Patrick Charbonneau, Ph.D. - Publications

Affiliations: 
Chemistry Duke University, Durham, NC 
Area:
chemical physics, glass, soft condensed matter
Website:
http://www.chem.duke.edu/labs/charbonneau/

86 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Charbonneau P, Morse PK. Jamming, relaxation, and memory in a minimally structured glass former. Physical Review. E. 108: 054102. PMID 38115479 DOI: 10.1103/PhysRevE.108.054102  0.33
2022 Zheng M, Tarzia M, Charbonneau P. Communication: Weakening the critical dynamical slowing down of models with SALR interactions. The Journal of Chemical Physics. 157: 181103. PMID 36379807 DOI: 10.1063/5.0120634  0.379
2022 Folena G, Biroli G, Charbonneau P, Hu Y, Zamponi F. Equilibrium fluctuations in mean-field disordered models. Physical Review. E. 106: 024605. PMID 36109887 DOI: 10.1103/PhysRevE.106.024605  0.678
2022 Biroli G, Charbonneau P, Folena G, Hu Y, Zamponi F. Local Dynamical Heterogeneity in Simple Glass Formers. Physical Review Letters. 128: 175501. PMID 35570461 DOI: 10.1103/PhysRevLett.128.175501  0.679
2022 Charbonneau P, Hu Y, Kundu J, Morse PK. The dimensional evolution of structure and dynamics in hard sphere liquids. The Journal of Chemical Physics. 156: 134502. PMID 35395904 DOI: 10.1063/5.0080805  0.347
2021 Charbonneau P, Morse PK, Perkins W, Zamponi F. Three simple scenarios for high-dimensional sphere packings. Physical Review. E. 104: 064612. PMID 35030875 DOI: 10.1103/PhysRevE.104.064612  0.329
2021 Charbonneau B, Charbonneau P, Hu Y, Yang Z. High-dimensional percolation criticality and hints of mean-field-like caging of the random Lorentz gas. Physical Review. E. 104: 024137. PMID 34525662 DOI: 10.1103/PhysRevE.104.024137  0.336
2021 Biroli G, Charbonneau P, Hu Y, Ikeda H, Szamel G, Zamponi F. Mean-Field Caging in a Random Lorentz Gas. The Journal of Physical Chemistry. B. PMID 34096720 DOI: 10.1021/acs.jpcb.1c02067  0.313
2021 Biroli G, Charbonneau P, Corwin EI, Hu Y, Ikeda H, Szamel G, Zamponi F. Interplay between percolation and glassiness in the random Lorentz gas. Physical Review. E. 103: L030104. PMID 33862778 DOI: 10.1103/PhysRevE.103.L030104  0.419
2020 Berthier L, Charbonneau P, Kundu J. Finite Dimensional Vestige of Spinodal Criticality above the Dynamical Glass Transition. Physical Review Letters. 125: 108001. PMID 32955295 DOI: 10.1103/Physrevlett.125.108001  0.455
2020 Charbonneau P, Kundu J. Postponing the dynamical transition density using competing interactions Granular Matter. 22: 1-6. DOI: 10.1007/S10035-020-0998-Z  0.441
2019 Altan I, Charbonneau P. Correction to: Obtaining Soft Matter Models of Proteins and their Phase Behavior. Methods in Molecular Biology (Clifton, N.J.). 2039: C1. PMID 32607941 DOI: 10.1007/978-1-4939-9678-0_18  0.306
2019 Flenner E, Berthier L, Charbonneau P, Fullerton CJ. Front-Mediated Melting of Isotropic Ultrastable Glasses. Physical Review Letters. 123: 175501. PMID 31702270 DOI: 10.1103/Physrevlett.123.175501  0.403
2019 Altan I, Khan AR, James S, Quinn MK, McManus J, Charbonneau P. Using Schematic Models to Understand the Microscopic Basis for Inverted Solubility in γD-crystallin. The Journal of Physical Chemistry. B. PMID 31557434 DOI: 10.1021/Acs.Jpcb.9B07774  0.344
2019 Khan AR, James S, Quinn MK, Altan I, Charbonneau P, McManus JJ. Temperature-Dependent Interactions Explain Normal and Inverted Solubility in a γD-Crystallin Mutant. Biophysical Journal. PMID 31422822 DOI: 10.1016/J.Bpj.2019.07.019  0.333
2019 Altan I, Charbonneau P. Obtaining Soft Matter Models of Proteins and their Phase Behavior. Methods in Molecular Biology (Clifton, N.J.). 2039: 209-227. PMID 31342429 DOI: 10.1007/978-1-4939-9678-0_15  0.334
2019 Berthier L, Biroli G, Charbonneau P, Corwin EI, Franz S, Zamponi F. Gardner physics in amorphous solids and beyond. The Journal of Chemical Physics. 151: 010901. PMID 31272167 DOI: 10.1063/1.5097175  0.417
2019 Berthier L, Charbonneau P, Kundu J. Bypassing sluggishness: SWAP algorithm and glassiness in high dimensions. Physical Review. E. 99: 031301. PMID 30999459 DOI: 10.1103/Physreve.99.031301  0.406
2019 Berthier L, Charbonneau P, Ninarello A, Ozawa M, Yaida S. Zero-temperature glass transition in two dimensions. Nature Communications. 10: 1508. PMID 30944330 DOI: 10.1038/S41467-019-09512-3  0.45
2019 Charbonneau P, Hu Y, Raju A, Sethna JP, Yaida S. Morphology of renormalization-group flow for the de Almeida-Thouless-Gardner universality class. Physical Review. E. 99: 022132. PMID 30934357 DOI: 10.1103/Physreve.99.022132  0.397
2019 Biroli G, Charbonneau P, Hu Y. Dynamics around the site percolation threshold on high-dimensional hypercubic lattices. Physical Review. E. 99: 022118. PMID 30934351 DOI: 10.1103/Physreve.99.022118  0.435
2019 Charbonneau P, Corwin EI, Fu L, Tsekenis G, van der Naald M. Glassy, Gardner-like phenomenology in minimally polydisperse crystalline systems. Physical Review. E. 99: 020901. PMID 30934253 DOI: 10.1103/PhysRevE.99.020901  0.392
2018 Norman J, Sorrell EL, Hu Y, Siripurapu V, Garcia J, Bagwell J, Charbonneau P, Lubkin SR, Bagnat M. Tissue self-organization underlies morphogenesis of the notochord. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 373. PMID 30249771 DOI: 10.1098/Rstb.2017.0320  0.303
2018 Charbonneau B, Charbonneau P, Szamel G. A microscopic model of the Stokes-Einstein relation in arbitrary dimension. The Journal of Chemical Physics. 148: 224503. PMID 29907017 DOI: 10.1063/1.5029464  0.391
2018 Hu Y, Charbonneau P. Clustering and assembly dynamics of a one-dimensional microphase former. Soft Matter. PMID 29578236 DOI: 10.1039/C8Sm00315G  0.402
2018 Altan I, Fusco D, Afonine PV, Charbonneau P. Learning About Biomolecular Solvation from Water in Protein Crystals. The Journal of Physical Chemistry. B. PMID 29397724 DOI: 10.1021/Acs.Jpcb.7B09898  0.32
2018 Hu Y, Fu L, Charbonneau P. Correlation lengths in quasi-one-dimensional systems via transfer matrices Molecular Physics. 116: 3345-3354. DOI: 10.1080/00268976.2018.1479543  0.345
2017 Charbonneau P, Li YC, Pfister HD, Yaida S. Cycle-expansion method for the Lyapunov exponent, susceptibility, and higher moments. Physical Review. E. 96: 032129. PMID 29346975 DOI: 10.1103/Physreve.96.032129  0.424
2017 Berthier L, Charbonneau P, Coslovich D, Ninarello A, Ozawa M, Yaida S. Configurational entropy measurements in extremely supercooled liquids that break the glass ceiling. Proceedings of the National Academy of Sciences of the United States of America. 114: 11356-11361. PMID 29073056 DOI: 10.1073/Pnas.1706860114  0.427
2017 Zhuang Y, Charbonneau P. Communication: Microphase equilibrium and assembly dynamics. The Journal of Chemical Physics. 147: 091102. PMID 28886640 DOI: 10.1063/1.4996904  0.42
2017 Pham AT, Zhuang Y, Detwiler P, Socolar JES, Charbonneau P, Yellen BB. Phase diagram and aggregation dynamics of a monolayer of paramagnetic colloids. Physical Review. E. 95: 052607. PMID 28618506 DOI: 10.1103/Physreve.95.052607  0.384
2017 Charbonneau P, Yaida S. Nontrivial Critical Fixed Point for Replica-Symmetry-Breaking Transitions. Physical Review Letters. 118: 215701. PMID 28598669 DOI: 10.1103/Physrevlett.118.215701  0.458
2017 Fu L, Bian C, Shields CW, Cruz DF, López GP, Charbonneau P. Assembly of hard spheres in a cylinder: a computational and experimental study. Soft Matter. PMID 28405662 DOI: 10.1039/C7Sm00316A  0.406
2017 Charbonneau P, Kurchan J, Parisi G, Urbani P, Zamponi F. Glass and Jamming Transitions: From Exact Results to Finite-Dimensional Descriptions Annual Review of Condensed Matter Physics. 8: 265-288. DOI: 10.1146/Annurev-Conmatphys-031016-025334  0.458
2016 Yaida S, Berthier L, Charbonneau P, Tarjus G. Point-to-set lengths, local structure, and glassiness. Physical Review. E. 94: 032605. PMID 27739762 DOI: 10.1103/Physreve.94.032605  0.385
2016 Charbonneau P, Corwin EI, Parisi G, Poncet A, Zamponi F. Universal Non-Debye Scaling in the Density of States of Amorphous Solids. Physical Review Letters. 117: 045503. PMID 27494482 DOI: 10.1103/Physrevlett.117.045503  0.393
2016 Zhuang Y, Charbonneau P. Recent Advances in the Theory and Simulation of Model Colloidal Microphase Formers. The Journal of Physical Chemistry. B. PMID 27466702 DOI: 10.1021/Acs.Jpcb.6B05471  0.426
2016 Berthier L, Charbonneau P, Jin Y, Parisi G, Seoane B, Zamponi F. Growing timescales and lengthscales characterizing vibrations of amorphous solids. Proceedings of the National Academy of Sciences of the United States of America. PMID 27402768 DOI: 10.1073/Pnas.1607730113  0.406
2016 Zhuang Y, Charbonneau P. Equilibrium Phase Behavior of the Square-Well Linear Microphase-Forming Model. The Journal of Physical Chemistry. B. PMID 27117230 DOI: 10.1021/Acs.Jpcb.6B02167  0.387
2016 Zhuang Y, Zhang K, Charbonneau P. Equilibrium Phase Behavior of a Continuous-Space Microphase Former. Physical Review Letters. 116: 098301. PMID 26991204 DOI: 10.1103/Physrevlett.116.098301  0.461
2016 Tavarone R, Charbonneau P, Stark H. Kinetic Monte Carlo simulations for birefringence relaxation of photo-switchable molecules on a surface. The Journal of Chemical Physics. 144: 104703. PMID 26979700 DOI: 10.1063/1.4943393  0.384
2016 Fu L, Steinhardt W, Zhao H, Socolar JE, Charbonneau P. Hard sphere packings within cylinders. Soft Matter. PMID 26843132 DOI: 10.1039/C5Sm02875B  0.332
2016 Berthier L, Charbonneau P, Yaida S. Efficient measurement of point-to-set correlations and overlap fluctuations in glass-forming liquids. The Journal of Chemical Physics. 144: 024501. PMID 26772579 DOI: 10.1063/1.4939640  0.43
2016 Charbonneau P, Dyer E, Lee J, Yaida S. Linking dynamical heterogeneity to static amorphous order Journal of Statistical Mechanics: Theory and Experiment. 2016: 074004. DOI: 10.1088/1742-5468/2016/07/074004  0.425
2015 Owens CE, Shields CW, Cruz DF, Charbonneau P, López GP. Highly parallel acoustic assembly of microparticles into well-ordered colloidal crystallites. Soft Matter. PMID 26558940 DOI: 10.1039/C5Sm02348C  0.357
2015 Tavarone R, Charbonneau P, Stark H. Phase ordering of zig-zag and bow-shaped hard needles in two dimensions. The Journal of Chemical Physics. 143: 114505. PMID 26395717 DOI: 10.1063/1.4930886  0.41
2015 Charbonneau P, Jin Y, Parisi G, Rainone C, Seoane B, Zamponi F. Numerical detection of the Gardner transition in a mean-field glass former. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 92: 012316. PMID 26274170 DOI: 10.1103/Physreve.92.012316  0.459
2015 Fusco D, Charbonneau P. Soft matter perspective on protein crystal assembly. Colloids and Surfaces. B, Biointerfaces. PMID 26236019 DOI: 10.1016/J.Colsurfb.2015.07.023  0.31
2015 Jin Y, Charbonneau P. Dimensional study of the dynamical arrest in a random Lorentz gas. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 91: 042313. PMID 25974497 DOI: 10.1103/Physreve.91.042313  0.473
2015 Charbonneau P, Corwin EI, Parisi G, Zamponi F. Jamming criticality revealed by removing localized buckling excitations. Physical Review Letters. 114: 125504. PMID 25860759 DOI: 10.1103/Physrevlett.114.125504  0.422
2015 Yang Y, Fu L, Marcoux C, Socolar JE, Charbonneau P, Yellen BB. Phase transformations in binary colloidal monolayers. Soft Matter. 11: 2404-15. PMID 25677504 DOI: 10.1039/C5Sm00009B  0.419
2014 Charbonneau P, Jin Y, Parisi G, Zamponi F. Hopping and the Stokes-Einstein relation breakdown in simple glass formers. Proceedings of the National Academy of Sciences of the United States of America. 111: 15025-30. PMID 25288722 DOI: 10.1073/Pnas.1417182111  0.52
2014 Marcoux C, Byington TW, Qian Z, Charbonneau P, Socolar JE. Emergence of limit-periodic order in tiling models. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 90: 012136. PMID 25122280 DOI: 10.1103/Physreve.90.012136  0.415
2014 Fusco D, Barnum TJ, Bruno AE, Luft JR, Snell EH, Mukherjee S, Charbonneau P. Statistical analysis of crystallization database links protein physico-chemical features with crystallization mechanisms. Plos One. 9: e101123. PMID 24988076 DOI: 10.1371/Journal.Pone.0101123  0.314
2014 Charbonneau P, Kurchan J, Parisi G, Urbani P, Zamponi F. Fractal free energy landscapes in structural glasses. Nature Communications. 5: 3725. PMID 24759041 DOI: 10.1038/Ncomms4725  0.43
2014 Fusco D, Charbonneau P. Competition between monomeric and dimeric crystals in schematic models for globular proteins. The Journal of Physical Chemistry. B. 118: 8034-41. PMID 24684539 DOI: 10.1021/Jp5011428  0.357
2014 Fusco D, Headd JJ, De Simone A, Wang J, Charbonneau P. Characterizing protein crystal contacts and their role in crystallization: rubredoxin as a case study. Soft Matter. 10: 290-302. PMID 24489597 DOI: 10.1039/C3Sm52175C  0.373
2014 Charbonneau P, Kurchan J, Parisi G, Urbani P, Zamponi F. Exact theory of dense amorphous hard spheres in high dimension. III. the full replica symmetry breaking solution Journal of Statistical Mechanics: Theory and Experiment. 2014. DOI: 10.1088/1742-5468/2014/10/P10009  0.37
2013 Charbonneau B, Charbonneau P, Jin Y, Parisi G, Zamponi F. Dimensional dependence of the Stokes-Einstein relation and its violation. The Journal of Chemical Physics. 139: 164502. PMID 24182044 DOI: 10.1063/1.4825177  0.367
2013 Fusco D, Charbonneau P. Crystallization of asymmetric patchy models for globular proteins in solution. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 88: 012721. PMID 23944504 DOI: 10.1103/Physreve.88.012721  0.365
2013 Charbonneau P, Tarjus G. Decorrelation of the static and dynamic length scales in hard-sphere glass formers. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 87: 042305. PMID 23679412 DOI: 10.1103/Physreve.87.042305  0.441
2013 Charbonneau B, Charbonneau P, Tarjus G. Geometrical frustration and static correlations in hard-sphere glass formers. The Journal of Chemical Physics. 138: 12A515. PMID 23556766 DOI: 10.1063/1.4770498  0.426
2012 Charbonneau P, Corwin EI, Parisi G, Zamponi F. Universal microstructure and mechanical stability of jammed packings. Physical Review Letters. 109: 205501. PMID 23215504 DOI: 10.1103/Physrevlett.109.205501  0.35
2012 Zhang K, Charbonneau P. [N]pT ensemble and finite-size-scaling study of the critical isostructural transition in the generalized exponential model of index 4. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 86: 042501. PMID 23214631 DOI: 10.1103/Physreve.86.042501  0.472
2012 Charbonneau P, Ikeda A, Parisi G, Zamponi F. Dimensional study of the caging order parameter at the glass transition. Proceedings of the National Academy of Sciences of the United States of America. 109: 13939-43. PMID 22891303 DOI: 10.1073/Pnas.1211825109  0.469
2012 Zhang K, Charbonneau P. [N]pT Monte Carlo simulations of the cluster-crystal-forming penetrable sphere model. The Journal of Chemical Physics. 136: 214106. PMID 22697529 DOI: 10.1063/1.4723869  0.449
2012 Charbonneau B, Charbonneau P, Tarjus G. Geometrical frustration and static correlations in a simple glass former. Physical Review Letters. 108: 035701. PMID 22400759 DOI: 10.1103/Physrevlett.108.035701  0.454
2012 Zhang K, Charbonneau P. Erratum:[N]pTensemble and finite-size-scaling study of the critical isostructural transition in the generalized exponential model of index 4 [Phys. Rev. E86, 042501 (2012)] Physical Review E. 86. DOI: 10.1103/Physreve.86.069902  0.428
2012 Fusco D, Charbonneau P. Why Proteins Crystallize (or not): The Role of Non Specific Protein Interactions Biophysical Journal. 102: 268a-269a. DOI: 10.1016/J.Bpj.2011.11.1478  0.347
2011 Charbonneau P, Ikeda A, Parisi G, Zamponi F. Glass transition and random close packing above three dimensions. Physical Review Letters. 107: 185702. PMID 22107645 DOI: 10.1103/Physrevlett.107.185702  0.43
2011 Zhang K, Charbonneau P. Monte Carlo approach for studying microphases applied to the axial next-nearest-neighbor Ising and the Ising-Coulomb models Physical Review B - Condensed Matter and Materials Physics. 83. DOI: 10.1103/Physrevb.83.214303  0.486
2010 Zhang K, Charbonneau P, Mladek BM. Reentrant and isostructural transitions in a cluster-crystal former. Physical Review Letters. 105: 245701. PMID 21231534 DOI: 10.1103/Physrevlett.105.245701  0.454
2010 Jin Y, Charbonneau P, Meyer S, Song C, Zamponi F. Application of Edwards' statistical mechanics to high-dimensional jammed sphere packings. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 82: 051126. PMID 21230456 DOI: 10.1103/Physreve.82.051126  0.422
2010 Zhang K, Charbonneau P. Monte carlo study of the axial next-nearest-neighbor Ising model. Physical Review Letters. 104: 195703. PMID 20866979 DOI: 10.1103/Physrevlett.104.195703  0.469
2010 Charbonneau P, Ikeda A, van Meel JA, Miyazaki K. Numerical and theoretical study of a monodisperse hard-sphere glass former. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 81: 040501. PMID 20481668 DOI: 10.1103/Physreve.81.040501  0.486
2009 van Meel JA, Charbonneau B, Fortini A, Charbonneau P. Hard-sphere crystallization gets rarer with increasing dimension. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 80: 061110. PMID 20365121 DOI: 10.1103/Physreve.80.061110  0.323
2009 van Meel JA, Frenkel D, Charbonneau P. Geometrical frustration: a study of four-dimensional hard spheres. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 79: 030201. PMID 19391883 DOI: 10.1103/Physreve.79.030201  0.527
2008 Charbonneau P, Das C, Frenkel D. Dynamical heterogeneity in a glass-forming ideal gas. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 78: 011505. PMID 18763959 DOI: 10.1103/Physreve.78.011505  0.576
2008 Mladek BM, Charbonneau P, Likos CN, Frenkel D, Kahl G. Multiple occupancy crystals formed by purely repulsive soft particles Journal of Physics Condensed Matter. 20. DOI: 10.1088/0953-8984/20/49/494245  0.525
2007 Mladek BM, Charbonneau P, Frenkel D. Phase coexistence of cluster crystals: beyond the Gibbs phase rule. Physical Review Letters. 99: 235702. PMID 18233385 DOI: 10.1103/Physrevlett.99.235702  0.548
2007 Charbonneau P, Reichman DR. Dynamical heterogeneity and nonlinear susceptibility in supercooled liquids with short-range attraction. Physical Review Letters. 99: 135701. PMID 17930609 DOI: 10.1103/PhysRevLett.99.135701  0.566
2007 Charbonneau P, Reichman DR. Phase behavior and far-from-equilibrium gelation in charged attractive colloids. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 75: 050401. PMID 17677009 DOI: 10.1103/Physreve.75.050401  0.556
2007 Charbonneau P, Frenkel D. Gas-solid coexistence of adhesive spheres. The Journal of Chemical Physics. 126: 196101. PMID 17523839 DOI: 10.1063/1.2737051  0.464
2007 Charbonneau P, Reichman DR. Systematic characterization of thermodynamic and dynamical phase behavior in systems with short-ranged attraction. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 75: 011507. PMID 17358160 DOI: 10.1103/Physreve.75.011507  0.58
2004 Chamon C, Charbonneau P, Cugliandolo LF, Reichman DR, Sellitto M. Out-of-equilibrium dynamical fluctuations in glassy systems. The Journal of Chemical Physics. 121: 10120-37. PMID 15549887 DOI: 10.1063/1.1809585  0.62
2001 Spivey AC, Charbonneau P, Fekner T, Hochmuth DH, Maddaford A, Malardier-Jugroot C, Redgrave AJ, Whitehead MA. Energy barriers to rotation in axially chiral analogues of 4-(dimethylamino)pyridine. The Journal of Organic Chemistry. 66: 7394-401. PMID 11681954 DOI: 10.1021/Jo015593Q  0.305
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