Abdul Barakat - Publications

Affiliations: 
Mechanical and Aeronautical Engineering University of California, Davis, Davis, CA 
Area:
Biomedical Engineering, General Biophysics, Cell Biology

43 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Seo T, Lafont A, Choi SY, Barakat AI. Drug-Eluting Stent Design is a Determinant of Drug Concentration at the Endothelial Cell Surface. Annals of Biomedical Engineering. PMID 26821272 DOI: 10.1007/s10439-015-1531-0  0.64
2016 Gouget CL, Hwang Y, Barakat AI. Model of cellular mechanotransduction via actin stress fibers. Biomechanics and Modeling in Mechanobiology. 15: 331-44. PMID 26081725 DOI: 10.1007/s10237-015-0691-z  0.64
2015 Bozsak F, Gonzalez-Rodriguez D, Sternberger Z, Belitz P, Bewley T, Chomaz JM, Barakat AI. Optimization of Drug Delivery by Drug-Eluting Stents. Plos One. 10: e0130182. PMID 26083626 DOI: 10.1371/journal.pone.0130182  0.64
2014 Zimmer CC, Liu YX, Morgan JT, Yang G, Wang KH, Kennedy IM, Barakat AI, Liu GY. New approach to investigate the cytotoxicity of nanomaterials using single cell mechanics. The Journal of Physical Chemistry. B. 118: 1246-55. PMID 24417356 DOI: 10.1021/jp410764f  0.64
2013 Barakat AI, Gojova A. Role of Ion channels in cellular mechanotransduction - Lessons from the vascular endothelium Cellular Mechanotransduction: Diverse Perspectives From Molecules to Tissues. 161-180. DOI: 10.1017/CBO9781139195874.007  0.64
2013 Barakat AI. Blood flow and arterial endothelial dysfunction: Mechanisms and implications Comptes Rendus Physique. 14: 479-496. DOI: 10.1016/j.crhy.2013.05.003  0.64
2012 Hwang Y, Barakat AI. Dynamics of mechanical signal transmission through prestressed stress fibers. Plos One. 7: e35343. PMID 22514731 DOI: 10.1371/journal.pone.0035343  0.64
2012 Morgan JT, Wood JA, Shah NM, Hughbanks ML, Russell P, Barakat AI, Murphy CJ. Integration of basal topographic cues and apical shear stress in vascular endothelial cells. Biomaterials. 33: 4126-35. PMID 22417618 DOI: 10.1016/j.biomaterials.2012.02.047  0.64
2012 Wells MA, Abid A, Kennedy IM, Barakat AI. Serum proteins prevent aggregation of Fe2O3 and ZnO nanoparticles. Nanotoxicology. 6: 837-46. PMID 22149273 DOI: 10.3109/17435390.2011.625131  0.64
2012 Seo T, Barakat AI. Performance of various drug-eluting stent geometries measured using computational analysis Transactions of the Korean Society of Mechanical Engineers, B. 36: 601-607. DOI: 10.3795/KSME-B.2012.36.6.601  0.64
2011 Morgan JT, Pfeiffer ER, Thirkill TL, Kumar P, Peng G, Fridolfsson HN, Douglas GC, Starr DA, Barakat AI. Nesprin-3 regulates endothelial cell morphology, perinuclear cytoskeletal architecture, and flow-induced polarization. Molecular Biology of the Cell. 22: 4324-34. PMID 21937718 DOI: 10.1091/mbc.E11-04-0287  0.64
2011 Mazzag B, Barakat AI. The effect of noisy flow on endothelial cell mechanotransduction: a computational study. Annals of Biomedical Engineering. 39: 911-21. PMID 20963495 DOI: 10.1007/s10439-010-0181-5  0.64
2010 Choi HW, Barakat AI. Computational modeling of ATP/ADP concentration at the vascular surface Computational Modeling in Biomechanics. 49-67. DOI: 10.1007/978-90-481-3575-2_2  0.64
2009 Choi HW, Barakat AI. Modulation of ATP/ADP concentration at the endothelial cell surface by flow: effect of cell topography. Annals of Biomedical Engineering. 37: 2459-68. PMID 19763828 DOI: 10.1007/s10439-009-9793-z  0.64
2009 Gojova A, Lee JT, Jung HS, Guo B, Barakat AI, Kennedy IM. Effect of cerium oxide nanoparticles on inflammation in vascular endothelial cells. Inhalation Toxicology. 21: 123-30. PMID 19558244 DOI: 10.1080/08958370902942582  0.64
2009 Kennedy IM, Wilson D, Barakat AI. Uptake and inflammatory effects of nanoparticles in a human vascular endothelial cell line. Research Report (Health Effects Institute). 3-32. PMID 19552347  0.64
2008 Barakat AI. Dragging along: the glycocalyx and vascular endothelial cell mechanotransduction. Circulation Research. 102: 747-8. PMID 18403731 DOI: 10.1161/CIRCRESAHA.108.174839  0.64
2008 Cao TC, Thirkill TL, Wells M, Barakat AI, Douglas GC. Trophoblasts and shear stress induce an asymmetric distribution of icam-1 in uterine endothelial cells. American Journal of Reproductive Immunology (New York, N.Y. : 1989). 59: 167-81. PMID 18211542 DOI: 10.1111/j.1600-0897.2007.00542.x  0.64
2008 Tsou JK, Liu J, Barakat AI, Insana MF. Role of ultrasonic shear rate estimation errors in assessing inflammatory response and vascular risk. Ultrasound in Medicine & Biology. 34: 963-72. PMID 18207310 DOI: 10.1016/j.ultrasmedbio.2007.11.010  0.64
2008 Chang E, O'Donnell ME, Barakat AI. Shear stress and 17β-estradiol modulate cerebral microvascular endothelial Na-K-Cl cotransporter and Na/H exchanger protein levels American Journal of Physiology - Cell Physiology. 294: C363-C371. PMID 17959724 DOI: 10.1152/ajpcell.00045.2007  0.64
2007 Thirkill TL, Cao T, Stout M, Blankenship TN, Barakat A, Douglas GC. MUC1 is involved in trophoblast transendothelial migration. Biochimica Et Biophysica Acta. 1773: 1007-14. PMID 17509701 DOI: 10.1016/j.bbamcr.2007.04.006  0.64
2007 Gojova A, Guo B, Kota RS, Rutledge JC, Kennedy IM, Barakat AI. Induction of inflammation in vascular endothelial cells by metal oxide nanoparticles: effect of particle composition. Environmental Health Perspectives. 115: 403-9. PMID 17431490 DOI: 10.1289/ehp.8497  0.64
2007 Choi HW, Ferrara KW, Barakat AI. Modulation of ATP/ADP concentration at the endothelial surface by shear stress: effect of flow recirculation. Annals of Biomedical Engineering. 35: 505-16. PMID 17253149 DOI: 10.1007/s10439-006-9247-9  0.64
2007 Seo T, Barakat A. Numerical analysis on the effect of wall shear stress around the ring drug-eluting stent Transactions of the Korean Society of Mechanical Engineers, B. 31: 21-28.  0.64
2006 Gautam M, Shen Y, Thirkill TL, Douglas GC, Barakat AI. Flow-activated chloride channels in vascular endothelium. Shear stress sensitivity, desensitization dynamics, and physiological implications. The Journal of Biological Chemistry. 281: 36492-500. PMID 16973617 DOI: 10.1074/jbc.M605866200  0.64
2006 Barakat AI, Lieu DK, Gojova A. Secrets of the code: do vascular endothelial cells use ion channels to decipher complex flow signals? Biomaterials. 27: 671-8. PMID 16112724 DOI: 10.1016/j.biomaterials.2005.07.036  0.64
2005 Choi HW, Barakat AI. Numerical study of the impact of non-Newtonian blood behavior on flow over a two-dimensional backward facing step. Biorheology. 42: 493-509. PMID 16369086  0.64
2005 Thirkill TL, Lowe K, Vedagiri H, Blankenship TN, Barakat AI, Douglas GC. Macaque trophoblast migration is regulated by RANTES. Experimental Cell Research. 305: 355-64. PMID 15817160 DOI: 10.1016/j.yexcr.2005.01.013  0.64
2005 Soghomonians A, Barakat AI, Thirkill TL, Douglas GC. Trophoblast migration under flow is regulated by endothelial cells. Biology of Reproduction. 73: 14-9. PMID 15744025 DOI: 10.1095/biolreprod.104.036509  0.64
2005 Gojova A, Barakat AI. Vascular endothelial wound closure under shear stress: role of membrane fluidity and flow-sensitive ion channels. Journal of Applied Physiology (Bethesda, Md. : 1985). 98: 2355-62. PMID 15705727 DOI: 10.1152/japplphysiol.01136.2004  0.64
2004 Soghomonians A, Thirkill TL, Mariano NF, Barakat AI, Douglas GC. Effect of aqueous tobacco smoke extract and shear stress on PECAM-1 expression and cell motility in human uterine endothelial cells. Toxicological Sciences : An Official Journal of the Society of Toxicology. 81: 408-18. PMID 15240893 DOI: 10.1093/toxsci/kfh210  0.64
2004 Thirkill TL, Hendren SR, Soghomonians A, Mariano NF, Barakat AI, Douglas GC. Regulation of trophoblast beta1-integrin expression by contact with endothelial cells. Cell Communication and Signaling : Ccs. 2: 4. PMID 15189562 DOI: 10.1186/1478-811X-2-4  0.64
2004 Lieu DK, Pappone PA, Barakat AI. Differential membrane potential and ion current responses to different types of shear stress in vascular endothelial cells. American Journal of Physiology. Cell Physiology. 286: C1367-75. PMID 14761889 DOI: 10.1152/ajpcell.00243.2003  0.64
2004 Choi HW, Barakat AI. Modulation of ATP/ADP concentration at the endothelial surface by shear stress: Effect of flow disturbance Annual International Conference of the Ieee Engineering in Medicine and Biology - Proceedings. 26: 5065-5068.  0.64
2003 Barakat A, Lieu D. Differential responsiveness of vascular endothelial cells to different types of fluid mechanical shear stress. Cell Biochemistry and Biophysics. 38: 323-43. PMID 12794271 DOI: 10.1385/CBB:38:3:323  0.64
2003 Mazzag BM, Tamaresis JS, Barakat AI. A model for shear stress sensing and transmission in vascular endothelial cells. Biophysical Journal. 84: 4087-101. PMID 12770912 DOI: 10.1016/S0006-3495(03)75134-0  0.64
2002 Soghomonians A, Barakat AI, Thirkill TL, Blankenship TN, Douglas GC. Effect of shear stress on migration and integrin expression in macaque trophoblast cells. Biochimica Et Biophysica Acta. 1589: 233-46. PMID 12031791 DOI: 10.1016/S0167-4889(02)00179-9  0.64
2001 John K, Barakat AI. Modulation of ATP/ADP concentration at the endothelial surface by shear stress: Effect of flow-induced ATP release Annals of Biomedical Engineering. 29: 740-751. PMID 11599582 DOI: 10.1114/1.1397792  0.64
2001 Barakat AI. A model for shear stress-induced deformation of a flow sensor on the surface of vascular endothelial cells Journal of Theoretical Biology. 210: 221-236. PMID 11371176 DOI: 10.1006/jtbi.2001.2290  0.64
2001 Schachter LG, Barakat AI. Computational study of arterial flow disturbance induced by intravascular stents American Society of Mechanical Engineers, Bioengineering Division (Publication) Bed. 50: 877-878.  0.64
1999 Barakat AI. Responsiveness of vascular endothelium to shear stress: Potential role of ion channels and cellular cytoskeleton (Review) International Journal of Molecular Medicine. 4: 323-332. PMID 10493972  0.64
1998 Barakat AI, Davies PF. Mechanisms of shear stress transmission and transduction in endothelial cells Chest. 114. PMID 9676631  0.64
1997 Rutaganira T, Cheer A, Dwyer HA, Barakat A. Unsteady coupled fluid flow and elastic wall calculations for the aorta American Society of Mechanical Engineers, Bioengineering Division (Publication) Bed. 36: 109-110.  0.64
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