287-4292. DOI: 10.1061/41039(345)706  0.56
2009 Pan J, Ni S, Tian Z. The optimization model and algorithm for EMU routing of passenger dedicated line Proceedings of the 2nd International Conference On Transportation Engineering, Icte 2009. 1878-1883. DOI: 10.1061/41039(345)311  0.56
2008 Lu H, Ni S. Train operation and dispatching system for railway large-scale passenger station based on component technology Zhongguo Tiedao Kexue/China Railway Science. 29: 122-127.  0.56
2004 Ni S, Chen J, Zhang L. Supply chain information control mechanism based on distributed structure Jisuanji Gongcheng/Computer Engineering. 30: 19.  0.36
2004 Ni S, Chen J, Zhuge L. Theoretical and positive study on manufacturing supply chain modularity Zhongguo Jixie Gongcheng/China Mechanical Engineering. 15: 313.  0.36
1992 Li B, Yang Y, Ni S. Translational diffusion of atactic 1,2‐polybutadienes in tetrahydrofuran Journal of Applied Polymer Science. 46: 1691-1693. DOI: 10.1002/app.1992.070460918  0.32
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