David J. Clark - Publications

Affiliations: 
Stanford Medical School, Palo Alto, CA, United States 

225 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Xu Y, Wang Y, Höti N, Clark DJ, Chen SY, Zhang H. The next "sweet" spot for pancreatic ductal adenocarcinoma: Glycoprotein for early detection. Mass Spectrometry Reviews. e21748. PMID 34766650 DOI: 10.1002/mas.21748  0.056
2021 Cao L, Huang C, Cui Zhou D, Hu Y, Lih TM, Savage SR, Krug K, Clark DJ, Schnaubelt M, Chen L, da Veiga Leprevost F, Eguez RV, Yang W, Pan J, Wen B, et al. Proteogenomic characterization of pancreatic ductal adenocarcinoma. Cell. 184: 5031-5052.e26. PMID 34534465 DOI: 10.1016/j.cell.2021.08.023  0.058
2021 Zieren RC, Dong L, Clark DJ, Kuczler MD, Horie K, Moreno LF, Lih TM, Schnaubelt M, Vermeulen L, Zhang H, de Reijke TM, Pienta KJ, Amend SR. Defining candidate mRNA and protein EV biomarkers to discriminate ccRCC and pRCC from non-malignant renal cells in vitro. Medical Oncology (Northwood, London, England). 38: 105. PMID 34331598 DOI: 10.1007/s12032-021-01554-2  0.041
2021 Maxwell MJ, Arnold A, Sweeney H, Chen L, Lih TM, Schnaubelt M, Eberhart CG, Rubens JA, Zhang H, Clark DJ, Raabe EH. Unbiased proteomic and phosphoproteomic analysis identifies response signatures and novel susceptibilities after combined MEK and mTOR inhibition in BRAF mutant glioma. Molecular & Cellular Proteomics : McP. 100123. PMID 34298159 DOI: 10.1016/j.mcpro.2021.100123  0.063
2021 Murphy AC, Dinh D, Koshy AN, Lefkovits J, Clark DJ, Zaman S, Duffy SJ, Brennan A, Reid C, Yudi MB. Comparison of Long-Term Outcomes in Men versus Women Undergoing Percutaneous Coronary Intervention. The American Journal of Cardiology. PMID 34238448 DOI: 10.1016/j.amjcard.2021.05.013  0.074
2021 Savage HR, Santos VS, Edwards T, Giorgi E, Krishna S, Planche TD, Staines HM, Fitchett JRA, Kirwan DE, Cubas Atienzar AI, Clark DJ, Adams ER, Cuevas LE. Prevalence of neutralising antibodies against SARS-CoV-2 in acute infection and convalescence: A systematic review and meta-analysis. Plos Neglected Tropical Diseases. 15: e0009551. PMID 34237072 DOI: 10.1371/journal.pntd.0009551  0.033
2021 Chen SY, Clark DJ, Zhang H. High-Throughput Analyses of Glycans, Glycosites, and Intact Glycopeptides Using C4-and C18/MAX-Tips and Liquid Handling System. Current Protocols. 1: e186. PMID 34232571 DOI: 10.1002/cpz1.186  0.057
2021 Fettrow T, Hupfeld K, Tays G, Clark DJ, Reuter-Lorenz PA, Seidler RD. Brain activity during walking in older adults: Implications for compensatory versus dysfunctional accounts. Neurobiology of Aging. 105: 349-364. PMID 34182403 DOI: 10.1016/j.neurobiolaging.2021.05.015  0.05
2021 Scully TG, Toner L, Yeoh J, Farouque O, Yudi MB, Horrigan M, Clark DJ. Safety and Long-Term Clinical Outcomes of Fractional Flow Reserve Guided Coronary Revascularisation. Heart, Lung & Circulation. PMID 33781698 DOI: 10.1016/j.hlc.2021.02.009  0.056
2021 Clark DJ, Rose DK, Butera KA, Hoisington B, DeMark L, Chatterjee SA, Hawkins KA, Otzel DM, Skinner JW, Christou EA, Wu SS, Fox EJ. Rehabilitation with accurate adaptability walking tasks or steady state walking: A randomized clinical trial in adults post-stroke. Clinical Rehabilitation. 2692155211001682. PMID 33722075 DOI: 10.1177/02692155211001682  0.049
2021 Biswas S, Dinh D, Andrianopoulos N, Lefkovits J, Ajani A, Duffy SJ, Chan W, Walton A, Brennan A, Clark DJ, Hiew C, Oqueli E, Reid CM, Stub D, Eccleston D. Comparison of Long-Term Outcomes After Percutaneous Coronary Intervention in Patients With Insulin-Treated vs. Non-Insulin Treated Diabetes Mellitus. The American Journal of Cardiology. PMID 33667454 DOI: 10.1016/j.amjcard.2021.02.025  0.071
2021 Kunniardy P, Koshy AN, Meehan G, Murphy AC, Ramchand J, Clark DJ, Farouque O, Yudi MB. Invasive versus Conservative Management in Patients ≥85 years presenting with Non-ST Elevation Myocardial Infarction. Internal Medicine Journal. PMID 33647172 DOI: 10.1111/imj.15258  0.072
2021 Eriksson PR, Clark DJ. The yeast ISW1b ATP-dependent chromatin remodeler is critical for nucleosome spacing and dinucleosome resolution. Scientific Reports. 11: 4195. PMID 33602956 DOI: 10.1038/s41598-021-82842-9  0.059
2021 Bansal K, Clark DJ, Fox EJ, Rose DK. Does falls efficacy influence the relationship between forward and backward walking speed after stroke? Physical Therapy. PMID 33561276 DOI: 10.1093/ptj/pzab050  0.039
2021 Dagan M, Dinh DT, Stehli J, Tan C, Brennan A, Warren J, Ajani AE, Freeman M, Murphy A, Reid CM, Hiew C, Oqueli E, Clark DJ, Duffy SJ. Sex Disparity In Secondary Prevention Pharmacotherapy And Clinical Outcomes Following Acute Coronary Syndrome. European Heart Journal. Quality of Care & Clinical Outcomes. PMID 33537698 DOI: 10.1093/ehjqcco/qcab007  0.085
2021 Marr LT, Ocampo J, Clark DJ, Hayes JJ. Global histone protein surface accessibility in yeast indicates a uniformly loosely packed genome with canonical nucleosomes. Epigenetics & Chromatin. 14: 5. PMID 33430969 DOI: 10.1186/s13072-020-00381-5  0.047
2021 Huang C, Chen L, Savage SR, Eguez RV, Dou Y, Li Y, da Veiga Leprevost F, Jaehnig EJ, Lei JT, Wen B, Schnaubelt M, Krug K, Song X, Cieślik M, Chang HY, ... ... Clark DJ, et al. Proteogenomic insights into the biology and treatment of HPV-negative head and neck squamous cell carcinoma. Cancer Cell. PMID 33417831 DOI: 10.1016/j.ccell.2020.12.007  0.05
2020 Qiu H, Biernat E, Govind CK, Rawal Y, Chereji RV, Clark DJ, Hinnebusch AG. Chromatin remodeler Ino80C acts independently of H2A.Z to evict promoter nucleosomes and stimulate transcription of highly expressed genes in yeast. Nucleic Acids Research. PMID 33290553 DOI: 10.1093/nar/gkaa1212  0.057
2020 Omair M, Koshy AN, Dinh DT, Brennan AL, Reid CM, Ajani AE, Duffy SJ, Farouque O, Yudi MB, Clark DJ. Comparison of Long-Term Mortality in Patients with Single Coronary Narrowing and Diabetes Mellitus to that of Patients with Multi-Vessel Coronary Narrowing without Diabetes Mellitus. The American Journal of Cardiology. PMID 33285090 DOI: 10.1016/j.amjcard.2020.11.036  0.063
2020 Staines HM, Kirwan DE, Clark DJ, Adams ER, Augustin Y, Byrne RL, Cocozza M, Cubas-Atienzar AI, Cuevas LE, Cusinato M, Davies BMO, Davis M, Davis P, Duvoix A, Eckersley NM, et al. IgG Seroconversion and Pathophysiology in Severe Acute Respiratory Syndrome Coronavirus 2 Infection. Emerging Infectious Diseases. 27. PMID 33256890 DOI: 10.3201/eid2701.203074  0.07
2020 Anton SD, Cruz-Almeida Y, Singh A, Alpert J, Bensadon B, Cabrera M, Clark DJ, Ebner NC, Esser KA, Fillingim RB, Goicolea SM, Han SM, Kallas H, Johnson A, Leeuwenburgh C, et al. Innovations in Geroscience to enhance mobility in older adults. Experimental Gerontology. 142: 111123. PMID 33191210 DOI: 10.1016/j.exger.2020.111123  0.086
2020 Hu Y, Pan J, Shah P, Ao M, Thomas SN, Liu Y, Chen L, Schnaubelt M, Clark DJ, Rodriguez H, Boja ES, Hiltke T, Kinsinger CR, Rodland KD, Li QK, et al. Integrated Proteomic and Glycoproteomic Characterization of Human High-Grade Serous Ovarian Carcinoma. Cell Reports. 33: 108276. PMID 33086064 DOI: 10.1016/j.celrep.2020.108276  0.052
2020 Chatterjee SA, Seidler RD, Skinner JW, Lysne PE, Sumonthee C, Wu SS, Cohen RA, Rose DK, Woods AJ, Clark DJ. Obstacle Negotiation in Older Adults: Prefrontal Activation Interpreted Through Conceptual Models of Brain Aging. Innovation in Aging. 4: igaa034. PMID 32995566 DOI: 10.1093/Geroni/Igaa034  0.052
2020 Yudi MB, Clark DJ, Tsang D, Jelinek M, Kalten K, Joshi S, Phan K, Ramchand J, Nasis A, Amerena J, Koshy AN, Murphy AC, Arunothayaraj S, Si S, Reid C, et al. SMARTphone-based, early cardiac REHABilitation in patients with acute coronary syndromes: a randomized controlled trial. Coronary Artery Disease. PMID 32868661 DOI: 10.1097/MCA.0000000000000938  0.087
2020 Clark DJ, Chatterjee SA, Skinner JW, Lysne PE, Sumonthee C, Wu SS, Cohen RA, Rose DK, Woods AJ. Combining Frontal Transcranial Direct Current Stimulation With Walking Rehabilitation to Enhance Mobility and Executive Function: A Pilot Clinical Trial. Neuromodulation : Journal of the International Neuromodulation Society. PMID 32808403 DOI: 10.1111/Ner.13250  0.067
2020 Clark DJ, Zhang H. Proteomic approaches for characterizing renal cell carcinoma. Clinical Proteomics. 17: 28. PMID 32742246 DOI: 10.1186/s12014-020-09291-w  0.052
2020 Theodros D, Murter BM, Sidhom JW, Nirschl TR, Clark DJ, Chen L, Tam A, Blosser RL, Schwen ZR, Johnson MH, Pierorazio PM, Zhang H, Ganguly S, Pardoll DM, Zarif JC. High-Dimensional Cytometry (ExCYT) and Mass Spectrometry of myeloid infiltrate in clinically localized clear cell Renal Cell Carcinoma identifies novel potential myeloid targets for immunotherapy. Molecular & Cellular Proteomics : McP. PMID 32737216 DOI: 10.1074/Mcp.Ra120.002049  0.067
2020 Prajapati HK, Ocampo J, Clark DJ. Interplay among ATP-Dependent Chromatin Remodelers Determines Chromatin Organisation in Yeast. Biology. 9. PMID 32722483 DOI: 10.3390/biology9080190  0.067
2020 Qiu H, Biernat E, Govind CK, Rawal Y, Chereji RV, Clark DJ, Hinnebusch AG. Chromatin remodeler Ino80C acts independently of H2A.Z to evict promoter nucleosomes and stimulate transcription of highly expressed genes in yeast. Nucleic Acids Research. PMID 32663283 DOI: 10.1093/Nar/Gkaa571  0.073
2020 Stewart AN, Little HC, Clark DJ, Zhang H, Wong GW. Protein modifications critical for myonectin/erythroferrone secretion and oligomer assembly. Biochemistry. PMID 32602701 DOI: 10.1021/acs.biochem.0c00461  0.055
2020 Clark DJ, Schnaubelt M, Höti N, Hu Y, Zhou Y, Gooya M, Zhang H. Impact of Increased FUT8 Expression on the Extracellular Vesicle Proteome in Prostate Cancer Cells. Journal of Proteome Research. PMID 32378902 DOI: 10.1021/acs.jproteome.9b00578  0.056
2020 Eisenstatt JR, Boeckmann L, Au WC, Garcia V, Bursch L, Ocampo J, Costanzo M, Weinreich M, Sclafani RA, Baryshnikova A, Myers CL, Boone C, Clark DJ, Baker R, Basrai MA. Dbf4-Dependent Kinase (DDK)-Mediated Proteolysis of CENP-A Prevents Mislocalization of CENP-A in . G3 (Bethesda, Md.). PMID 32295767 DOI: 10.1534/G3.120.401131  0.063
2020 Dawson LP, Cole JA, Lancefield TF, Ajani AE, Andrianopoulos N, Thrift AG, Clark DJ, Brennan AL, Freeman M, O'Brien J, Sebastian M, Chan W, Shaw JA, Dinh D, Reid CM, et al. Incidence and risk factors for stroke following percutaneous coronary intervention. International Journal of Stroke : Official Journal of the International Stroke Society. 1747493020912607. PMID 32248767 DOI: 10.1177/1747493020912607  0.051
2020 Fan L, Xu S, Zhang F, Cui X, Fazli L, Gleave M, Clark DJ, Yang A, Hussain A, Rassool F, Qi J. Histone demethylase JMJD1A promotes expression of DNA repair factors and radio-resistance of prostate cancer cells. Cell Death & Disease. 11: 214. PMID 32238799 DOI: 10.1038/S41419-020-2405-4  0.061
2020 Clark DJ, Manini TM, Ferris DP, Hass CJ, Brumback BA, Cruz-Almeida Y, Pahor M, Reuter-Lorenz PA, Seidler RD. Corrigendum: Multimodal Imaging of Brain Activity to Investigate Walking and Mobility Decline in Older Adults (Mind in Motion Study): Hypothesis, Theory, and Methods. Frontiers in Aging Neuroscience. 12: 63. PMID 32194394 DOI: 10.3389/fnagi.2020.00063  0.036
2020 Yeoh J, Andrianopoulos N, Reid CM, Yudi MB, Hamilton G, Freeman M, Noaman S, Oqueli E, Picardo S, Brennan A, Chan W, Stub D, Duffy S, Farouque O, Ajani A, ... Clark DJ, et al. Long-term outcomes following percutaneous coronary intervention to an unprotected left main coronary artery in cardiogenic shock. International Journal of Cardiology. PMID 32192748 DOI: 10.1016/j.ijcard.2020.03.005  0.054
2020 Griswold DP, Khan AA, Chao TE, Clark DJ, Budohoski K, Devi BI, Azad TD, Grant GA, Trivedi RA, Rubiano AM, Johnson WD, Park KB, Broekman M, Servadei F, Hutchinson PJ, et al. Neurosurgical Randomized Trials in Low- and Middle-Income Countries. Neurosurgery. PMID 32171011 DOI: 10.1093/neuros/nyaa049  0.03
2020 Cho KC, Clark DJ, Schnaubelt M, Teo GC, Leprevost FDV, Bocik W, Boja E, Hiltke T, Nesvizhskii A, Zhang H. Deep Proteomics using Two Dimensional Data Independent Acquisition Mass Spectrometry. Analytical Chemistry. PMID 32058701 DOI: 10.1021/Acs.Analchem.9B04418  0.059
2020 Au WC, Zhang T, Mishra PK, Eisenstatt JR, Walker RL, Ocampo J, Dawson A, Warren J, Costanzo M, Baryshnikova A, Flick K, Clark DJ, Meltzer PS, Baker RE, Myers C, et al. Skp, Cullin, F-box (SCF)-Met30 and SCF-Cdc4-Mediated Proteolysis of CENP-A Prevents Mislocalization of CENP-A for Chromosomal Stability in Budding Yeast. Plos Genetics. 16: e1008597. PMID 32032354 DOI: 10.1371/Journal.Pgen.1008597  0.065
2020 Koshy AN, Gow PJ, Han HC, Teh AW, Jones R, Testro A, Lim HS, McCaughan G, Jeffrey GP, Crawford M, Macdonald G, Fawcett J, Wigg A, Chen JWC, Gane EJ, ... ... Clark DJ, et al. Cardiovascular Mortality following Liver Transplantation: Predictors and Temporal Trends over 30 years. European Heart Journal. Quality of Care & Clinical Outcomes. PMID 32011663 DOI: 10.1093/ehjqcco/qcaa009  0.021
2020 Yudi MB, Farouque O, Andrianopoulos N, Ajani AE, Brennan A, Murphy AC, Lefkovits J, Reid CM, Oqueli E, Sebastian M, Duffy SJ, Clark DJ. Prognostic Significance of Suboptimal Secondary Prevention Pharmacotherapy After Acute Coronary Syndromes. Internal Medicine Journal. PMID 31943665 DOI: 10.1111/imj.14750  0.081
2020 Clark DJ, Dhanasekaran SM, Petralia F, Pan J, Song X, Hu Y, da Veiga Leprevost F, Reva B, Lih TM, Chang HY, Ma W, Huang C, Ricketts CJ, Chen L, Krek A, et al. Integrated Proteogenomic Characterization of Clear Cell Renal Cell Carcinoma. Cell. 180: 207. PMID 31923397 DOI: 10.1016/j.cell.2019.12.026  0.018
2019 Clark DJ, Manini TM, Ferris DP, Hass CJ, Brumback BA, Cruz-Almeida Y, Pahor M, Reuter-Lorenz PA, Seidler RD. Multimodal Imaging of Brain Activity to Investigate Walking and Mobility Decline in Older Adults (Mind in Motion Study): Hypothesis, Theory, and Methods. Frontiers in Aging Neuroscience. 11: 358. PMID 31969814 DOI: 10.3389/Fnagi.2019.00358  0.076
2019 Foo CY, Andrianopoulos N, Brennan A, Ajani A, Reid CM, Duffy SJ, Clark DJ, Reidpath DD, Chaiyakunapruk N. Re-examining the effect of door-to-balloon delay on STEMI outcomes in the context of unmeasured confounders: a retrospective cohort study. Scientific Reports. 9: 19978. PMID 31882674 DOI: 10.1038/s41598-019-56353-7  0.071
2019 Ariyaratne TV, Ademi Z, Ofori-Asenso R, Huq MM, Duffy SJ, Yan BP, Ajani AE, Clark DJ, Billah B, Brennan AL, New G, Andrianopoulos N, Reid CM. The cost-effectiveness of guideline-driven use of drug-eluting stents: propensity-score matched analysis of a seven-year multicentre experience. Current Medical Research and Opinion. 1. PMID 31870180 DOI: 10.1080/03007995.2019.1708288  0.066
2019 Chen SY, Dong M, Yang G, Zhou Y, Clark DJ, Lih TM, Schnaubelt M, Liu Z, Zhang H. Glycans, Glycosite, and Intact Glycopeptide Analysis of N-linked glycoproteins Using Liquid Handling Systems. Analytical Chemistry. PMID 31859482 DOI: 10.1021/acs.analchem.9b03761  0.055
2019 Marr L, Clark DJ, Hayes JJ. A method for assessing histone surface accessibility genome-wide. Methods (San Diego, Calif.). PMID 31830524 DOI: 10.1016/J.Ymeth.2019.12.002  0.067
2019 Clark DJ, Moore CM, Flanagan M, Bocxlaer KV, Piperaki ET, Yardley V, Croft SL, Tyson J, Whitehouse SP, O'Halloran J, Krishna S, Staines HM. An efficient and novel technology for the extraction of parasite genomic DNA from whole blood or culture. Biotechniques. PMID 31774301 DOI: 10.2144/btn-2019-0086  0.031
2019 Gellatly RM, Connell C, Tan C, Andrianopoulos N, Ajani AE, Clark DJ, Nanayakkara S, Sebastian M, Brennan A, Freeman M, O'Brien J, Selkrig LA, Reid CM, Duffy SJ. Trends of Use and Outcomes Associated With Glycoprotein-IIb/IIIa Inhibitors in Patients With Acute Coronary Syndromes Undergoing Percutaneous Coronary Intervention. The Annals of Pharmacotherapy. 1060028019889550. PMID 31766865 DOI: 10.1177/1060028019889550  0.096
2019 Layard Horsfall H, Mohan M, Devi BI, Adeleye AO, Shukla DP, Bhat D, Khan M, Clark DJ, Chari A, Servadei F, Khan T, Rubiano AM, Hutchinson PJ, Kolias AG. Hinge/floating craniotomy as an alternative technique for cerebral decompression: a scoping review. Neurosurgical Review. PMID 31712994 DOI: 10.1007/s10143-019-01180-7  0.073
2019 Clark DJ, Dhanasekaran SM, Petralia F, Pan J, Song X, Hu Y, da Veiga Leprevost F, Reva B, Lih TM, Chang HY, Ma W, Huang C, Ricketts CJ, Chen L, Krek A, et al. Integrated Proteogenomic Characterization of Clear Cell Renal Cell Carcinoma. Cell. 179: 964-983.e31. PMID 31675502 DOI: 10.1016/J.Cell.2019.10.007  0.065
2019 Biswas S, Andrianopoulos N, Dinh D, Duffy SJ, Lefkovits J, Brennan A, Noaman S, Ajani A, Clark DJ, Freeman M, Oqueli E, Hiew C, Reid CM, Stub D, Chan W. Association of Body Mass Index and Extreme Obesity With Long-Term Outcomes Following Percutaneous Coronary Intervention. Journal of the American Heart Association. 8: e012860. PMID 31648578 DOI: 10.1161/JAHA.119.012860  0.045
2019 Clark SC, Chereji RV, Lee PR, Fields RD, Clark DJ. Differential Nucleosome Spacing in Neurons and Glia. Neuroscience Letters. 134559. PMID 31639421 DOI: 10.1016/j.neulet.2019.134559  0.06
2019 Solla DJF, Quadros DG, Kolias AG, Clark DJ, Hutchinson PJ, Teixeira MJ, Andrade AF, Paiva WS. Emergency neurosurgery for traumatic brain injury: the need for a national and international registry study. Revista Da Associacao Medica Brasileira (1992). 65: 1035-1036. PMID 31531597 DOI: 10.1590/1806-9282.65.8.1035  0.036
2019 Murphy AC, Yudi MB, Farouque O, Dinh D, Duffy SJ, Brennan A, Reid CM, Andrianopoulos N, Koshy AN, Martin L, Dagan M, Freeman M, Blusztein D, Ajani AE, Clark DJ, et al. Impact of Gender and Door-to-Balloon Times on Long-Term Mortality in Patients Presenting With ST-Elevation Myocardial Infarction. The American Journal of Cardiology. PMID 31327488 DOI: 10.1016/j.amjcard.2019.06.008  0.077
2019 Chatterjee SA, Fox EJ, Daly JJ, Rose DK, Wu SS, Christou EA, Hawkins KA, Otzel DM, Butera KA, Skinner JW, Clark DJ. Interpreting Prefrontal Recruitment During Walking After Stroke: Influence of Individual Differences in Mobility and Cognitive Function. Frontiers in Human Neuroscience. 13: 194. PMID 31316360 DOI: 10.3389/Fnhum.2019.00194  0.058
2019 Biswas S, Brennan A, Duffy SJ, Andrianopoulos N, Chan W, Walton A, Noaman S, Shaw JA, Ajani A, Clark DJ, Freeman M, Hiew C, Oqueli E, Lefkovits J, Reid CM, et al. The Impact of Out-of-Hours Presentation on Clinical Outcomes in ST-Elevation Myocardial Infarction. Heart, Lung & Circulation. PMID 31262617 DOI: 10.1016/j.hlc.2019.05.184  0.086
2019 Chatterjee SA, Rose DK, Porges EC, Otzel DM, Clark DJ. A Perspective on Objective Measurement of the Perceived Challenge of Walking. Frontiers in Human Neuroscience. 13: 161. PMID 31139069 DOI: 10.3389/Fnhum.2019.00161  0.063
2019 Hawkins KA, Balasubramanian CK, Vistamehr A, Conroy C, Rose DK, Clark DJ, Fox EJ. Assessment of backward walking unmasks mobility impairments in post-stroke community ambulators. Topics in Stroke Rehabilitation. 1-7. PMID 31081491 DOI: 10.1080/10749357.2019.1609182  0.026
2019 Yudi MB, Clark DJ, Farouque O, Andrianopoulos N, Ajani AE, Brennan A, Lefkovits J, Freeman M, Hiew C, Selkrig LA, O'Brien J, Dart AM, Reid CM, Duffy SJ. Trends and predictors of recurrent acute coronary syndrome hospitalizations and unplanned revascularization after index acute myocardial infarction treated with percutaneous coronary intervention. American Heart Journal. 212: 134-143. PMID 31004916 DOI: 10.1016/j.ahj.2019.02.013  0.072
2019 Theuerle J, Farouque O, Vasanthakumar S, Patel SK, Burrell LM, Clark DJ, Al-Fiadh AH. Plasma endothelin-1 and adrenomedullin are associated with coronary artery function and cardiovascular outcomes in humans. International Journal of Cardiology. PMID 30987836 DOI: 10.1016/j.ijcard.2019.04.008  0.053
2019 Clark DJ, Hu Y, Schnaubelt M, Fu Y, Ponce S, Chen SY, Zhou Y, Shah P, Zhang H. Simple Tip-Based Sample Processing Method for Urinary Proteomic Analysis. Analytical Chemistry. PMID 30924636 DOI: 10.1021/acs.analchem.8b05234  0.049
2019 Griffiths BB, Sahbaie P, Rao A, Arvola O, Xu L, Liang D, Ouyang Y, Clark DJ, Giffard RG, Stary CM. Pre-treatment with microRNA-181a Antagomir Prevents Loss of Parvalbumin Expression and Preserves Novel Object Recognition Following Mild Traumatic Brain Injury. Neuromolecular Medicine. PMID 30900118 DOI: 10.1007/S12017-019-08532-Y  0.198
2019 Murphy A, Hamilton G, Andrianopoulos N, Yudi MB, Farouque O, Duffy SJ, Lefkovits J, Brennan A, Reid CM, Ajani AE, Clark DJ. One-Year Outcomes of Patients With Established Coronary Artery Disease Presenting With Acute Coronary Syndromes. The American Journal of Cardiology. PMID 30797559 DOI: 10.1016/j.amjcard.2019.01.037  0.084
2019 Hamdani O, Dhillon N, Hsieh TS, Fujita T, Ocampo J, Kirkland JG, Lawrimore J, Kobayashi TJ, Friedman B, Fulton D, Wu KY, Chereji RV, Oki M, Bloom K, Clark DJ, et al. Transfer RNA Genes Affect Chromosome Structure and Function via Local Effects. Molecular and Cellular Biology. PMID 30718362 DOI: 10.1128/Mcb.00432-18  0.051
2019 Ocampo J, Chereji RV, Eriksson PR, Clark DJ. Contrasting roles of the RSC and ISW1/CHD1 chromatin remodelers in RNA polymerase II elongation and termination. Genome Research. PMID 30683752 DOI: 10.1101/gr.242032.118  0.064
2019 Biswas S, Andrianopoulos N, Duffy SJ, Lefkovits J, Brennan A, Walton A, Chan W, Noaman S, Shaw JA, Ajani A, Clark DJ, Freeman M, Hiew C, Oqueli E, Reid CM, et al. Impact of Socioeconomic Status on Clinical Outcomes in Patients With ST-Segment-Elevation Myocardial Infarction. Circulation. Cardiovascular Quality and Outcomes. 12: e004979. PMID 30606051 DOI: 10.1161/CIRCOUTCOMES.118.004979  0.08
2018 Stewart AN, Tan SY, Clark DJ, Zhang H, Wong GW. N-linked glycosylation dependent and independent mechanisms regulating CTRP12 cleavage, secretion, and stability. Biochemistry. PMID 30566828 DOI: 10.1021/acs.biochem.8b00528  0.068
2018 Mehta GD, Ball DA, Eriksson PR, Chereji RV, Clark DJ, McNally JG, Karpova TS. Single-Molecule Analysis Reveals Linked Cycles of RSC Chromatin Remodeling and Ace1p Transcription Factor Binding in Yeast. Molecular Cell. PMID 30318444 DOI: 10.1016/J.Molcel.2018.09.009  0.06
2018 Chatterjee SA, Daly JJ, Porges EC, Fox EJ, Rose DK, McGuirk TE, Otzel DM, Butera KA, Clark DJ. Mobility Function and Recovery After Stroke: Preliminary Insights From Sympathetic Nervous System Activity. Journal of Neurologic Physical Therapy : Jnpt. PMID 30138228 DOI: 10.1097/Npt.0000000000000238  0.067
2018 Biswas S, Andrianopoulos N, Papapostolou S, Noaman S, Duffy SJ, Lefkovits J, Brennan A, Walton A, Shaw JA, Ajani A, Clark DJ, Freeman M, Hiew C, Oqueli E, Reid CM, et al. Does the subtype of acute coronary syndrome treated by percutaneous coronary intervention predict long-term clinical outcomes? European Heart Journal. Quality of Care & Clinical Outcomes. PMID 30124800 DOI: 10.1093/ehjqcco/qcy009  0.077
2018 O'Brien J, Reid CM, Andrianopoulos N, Ajani AE, Clark DJ, Krum H, Loane P, Freeman M, Sebastian M, Brennan AL, Shaw J, Dart AM, Duffy SJ. Heart Rate as a Predictor of Outcome Following Percutaneous Coronary Intervention. The American Journal of Cardiology. PMID 30107905 DOI: 10.1016/j.amjcard.2018.06.042  0.064
2018 Badawy MK, Scott M, Farouque O, Horrigan M, Clark DJ, Chan RK. Feasibility of using ultra-low pulse rate fluoroscopy during routine diagnostic coronary angiography. Journal of Medical Radiation Sciences. PMID 30014587 DOI: 10.1002/jmrs.293  0.052
2018 Mertins P, Tang LC, Krug K, Clark DJ, Gritsenko MA, Chen L, Clauser KR, Clauss TR, Shah P, Gillette MA, Petyuk VA, Thomas SN, Mani DR, Mundt F, Moore RJ, et al. Reproducible workflow for multiplexed deep-scale proteome and phosphoproteome analysis of tumor tissues by liquid chromatography-mass spectrometry. Nature Protocols. PMID 29988108 DOI: 10.1038/S41596-018-0006-9  0.051
2018 Gouelle A, Rennie L, Clark DJ, Mégrot F, Balasubramanian CK. Addressing limitations of the Gait Variability Index to enhance its applicability: The enhanced GVI (EGVI). Plos One. 13: e0198267. PMID 29856818 DOI: 10.1371/Journal.Pone.0198267  0.07
2018 Rawal Y, Chereji RV, Qiu H, Ananthakrishnan S, Govind CK, Clark DJ, Hinnebusch AG. SWI/SNF and RSC cooperate to reposition and evict promoter nucleosomes at highly expressed genes in yeast. Genes & Development. PMID 29785963 DOI: 10.1101/Gad.312850.118  0.079
2018 Hu Y, Shah P, Clark DJ, Ao M, Zhang H. Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides. Analytical Chemistry. PMID 29741879 DOI: 10.1021/acs.analchem.8b01137  0.06
2018 Vistamehr A, Balasubramanian CK, Clark DJ, Neptune RR, Fox EJ. Dynamic balance during walking adaptability tasks in individuals post-stroke. Journal of Biomechanics. PMID 29724539 DOI: 10.1016/J.Jbiomech.2018.04.029  0.045
2018 Clark DJ, Hu Y, Bocik W, Chen L, Schnaubelt M, Roberts R, Shah P, Whiteley G, Zhang H. Evaluation of NCI-7 Cell Line Panel as a Reference Material for Clinical Proteomics. Journal of Proteome Research. PMID 29718670 DOI: 10.1021/acs.jproteome.8b00165  0.054
2018 Ouda R, Sarai N, Nehru V, Patel MC, Debrosse M, Bachu M, Chereji RV, Eriksson PR, Clark DJ, Ozato K. SPT6 interacts with NSD2 and facilitates interferon-induced transcription. Febs Letters. PMID 29683485 DOI: 10.1002/1873-3468.13069  0.073
2018 Rawal Y, Chereji RV, Valabhoju V, Qiu H, Ocampo J, Clark DJ, Hinnebusch AG. Gcn4 Binding in Coding Regions Can Activate Internal and Canonical 5' Promoters in Yeast. Molecular Cell. PMID 29628310 DOI: 10.1016/J.Molcel.2018.03.007  0.063
2018 Chereji RV, Clark DJ. Major Determinants of Nucleosome Positioning. Biophysical Journal. PMID 29628211 DOI: 10.1016/j.bpj.2018.03.015  0.067
2018 Clark DJ, Tyson J, Sails AD, Krishna S, Staines HM. The current landscape of nucleic acid tests for filovirus detection. Journal of Clinical Virology : the Official Publication of the Pan American Society For Clinical Virology. 103: 27-36. PMID 29625392 DOI: 10.1016/j.jcv.2018.03.005  0.054
2018 Hawkins KA, Fox EJ, Daly JJ, Rose DK, Christou EA, McGuirk TE, Otzel DM, Butera KA, Chatterjee SA, Clark DJ. Prefrontal over-activation during walking in people with mobility deficits: Interpretation and functional implications. Human Movement Science. 59: 46-55. PMID 29604488 DOI: 10.1016/J.Humov.2018.03.010  0.05
2018 Rose DK, DeMark L, Fox EJ, Clark DJ, Wludyka P. A Backward Walking Training Program to Improve Balance and Mobility in Acute Stroke: A Pilot Randomized Controlled Trial. Journal of Neurologic Physical Therapy : Jnpt. 42: 12-21. PMID 29232308 DOI: 10.1097/Npt.0000000000000210  0.046
2017 Stub D, Lefkovits J, Brennan AL, Dinh D, Brien R, Duffy SJ, Cox N, Nadurata V, Clark DJ, Andrianopoulos N, Harper R, McNeil J, Reid CM. The Establishment of the Victorian Cardiac Outcomes Registry (VCOR): Monitoring and Optimising Outcomes for Cardiac Patients in Victoria. Heart, Lung & Circulation. PMID 29291960 DOI: 10.1016/j.hlc.2017.07.013  0.059
2017 Clark DJ, Chatterjee SA, McGuirk TE, Porges EC, Fox EJ, Balasubramanian CK. Sympathetic nervous system activity measured by skin conductance quantifies the challenge of walking adaptability tasks after stroke. Gait & Posture. 60: 148-153. PMID 29216598 DOI: 10.1016/J.Gaitpost.2017.11.025  0.064
2017 Biswas S, Duffy SJ, Lefkovits J, Andrianopoulos N, Brennan A, Walton A, Chan W, Noaman S, Shaw JA, Dawson L, Ajani A, Clark DJ, Freeman M, Hiew C, Oqueli E, et al. Australian Trends in Procedural Characteristics and Outcomes in Patients Undergoing Percutaneous Coronary Intervention for ST-Elevation Myocardial Infarction. The American Journal of Cardiology. PMID 29198986 DOI: 10.1016/j.amjcard.2017.10.025  0.101
2017 Theuerle J, Yudi MB, Farouque O, Andrianopoulos N, Scott P, Ajani AE, Brennan A, Duffy SJ, Reid CM, Clark DJ. Utility of the ACC/AHA lesion classification as a predictor of procedural, 30-day and 12-month outcomes in the contemporary percutaneous coronary intervention era. Catheterization and Cardiovascular Interventions : Official Journal of the Society For Cardiac Angiography & Interventions. PMID 29139601 DOI: 10.1002/ccd.27411  0.058
2017 Johnson TA, Chereji RV, Stavreva DA, Morris SA, Hager GL, Clark DJ. Conventional and pioneer modes of glucocorticoid receptor interaction with enhancer chromatin in vivo. Nucleic Acids Research. PMID 29126175 DOI: 10.1093/Nar/Gkx1044  0.072
2017 Yudi MB, Farouque O, Andrianopoulos N, Ajani AE, Kalten K, Brennan AL, Lefkovits J, Hiew C, Oqueli E, Reid CM, Duffy SJ, Clark DJ. The prognostic significance of smoking cessation after acute coronary syndromes: an observational, multicentre study from the Melbourne interventional group registry. Bmj Open. 7: e016874. PMID 28988174 DOI: 10.1136/bmjopen-2017-016874  0.06
2017 Agnandji ST, Fernandes JF, Bache EB, Obiang Mba RM, Brosnahan JS, Kabwende L, Pitzinger P, Staarink P, Massinga-Loembe M, Krähling V, Biedenkopf N, Fehling SK, Strecker T, Clark DJ, Staines HM, et al. Safety and immunogenicity of rVSVΔG-ZEBOV-GP Ebola vaccine in adults and children in Lambaréné, Gabon: A phase I randomised trial. Plos Medicine. 14: e1002402. PMID 28985239 DOI: 10.1371/journal.pmed.1002402  0.014
2017 Papapostolou S, Andrianopoulos N, Duffy SJ, Brennan AL, Ajani AE, Clark DJ, Reid CM, Freeman M, Sebastian M, Selkrig L, Yudi MB, Noaman SQ, Chan W. Long-term Clinical Outcomes of Transient and Persistent No-Reflow Following Percutaneous Coronary Intervention (PCI): A Multi-Center Australian Registry. Eurointervention : Journal of Europcr in Collaboration With the Working Group On Interventional Cardiology of the European Society of Cardiology. PMID 28966156 DOI: 10.4244/EIJ-D-17-00269  0.061
2017 Yudi MB, Farouque O, Andrianopoulos N, Ajani AE, Brennan A, Lefkovits J, Reid CM, Chan W, Duffy SJ, Clark DJ. Pretreatment with dual antiplatelet therapy in patients with ST-elevation myocardial infarction. Catheterization and Cardiovascular Interventions : Official Journal of the Society For Cardiac Angiography & Interventions. PMID 28963757 DOI: 10.1002/ccd.27325  0.068
2017 Hawkins KA, Clark DJ, Balasubramanian CK, Fox EJ. Walking on uneven terrain in healthy adults and the implications for people after stroke. Neurorehabilitation. PMID 28946584 DOI: 10.3233/Nre-172154  0.035
2017 Lodha N, Chen YT, McGuirk TE, Fox EJ, Kautz SA, Christou EA, Clark DJ. EMG synchrony to assess impaired corticomotor control of locomotion after stroke. Journal of Electromyography and Kinesiology : Official Journal of the International Society of Electrophysiological Kinesiology. 37: 35-40. PMID 28888972 DOI: 10.1016/J.Jelekin.2017.08.007  0.053
2017 Yudi MB, Hamilton G, Farouque O, Andrianopoulos N, Duffy SJ, Lefkovits J, Brennan A, Fernando D, Hiew C, Freeman M, Reid CM, Dakis R, Ajani AE, Clark DJ. Trends and Impact of Door-to-Balloon Time on Clinical Outcomes in Patients Aged <75, 75 to 84, and ≥85 Years With ST-Elevation Myocardial Infarction. The American Journal of Cardiology. PMID 28886858 DOI: 10.1016/j.amjcard.2017.07.005  0.068
2017 Zhou J, Yang W, Hu Y, Hoti N, Liu Y, Shah P, Sun S, Clark DJ, Thomas SN, Zhang H. Site-specific fucosylation analysis identifies glycoproteins associated with aggressive prostate cancer cell lines using tandem affinity enrichments of intact glycopeptides followed by mass spectrometry. Analytical Chemistry. PMID 28627880 DOI: 10.1021/Acs.Analchem.7B01493  0.057
2017 Budhdeo S, Kolias AG, Clark DJ, Chari A, Hutchinson PJ, Warburton EA. A Retrospective Cohort Study to Assess Patient and Physician Reported Outcome Measures After Decompressive Hemicraniectomy for Malignant Middle Cerebral Artery Stroke. Cureus. 9: e1237. PMID 28620567 DOI: 10.7759/cureus.1237  0.051
2017 ClarK DJ, Mao L. Understanding the Surgical Margin: A Molecular Assessment. Oral and Maxillofacial Surgery Clinics of North America. PMID 28528739 DOI: 10.1016/j.coms.2017.03.002  0.063
2017 Yeoh J, Yudi MB, Andrianopoulos N, Yan BP, Clark DJ, Duffy SJ, Brennan A, New G, Freeman M, Eccleston D, Sebastian M, Reid CM, Wilson W, Ajani AE. Evolution of Australian Percutaneous Coronary Intervention (from the Melbourne Interventional Group [MIG] Registry). The American Journal of Cardiology. PMID 28495431 DOI: 10.1016/j.amjcard.2017.03.258  0.086
2017 Chereji RV, Ocampo J, Clark DJ. MNase-Sensitive Complexes in Yeast: Nucleosomes and Non-histone Barriers. Molecular Cell. 65: 565-577.e3. PMID 28157509 DOI: 10.1016/j.molcel.2016.12.009  0.065
2016 Ocampo J, Cui F, Zhurkin VB, Clark DJ. The proto-chromatosome: A fundamental subunit of chromatin? Nucleus (Austin, Tex.). 7: 382-387. PMID 27645053 DOI: 10.1080/19491034.2016.1220466  0.043
2016 Yudi MB, Ramchand J, Farouque O, Andrianopoulos N, Chan W, Duffy SJ, Lefkovits J, Brennan A, Spencer R, Fernando D, Hiew C, Freeman M, Reid CM, Ajani AE, Clark DJ, et al. Impact of door-to-balloon time on long-term mortality in high- and low-risk patients with ST-elevation myocardial infarction. International Journal of Cardiology. 224: 72-78. PMID 27631718 DOI: 10.1016/j.ijcard.2016.09.003  0.054
2016 Yudi MB, Clark DJ, Tsang D, Jelinek M, Kalten K, Joshi S, Phan K, Nasis A, Amerena J, Arunothayaraj S, Reid C, Farouque O. SMARTphone-based, early cardiac REHABilitation in patients with acute coronary syndromes [SMART-REHAB Trial]: a randomized controlled trial protocol. Bmc Cardiovascular Disorders. 16: 170. PMID 27596569 DOI: 10.1186/s12872-016-0356-6  0.088
2016 Yudi MB, Jones N, Fernando D, Clark DJ, Ramchand J, Jones E, Dakis R, Johnson D, Chan R, Islam A, Farouque O, Horrigan M. Management of Patients Aged ≥85 Years With ST-Elevation Myocardial Infarction. The American Journal of Cardiology. PMID 27217208 DOI: 10.1016/j.amjcard.2016.04.010  0.072
2016 Clark DJ, Chakraborty A, Roebuck DJ, Thompson DN. Ultrasound guided placement of the distal catheter in paediatric ventriculoatrial shunts-an appraisal of efficacy and complications. Child's Nervous System : Chns : Official Journal of the International Society For Pediatric Neurosurgery. PMID 27207611 DOI: 10.1007/s00381-016-3120-4  0.056
2016 Yudi MB, Ajani AE, Andrianopoulos N, Duffy SJ, Farouque O, Ramchand J, Gurvitch R, Lefkovits J, Freeman M, Brennan A, Clark DJ, Reid C, Eccleston D. Early versus delayed percutaneous coronary intervention in patients with non-ST elevation acute coronary syndromes. Coronary Artery Disease. PMID 27097120 DOI: 10.1097/MCA.0000000000000374  0.085
2016 Ocampo J, Chereji RV, Eriksson PR, Clark DJ. The ISW1 and CHD1 ATP-dependent chromatin remodelers compete to set nucleosome spacing in vivo. Nucleic Acids Research. PMID 26861626 DOI: 10.1093/nar/gkw068  0.05
2016 Clark DJ. Composite Versus Ceramics, Part I: Young Patients and Fractures. Dentistry Today. 35: 132, 134-5. PMID 26846063  0.06
2016 Clark DJ, Mei Y, Sun S, Zhang H, Yang AJ, Mao L. Glycoproteomic Approach Identifies KRAS as a Positive Regulator of CREG1 in Non-small Cell Lung Cancer Cells. Theranostics. 6: 65-77. PMID 26722374 DOI: 10.7150/Thno.12350  0.044
2016 Nguyen H, Sahbaie P, Taslakjian B, Clark DJ, Huang T. Extracellular Superoxide Dismutase as a Therapeutic Target in a Mouse Model of Gulf War Illness Free Radical Biology and Medicine. 100: S164. DOI: 10.1016/J.Freeradbiomed.2016.10.431  0.326
2015 Clark DJ, Fondrie WE, Yang A, Mao L. Triple SILAC quantitative proteomic analysis reveals differential abundance of cell signaling proteins between normal and lung cancer-derived exosomes. Journal of Proteomics. PMID 26739763 DOI: 10.1016/J.Jprot.2015.12.023  0.053
2015 Clark DJ, Kolias AG, Garnett MR, Trivedi RA, Price SJ, Hutchinson PJ. Student-selected components in neurosurgery. British Journal of Neurosurgery. 1-3. PMID 26610147 DOI: 10.3109/02688697.2015.1114590  0.031
2015 Qiu H, Chereji R, Hu C, Cole HA, Rawal Y, Clark DJ, Hinnebusch AG. Genome-wide cooperation by HAT Gcn5, remodeler SWI/SNF, and chaperone Ydj1 in promoter nucleosome eviction and transcriptional activation. Genome Research. PMID 26602697 DOI: 10.1101/Gr.196337.115  0.066
2015 Clark DJ, Neptune RR, Behrman AL, Kautz SA. A locomotor adaptability task promotes intense and task-appropriate output from the paretic leg during walking. Archives of Physical Medicine and Rehabilitation. PMID 26525528 DOI: 10.1016/J.Apmr.2015.10.081  0.045
2015 Ocampo J, Clark DJ. A Positive Twist to the Centromeric Nucleosome. Cell Reports. 13: 645-6. PMID 26510160 DOI: 10.1016/j.celrep.2015.10.007  0.04
2015 Anton SD, Woods AJ, Ashizawa T, Barb D, Buford TW, Carter CS, Clark DJ, Cohen RA, Corbett DB, Cruz-Almeida Y, Dotson V, Ebner N, Efron PA, Fillingim RB, Foster TC, et al. Successful aging: Advancing the science of physical independence in older adults. Ageing Research Reviews. PMID 26462882 DOI: 10.1016/J.Arr.2015.09.005  0.066
2015 Clark DJ, Leblanc BP. Analysis of DNA Supercoiling Induced by DNA-Protein Interactions. Methods in Molecular Biology (Clifton, N.J.). 1334: 161-72. PMID 26404149 DOI: 10.1007/978-1-4939-2877-4_10  0.046
2015 Cole HA, Cui F, Ocampo J, Burke TL, Nikitina T, Nagarajavel V, Kotomura N, Zhurkin VB, Clark DJ. Novel nucleosomal particles containing core histones and linker DNA but no histone H1. Nucleic Acids Research. PMID 26400169 DOI: 10.1093/Nar/Gkv943  0.049
2015 Sorond FA, Cruz-Almeida Y, Clark DJ, Viswanathan A, Scherzer CR, De Jager P, Csiszar A, Laurienti PJ, Hausdorff J, Chen WG, Ferrucci L, Rosano C, Studenski SA, Black SE, Lipsitz LA. Aging, the Central Nervous System, and Mobility in Older Adults: Neural Mechanisms of Mobility Impairment. The Journals of Gerontology. Series a, Biological Sciences and Medical Sciences. PMID 26386013 DOI: 10.1093/Gerona/Glv130  0.042
2015 Clark DJ, Fondrie WE, Liao Z, Hanson PI, Fulton A, Mao L, Yang AJ. Redefining the breast cancer exosome proteome by tandem mass tag quantitative proteomics and multivariate cluster analysis. Analytical Chemistry. PMID 26378940 DOI: 10.1021/Acs.Analchem.5B02586  0.049
2015 Wlodarczyk J, Ajani AE, Kemp D, Andrianopoulos N, Brennan AL, Duffy SJ, Clark DJ, Reid CM. Incidence, Predictors and Outcomes of Major Bleeding in Patients Following Percutaneous Coronary Interventions in Australia. Heart, Lung & Circulation. PMID 26320074 DOI: 10.1016/j.hlc.2015.06.826  0.065
2015 Couper LT, Loane P, Andrianopoulos N, Brennan A, Nanayakkara S, Nerlekar N, Scott P, Walton AS, Clark DJ, Duffy SJ, Ajani AE, Reid C, Shaw JA. Utility of rotational atherectomy and outcomes over an eight-year period. Catheterization and Cardiovascular Interventions : Official Journal of the Society For Cardiac Angiography & Interventions. PMID 26152449 DOI: 10.1002/ccd.26077  0.055
2015 Lim HS, Andrianopoulos N, Sugumar H, Stub D, Brennan AL, Lim CC, Barlis P, Van Gaal W, Reid CM, Charter K, Sebastian M, New G, Ajani AE, Farouque O, Duffy SJ, ... Clark DJ, et al. Long-term survival of elderly patients undergoing percutaneous coronary intervention for myocardial infarction complicated by cardiogenic shock. International Journal of Cardiology. 195: 259-64. PMID 26048389 DOI: 10.1016/j.ijcard.2015.05.130  0.063
2015 Clark DJ. Automaticity of walking: functional significance, mechanisms, measurement and rehabilitation strategies. Frontiers in Human Neuroscience. 9: 246. PMID 25999838 DOI: 10.3389/Fnhum.2015.00246  0.07
2015 Shi X, Guo TZ, Wei T, Li WW, Clark DJ, Kingery WS. Facilitated spinal neuropeptide signaling and upregulated inflammatory mediator expression contribute to post-fracture nociceptive sensitization. Pain. PMID 25932690 DOI: 10.1097/J.Pain.0000000000000204  0.302
2015 Balasubramanian CK, Clark DJ, Gouelle A. Validity of the gait variability index in older adults: effect of aging and mobility impairments. Gait & Posture. 41: 941-6. PMID 25882115 DOI: 10.1016/J.Gaitpost.2015.03.349  0.054
2015 Al-Fiadh AH, Wong TY, Kawasaki R, Clark DJ, Patel SK, Freeman M, Wilson A, Burrell LM, Farouque O. Usefulness of retinal microvascular endothelial dysfunction as a predictor of coronary artery disease. The American Journal of Cardiology. 115: 609-13. PMID 25591896 DOI: 10.1016/J.Amjcard.2014.12.011  0.054
2015 Reid KF, Martin KI, Doros G, Clark DJ, Hau C, Patten C, Phillips EM, Frontera WR, Fielding RA. Comparative effects of light or heavy resistance power training for improving lower extremity power and physical performance in mobility-limited older adults. The Journals of Gerontology. Series a, Biological Sciences and Medical Sciences. 70: 374-80. PMID 25199912 DOI: 10.1093/Gerona/Glu156  0.042
2015 Tajerian M, Leu D, Huang T, Clark D. (286) Autoimmune mechanisms of pain in a mouse model of complex regional pain syndrome The Journal of Pain. 16: S47. DOI: 10.1016/J.Jpain.2015.01.204  0.632
2014 Cole HA, Ocampo J, Iben JR, Chereji RV, Clark DJ. Heavy transcription of yeast genes correlates with differential loss of histone H2B relative to H4 and queued RNA polymerases. Nucleic Acids Research. 42: 12512-22. PMID 25348398 DOI: 10.1093/Nar/Gku1013  0.068
2014 Flood P, Clark D. Genetic variability in the activity of monoamines: a window into the complexity of pain. Anesthesia and Analgesia. 119: 1032-8. PMID 25329022 DOI: 10.1213/Ane.0000000000000447  0.321
2014 Balasubramanian CK, Clark DJ, Fox EJ. Walking adaptability after a stroke and its assessment in clinical settings. Stroke Research and Treatment. 2014: 591013. PMID 25254140 DOI: 10.1155/2014/591013  0.057
2014 Clark DJ, Rose DK, Ring SA, Porges EC. Utilization of central nervous system resources for preparation and performance of complex walking tasks in older adults. Frontiers in Aging Neuroscience. 6: 217. PMID 25202270 DOI: 10.3389/Fnagi.2014.00217  0.066
2014 Clark DJ, Christou EA, Ring SA, Williamson JB, Doty L. Enhanced somatosensory feedback reduces prefrontal cortical activity during walking in older adults. The Journals of Gerontology. Series a, Biological Sciences and Medical Sciences. 69: 1422-8. PMID 25112494 DOI: 10.1093/Gerona/Glu125  0.055
2014 Ganguli D, Chereji RV, Iben JR, Cole HA, Clark DJ. RSC-dependent constructive and destructive interference between opposing arrays of phased nucleosomes in yeast. Genome Research. 24: 1637-49. PMID 25015381 DOI: 10.1101/Gr.177014.114  0.067
2014 Funk KE, Thomas SN, Schafer KN, Cooper GL, Liao Z, Clark DJ, Yang AJ, Kuret J. Lysine methylation is an endogenous post-translational modification of tau protein in human brain and a modulator of aggregation propensity. The Biochemical Journal. 462: 77-88. PMID 24869773 DOI: 10.1042/Bj20140372  0.046
2014 Clark DJ, Reid KF, Patten C, Phillips EM, Ring SA, Wu SS, Fielding RA. Does quadriceps neuromuscular activation capability explain walking speed in older men and women? Experimental Gerontology. 55: 49-53. PMID 24703887 DOI: 10.1016/J.Exger.2014.03.019  0.064
2014 Sugumar H, Lancefield TF, Andrianopoulos N, Duffy SJ, Ajani AE, Freeman M, Buxton B, Brennan AL, Yan BP, Dinh DT, Smith JA, Charter K, Farouque O, Reid CM, Clark DJ, et al. Impact of renal function in patients with multi-vessel coronary disease on long-term mortality following coronary artery bypass grafting compared with percutaneous coronary intervention. International Journal of Cardiology. 172: 442-9. PMID 24521692 DOI: 10.1016/j.ijcard.2014.01.096  0.057
2014 Cole JA, Brennan AL, Ajani AE, Yan BP, Duffy SJ, Loane P, Reid CM, Yudi MB, New G, Black A, Shaw J, Clark DJ, Andrianopoulos N. Cardiovascular medication use following percutaneous coronary intervention: the Australian experience. Cardiovascular Therapeutics. 32: 47-51. PMID 24393169 DOI: 10.1111/1755-5922.12060  0.066
2014 Buford TW, Anton SD, Clark DJ, Higgins TJ, Cooke MB. Optimizing the benefits of exercise on physical function in older adults. Pm & R : the Journal of Injury, Function, and Rehabilitation. 6: 528-43. PMID 24361365 DOI: 10.1016/J.Pmrj.2013.11.009  0.042
2014 Chang HW, Kulaeva OI, Shaytan AK, Kibanov M, Kuznedelov K, Severinov KV, Kirpichnikov MP, Clark DJ, Studitsky VM. Analysis of the mechanism of nucleosome survival during transcription. Nucleic Acids Research. 42: 1619-27. PMID 24234452 DOI: 10.1093/Nar/Gkt1120  0.056
2014 Reid KF, Pasha E, Doros G, Clark DJ, Patten C, Phillips EM, Frontera WR, Fielding RA. Longitudinal decline of lower extremity muscle power in healthy and mobility-limited older adults: influence of muscle mass, strength, composition, neuromuscular activation and single fiber contractile properties. European Journal of Applied Physiology. 114: 29-39. PMID 24122149 DOI: 10.1007/S00421-013-2728-2  0.041
2013 Nagarajavel V, Iben JR, Howard BH, Maraia RJ, Clark DJ. Global 'bootprinting' reveals the elastic architecture of the yeast TFIIIB-TFIIIC transcription complex in vivo. Nucleic Acids Research. 41: 8135-43. PMID 23856458 DOI: 10.1093/Nar/Gkt611  0.073
2013 Pieper R, Zhang Q, Clark DJ, Parmar PP, Alami H, Suh MJ, Kuntumalla S, Braisted JC, Huang ST, Tzipori S. Proteomic View of Interactions of Shiga Toxin-Producing Escherichia coli with the Intestinal Environment in Gnotobiotic Piglets. Plos One. 8: e66462. PMID 23840478 DOI: 10.1371/Journal.Pone.0066462  0.042
2013 Fox EJ, Tester NJ, Kautz SA, Howland DR, Clark DJ, Garvan C, Behrman AL. Modular control of varied locomotor tasks in children with incomplete spinal cord injuries. Journal of Neurophysiology. 110: 1415-25. PMID 23761702 DOI: 10.1152/Jn.00676.2012  0.051
2013 Clark DJ, Kautz SA, Bauer AR, Chen YT, Christou EA. Synchronous EMG activity in the piper frequency band reveals the corticospinal demand of walking tasks. Annals of Biomedical Engineering. 41: 1778-86. PMID 23740367 DOI: 10.1007/S10439-013-0832-4  0.048
2013 Clark DJ, Pojednic RM, Reid KF, Patten C, Pasha EP, Phillips EM, Fielding RA. Longitudinal decline of neuromuscular activation and power in healthy older adults. The Journals of Gerontology. Series a, Biological Sciences and Medical Sciences. 68: 1419-25. PMID 23676250 DOI: 10.1093/Gerona/Glt036  0.064
2013 Ariyaratne TV, Ademi Z, Duffy SJ, Andrianopoulos N, Billah B, Brennan AL, New G, Black A, Ajani AE, Clark DJ, Yan BP, Yap CH, Reid CM. Cardiovascular readmissions and excess costs following percutaneous coronary intervention in patients with chronic kidney disease: data from a large multi-centre Australian registry. International Journal of Cardiology. 168: 2783-90. PMID 23643437 DOI: 10.1016/j.ijcard.2013.03.128  0.086
2013 Bamias G, Clark DJ, Rivera-Nieves J. Leukocyte traffic blockade as a therapeutic strategy in inflammatory bowel disease. Current Drug Targets. 14: 1490-500. PMID 23621509  0.071
2013 Routson RL, Clark DJ, Bowden MG, Kautz SA, Neptune RR. The influence of locomotor rehabilitation on module quality and post-stroke hemiparetic walking performance. Gait & Posture. 38: 511-7. PMID 23489952 DOI: 10.1016/J.Gaitpost.2013.01.020  0.054
2013 Clark DJ, Manini TM, Fielding RA, Patten C. Neuromuscular determinants of maximum walking speed in well-functioning older adults. Experimental Gerontology. 48: 358-63. PMID 23376102 DOI: 10.1016/J.Exger.2013.01.010  0.049
2013 Clark DJ, Patten C. Eccentric versus concentric resistance training to enhance neuromuscular activation and walking speed following stroke. Neurorehabilitation and Neural Repair. 27: 335-44. PMID 23292848 DOI: 10.1177/1545968312469833  0.04
2013 Lim HS, Stub D, Ajani AE, Andrianopoulos N, Reid CM, Charter K, Black A, Smith K, New G, Chan W, Lim CC, Farouque O, Shaw J, Brennan A, Duffy SJ, ... Clark DJ, et al. Survival in patients with myocardial infarction complicated by out-of-hospital cardiac arrest undergoing emergency percutaneous coronary intervention. International Journal of Cardiology. 166: 425-30. PMID 22133465 DOI: 10.1016/j.ijcard.2011.10.131  0.063
2012 Zou Y, Corniola R, Leu D, Khan A, Sahbaie P, Chakraborti A, Clark DJ, Fike JR, Huang TT. Extracellular superoxide dismutase is important for hippocampal neurogenesis and preservation of cognitive functions after irradiation. Proceedings of the National Academy of Sciences of the United States of America. 109: 21522-7. PMID 23236175 DOI: 10.1073/Pnas.1216913110  0.217
2012 Guo TZ, Wei T, Shi X, Li WW, Hou S, Wang L, Tsujikawa K, Rice KC, Cheng K, Clark DJ, Kingery WS. Neuropeptide deficient mice have attenuated nociceptive, vascular, and inflammatory changes in a tibia fracture model of complex regional pain syndrome. Molecular Pain. 8: 85. PMID 23191958 DOI: 10.1186/1744-8069-8-85  0.298
2012 Carvalho B, Clark DJ, Yeomans D, Angst MS. Collecting and measuring wound exudate biochemical mediators in surgical wounds. Journal of Visualized Experiments : Jove. PMID 23117346 DOI: 10.3791/50133  0.272
2012 Cui F, Cole HA, Clark DJ, Zhurkin VB. Transcriptional activation of yeast genes disrupts intragenic nucleosome phasing. Nucleic Acids Research. 40: 10753-64. PMID 23012262 DOI: 10.1093/Nar/Gks870  0.074
2012 Cole HA, Howard BH, Clark DJ. Genome-wide mapping of nucleosomes in yeast using paired-end sequencing. Methods in Enzymology. 513: 145-68. PMID 22929768 DOI: 10.1016/B978-0-12-391938-0.00006-9  0.057
2012 Pojednic RM, Clark DJ, Patten C, Reid K, Phillips EM, Fielding RA. The specific contributions of force and velocity to muscle power in older adults. Experimental Gerontology. 47: 608-13. PMID 22626972 DOI: 10.1016/J.Exger.2012.05.010  0.05
2012 Eriksson PR, Ganguli D, Nagarajavel V, Clark DJ. Regulation of histone gene expression in budding yeast. Genetics. 191: 7-20. PMID 22555441 DOI: 10.1534/genetics.112.140145  0.054
2012 Chu LF, Cun T, Ngai LK, Kim JE, Zamora AK, Young CA, Angst MS, Clark DJ. Modulation of remifentanil-induced postinfusion hyperalgesia by the β-blocker propranolol in humans. Pain. 153: 974-81. PMID 22365565 DOI: 10.1016/J.Pain.2012.01.014  0.304
2012 Cole HA, Nagarajavel V, Clark DJ. Perfect and imperfect nucleosome positioning in yeast. Biochimica Et Biophysica Acta. 1819: 639-43. PMID 22306662 DOI: 10.1016/j.bbagrm.2012.01.008  0.049
2012 Chan W, Ajani AE, Clark DJ, Stub D, Andrianopoulos N, Brennan AL, New G, Sebastian M, Johnston R, Walton A, Reid CM, Dart AM, Duffy SJ. Impact of periprocedural atrial fibrillation on short-term clinical outcomes following percutaneous coronary intervention. The American Journal of Cardiology. 109: 471-7. PMID 22177002 DOI: 10.1016/j.amjcard.2011.10.004  0.067
2012 Chan W, Stub D, Clark DJ, Ajani AE, Andrianopoulos N, Brennan AL, New G, Black A, Shaw JA, Reid CM, Dart AM, Duffy SJ. Usefulness of transient and persistent no reflow to predict adverse clinical outcomes following percutaneous coronary intervention. The American Journal of Cardiology. 109: 478-85. PMID 22176999 DOI: 10.1016/j.amjcard.2011.09.037  0.093
2012 Fang H, Clark DJ, Hayes JJ. DNA and nucleosomes direct distinct folding of a linker histone H1 C-terminal domain. Nucleic Acids Research. 40: 1475-84. PMID 22021384 DOI: 10.1093/Nar/Gkr866  0.043
2012 Reid KF, Doros G, Clark DJ, Patten C, Carabello RJ, Cloutier GJ, Phillips EM, Krivickas LS, Frontera WR, Fielding RA. Muscle power failure in mobility-limited older adults: preserved single fiber function despite lower whole muscle size, quality and rate of neuromuscular activation. European Journal of Applied Physiology. 112: 2289-301. PMID 22005960 DOI: 10.1007/S00421-011-2200-0  0.04
2012 Clark DJ, Fielding RA. Neuromuscular contributions to age-related weakness. The Journals of Gerontology. Series a, Biological Sciences and Medical Sciences. 67: 41-7. PMID 21415261 DOI: 10.1093/Gerona/Glr041  0.069
2011 Pieper R, Zhang Q, Clark DJ, Huang ST, Suh MJ, Braisted JC, Payne SH, Fleischmann RD, Peterson SN, Tzipori S. Characterizing the Escherichia coli O157:H7 proteome including protein associations with higher order assemblies. Plos One. 6: e26554. PMID 22087229 DOI: 10.1371/Journal.Pone.0026554  0.05
2011 Darcy DC, Lewis ET, Ormond KE, Clark DJ, Trafton JA. Practical considerations to guide development of access controls and decision support for genetic information in electronic medical records. Bmc Health Services Research. 11: 294. PMID 22047175 DOI: 10.1186/1472-6963-11-294  0.216
2011 Cole HA, Howard BH, Clark DJ. Activation-induced disruption of nucleosome position clusters on the coding regions of Gcn4-dependent genes extends into neighbouring genes. Nucleic Acids Research. 39: 9521-35. PMID 21880600 DOI: 10.1093/nar/gkr643  0.076
2011 Yan BP, Ajani AE, Clark DJ, Duffy SJ, Andrianopoulos N, Brennan AL, Loane P, Reid CM. Recent trends in Australian percutaneous coronary intervention practice: insights from the Melbourne Interventional Group registry. The Medical Journal of Australia. 195: 122-7. PMID 21806529  0.062
2011 Cole HA, Howard BH, Clark DJ. The centromeric nucleosome of budding yeast is perfectly positioned and covers the entire centromere. Proceedings of the National Academy of Sciences of the United States of America. 108: 12687-92. PMID 21768332 DOI: 10.1073/pnas.1104978108  0.058
2011 Jang JH, Liang D, Kido K, Sun Y, Clark DJ, Brennan TJ. Increased local concentration of complement C5a contributes to incisional pain in mice. Journal of Neuroinflammation. 8: 80. PMID 21736743 DOI: 10.1186/1742-2094-8-80  0.293
2011 Kautz SA, Bowden MG, Clark DJ, Neptune RR. Comparison of motor control deficits during treadmill and overground walking poststroke. Neurorehabilitation and Neural Repair. 25: 756-65. PMID 21636831 DOI: 10.1177/1545968311407515  0.05
2011 Lu KJ, Yan BP, Ajani AE, Wilson WM, Duffy SJ, Gurvitch R, Clark DJ, Brennan A, Reid C, Andrianopoulos N, Krum H. Impact of concomitant heart failure on outcomes in patients undergoing percutaneous coronary interventions: analysis of the Melbourne Interventional Group registry. European Journal of Heart Failure. 13: 416-22. PMID 21307036 DOI: 10.1093/eurjhf/hfr003  0.066
2011 Andrianopoulos N, Dinh D, Duffy SJ, Clark DJ, Brennan AL, Chan W, Shardey GC, Smith JA, Yap CH, Buxton BF, Ajani AE, Reid CM. Quality control activities associated with registries in interventional cardiology and surgery. Heart, Lung & Circulation. 20: 180-6. PMID 21277829 DOI: 10.1016/j.hlc.2010.11.001  0.052
2011 Gaykalova DA, Nagarajavel V, Bondarenko VA, Bartholomew B, Clark DJ, Studitsky VM. A polar barrier to transcription can be circumvented by remodeler-induced nucleosome translocation. Nucleic Acids Research. 39: 3520-8. PMID 21245049 DOI: 10.1093/Nar/Gkq1273  0.061
2011 Eriksson PR, Ganguli D, Clark DJ. Spt10 and Swi4 control the timing of histone H2A/H2B gene activation in budding yeast. Molecular and Cellular Biology. 31: 557-72. PMID 21115727 DOI: 10.1128/MCB.00909-10  0.064
2011 Chan W, Clark DJ, Ajani AE, Yap CH, Andrianopoulos N, Brennan AL, Dinh DT, Shardey GC, Smith JA, Reid CM, Duffy SJ. Progress towards a National Cardiac Procedure Database--development of the Australasian Society of Cardiac and Thoracic Surgeons (ASCTS) and Melbourne Interventional Group (MIG) registries. Heart, Lung & Circulation. 20: 10-8. PMID 21051283 DOI: 10.1016/j.hlc.2010.10.002  0.063
2011 DeLorey TM, Sahbaie P, Hashemi E, Li WW, Salehi A, Clark DJ. Somatosensory and sensorimotor consequences associated with the heterozygous disruption of the autism candidate gene, Gabrb3. Behavioural Brain Research. 216: 36-45. PMID 20699105 DOI: 10.1016/J.Bbr.2010.06.032  0.092
2011 Al-Fiadh AH, Andrianopoulos N, Farouque O, Yan BP, Duffy SJ, Charter K, Tongyoo S, New G, Yip T, Brennan A, Proimos G, Reid CM, Ajani AE, Clark DJ. Contemporary outcomes in women undergoing percutaneous coronary intervention for acute coronary syndromes. International Journal of Cardiology. 151: 195-9. PMID 20538357 DOI: 10.1016/j.ijcard.2010.05.018  0.069
2010 Clark DJ. Reclaiming endodontics and reinventing restorative, part 2. Dentistry Today. 29: 156, 158-61. PMID 21133033  0.028
2010 Catusse J, Leick M, Groch M, Clark DJ, Buchner MV, Zirlik K, Burger M. Role of the atypical chemoattractant receptor CRAM in regulating CCL19 induced CCR7 responses in B-cell chronic lymphocytic leukemia. Molecular Cancer. 9: 297. PMID 21092185 DOI: 10.1186/1476-4598-9-297  0.079
2010 Clark DJ. Reclaiming endodontics and reinventing restorative, Part I. Dentistry Today. 29: 112, 114, 116 passim. PMID 21086800  0.018
2010 Carvalho B, Clark DJ, Yeomans DC, Angst MS. Continuous subcutaneous instillation of bupivacaine compared to saline reduces interleukin 10 and increases substance P in surgical wounds after cesarean delivery. Anesthesia and Analgesia. 111: 1452-9. PMID 20861424 DOI: 10.1213/Ane.0B013E3181F579De  0.244
2010 Lancefield T, Clark DJ, Andrianopoulos N, Brennan AL, Reid CM, Johns J, Freeman M, Charter K, Duffy SJ, Ajani AE, Proietto J, Farouque O. Is there an obesity paradox after percutaneous coronary intervention in the contemporary era? An analysis from a multicenter Australian registry. Jacc. Cardiovascular Interventions. 3: 660-8. PMID 20630460 DOI: 10.1016/j.jcin.2010.03.018  0.055
2010 Wu PC, Lang C, Hasson NK, Linder SH, Clark DJ. Opioid use in young veterans. Journal of Opioid Management. 6: 133-9. PMID 20481178 DOI: 10.5055/jom.2010.0013  0.12
2010 Trafton JA, Martins SB, Michel MC, Wang D, Tu SW, Clark DJ, Elliott J, Vucic B, Balt S, Clark ME, Sintek CD, Rosenberg J, Daniels D, Goldstein MK. Designing an automated clinical decision support system to match clinical practice guidelines for opioid therapy for chronic pain. Implementation Science : Is. 5: 26. PMID 20385018 DOI: 10.1186/1748-5908-5-26  0.333
2010 Clark DJ. Nucleosome positioning, nucleosome spacing and the nucleosome code. Journal of Biomolecular Structure & Dynamics. 27: 781-93. PMID 20232933 DOI: 10.1080/073911010010524945  0.058
2010 Farouque HM, Clark DJ. Percutaneous mitral valve leaflet repair for mitral regurgitation: NICE guidance. Heart (British Cardiac Society). 96: 385-7. PMID 20197362 DOI: 10.1136/hrt.2009.183269  0.01
2010 Suh MJ, Clark DJ, Parmer PP, Fleischmann RD, Peterson SN, Pieper R. Using chemical derivatization and mass spectrometric analysis to characterize the post-translationally modified Staphylococcus aureus surface protein G. Biochimica Et Biophysica Acta. 1804: 1394-404. PMID 20176147 DOI: 10.1016/J.Bbapap.2010.02.006  0.047
2010 Pieper R, Huang ST, Parmar PP, Clark DJ, Alami H, Fleischmann RD, Perry RD, Peterson SN. Proteomic analysis of iron acquisition, metabolic and regulatory responses of Yersinia pestis to iron starvation. Bmc Microbiology. 10: 30. PMID 20113483 DOI: 10.1186/1471-2180-10-30  0.019
2010 Clark DJ, Ting LH, Zajac FE, Neptune RR, Kautz SA. Merging of healthy motor modules predicts reduced locomotor performance and muscle coordination complexity post-stroke. Journal of Neurophysiology. 103: 844-57. PMID 20007501 DOI: 10.1152/Jn.00825.2009  0.053
2010 Wang L, Shi X, Zhao R, Halloran BP, Clark DJ, Jacobs CR, Kingery WS. Calcitonin-gene-related peptide stimulates stromal cell osteogenic differentiation and inhibits RANKL induced NF-kappaB activation, osteoclastogenesis and bone resorption. Bone. 46: 1369-79. PMID 19962460 DOI: 10.1016/J.Bone.2009.11.029  0.211
2010 McGowan CP, Neptune RR, Clark DJ, Kautz SA. Modular control of human walking: Adaptations to altered mechanical demands. Journal of Biomechanics. 43: 412-9. PMID 19879583 DOI: 10.1016/J.Jbiomech.2009.10.009  0.066
2009 Yan BP, Clark DJ, Jaff MR, Kiernan TJ, Schainfeld RM, Lessio S, Rosenfield K. Carotid duplex ultrasound velocity measurements versus intravascular ultrasound in detecting carotid in-stent restenosis. Circulation. Cardiovascular Interventions. 2: 438-43. PMID 20031754 DOI: 10.1161/CIRCINTERVENTIONS.109.857276  0.033
2009 Pieper R, Zhang Q, Parmar PP, Huang ST, Clark DJ, Alami H, Donohue-Rolfe A, Fleischmann RD, Peterson SN, Tzipori S. The Shigella dysenteriae serotype 1 proteome, profiled in the host intestinal environment, reveals major metabolic modifications and increased expression of invasive proteins. Proteomics. 9: 5029-45. PMID 19813213 DOI: 10.1002/pmic.200900196  0.057
2009 Kim H, Clark D, Dionne RA. Genetic contributions to clinical pain and analgesia: avoiding pitfalls in genetic research. The Journal of Pain : Official Journal of the American Pain Society. 10: 663-93. PMID 19559388 DOI: 10.1016/J.Jpain.2009.04.001  0.358
2009 LaCroix-Fralish ML, Mo G, Smith SB, Sotocinal SG, Ritchie J, Austin JS, Melmed K, Schorscher-Petcu A, Laferriere AC, Lee TH, Romanovsky D, Liao G, Behlke MA, Clark DJ, Peltz G, et al. The beta3 subunit of the Na+,K+-ATPase mediates variable nociceptive sensitivity in the formalin test. Pain. 144: 294-302. PMID 19464798 DOI: 10.1016/J.Pain.2009.04.028  0.293
2009 Wei T, Li WW, Guo TZ, Zhao R, Wang L, Clark DJ, Oaklander AL, Schmelz M, Kingery WS. Post-junctional facilitation of Substance P signaling in a tibia fracture rat model of complex regional pain syndrome type I. Pain. 144: 278-86. PMID 19464118 DOI: 10.1016/J.Pain.2009.04.020  0.273
2009 Wang L, Zhao R, Shi X, Wei T, Halloran BP, Clark DJ, Jacobs CR, Kingery WS. Substance P stimulates bone marrow stromal cell osteogenic activity, osteoclast differentiation, and resorption activity in vitro. Bone. 45: 309-20. PMID 19379851 DOI: 10.1016/J.Bone.2009.04.203  0.201
2009 Clark DJ, Leblanc B. Analysis of DNA supercoiling induced by DNA-protein interactions. Methods in Molecular Biology (Clifton, N.J.). 543: 523-35. PMID 19378184 DOI: 10.1007/978-1-60327-015-1_30  0.046
2009 Wei T, Sabsovich I, Guo TZ, Shi X, Zhao R, Li W, Geis C, Sommer C, Kingery WS, Clark DJ. Pentoxifylline attenuates nociceptive sensitization and cytokine expression in a tibia fracture rat model of complex regional pain syndrome. European Journal of Pain (London, England). 13: 253-62. PMID 18554967 DOI: 10.1016/J.Ejpain.2008.04.014  0.329
2008 Carvalho B, Clark DJ, Yeomans D, Angst MS. Collecting and measuring nociceptive and inflammatory mediators in surgical wounds. Journal of Visualized Experiments : Jove. PMID 19078937 DOI: 10.3791/962  0.271
2008 Liao G, Zhang X, Clark DJ, Peltz G. A genomic "roadmap" to "better" drugs. Drug Metabolism Reviews. 40: 225-39. PMID 18464044 DOI: 10.1080/03602530801952815  0.213
2008 Carvalho B, Clark DJ, Angst MS. Local and systemic release of cytokines, nerve growth factor, prostaglandin E2, and substance P in incisional wounds and serum following cesarean delivery. The Journal of Pain : Official Journal of the American Pain Society. 9: 650-7. PMID 18394968 DOI: 10.1016/J.Jpain.2008.02.004  0.252
2008 Sabsovich I, Guo TZ, Wei T, Zhao R, Li X, Clark DJ, Geis C, Sommer C, Kingery WS. TNF signaling contributes to the development of nociceptive sensitization in a tibia fracture model of complex regional pain syndrome type I. Pain. 137: 507-19. PMID 18035493 DOI: 10.1016/J.Pain.2007.10.013  0.285
2007 Elliott J, Chapman J, Clark DJ. Videoconferencing for a veteran's pain management follow-up clinic. Pain Management Nursing : Official Journal of the American Society of Pain Management Nurses. 8: 35-46. PMID 17336868 DOI: 10.1016/J.Pmn.2006.12.005  0.33
2007 Mendiratta G, Eriksson PR, Clark DJ. Cooperative binding of the yeast Spt10p activator to the histone upstream activating sequences is mediated through an N-terminal dimerization domain. Nucleic Acids Research. 35: 812-21. PMID 17202156 DOI: 10.1093/nar/gkl1079  0.043
2006 Liang DY, Liao G, Lighthall GK, Peltz G, Clark DJ. Genetic variants of the P-glycoprotein gene Abcb1b modulate opioid-induced hyperalgesia, tolerance and dependence. Pharmacogenetics and Genomics. 16: 825-35. PMID 17047491 DOI: 10.1097/01.Fpc.0000236321.94271.F8  0.27
2006 Kim Y, McLaughlin N, Lindstrom K, Tsukiyama T, Clark DJ. Activation of Saccharomyces cerevisiae HIS3 results in Gcn4p-dependent, SWI/SNF-dependent mobilization of nucleosomes over the entire gene. Molecular and Cellular Biology. 26: 8607-22. PMID 16982689 DOI: 10.1128/Mcb.00678-06  0.077
2006 Clark DJ, Shen CH. Mapping histone modifications by nucleosome immunoprecipitation. Methods in Enzymology. 410: 416-30. PMID 16938564 DOI: 10.1016/S0076-6879(06)10021-X  0.053
2006 Tong W, Kulaeva OI, Clark DJ, Lutter LC. Topological analysis of plasmid chromatin from yeast and mammalian cells. Journal of Molecular Biology. 361: 813-22. PMID 16890953 DOI: 10.1016/j.jmb.2006.07.015  0.069
2006 Mendiratta G, Eriksson PR, Shen CH, Clark DJ. The DNA-binding domain of the yeast Spt10p activator includes a zinc finger that is homologous to foamy virus integrase. The Journal of Biological Chemistry. 281: 7040-8. PMID 16415340 DOI: 10.1074/jbc.M511416200  0.047
2006 Chu LF, Clark DJ, Angst MS. Opioid tolerance and hyperalgesia in chronic pain patients after one month of oral morphine therapy: a preliminary prospective study. The Journal of Pain : Official Journal of the American Pain Society. 7: 43-8. PMID 16414554 DOI: 10.1016/J.Jpain.2005.08.001  0.366
2005 Eriksson PR, Mendiratta G, McLaughlin NB, Wolfsberg TG, Mariño-Ramírez L, Pompa TA, Jainerin M, Landsman D, Shen CH, Clark DJ. Global regulation by the yeast Spt10 protein is mediated through chromatin structure and the histone upstream activating sequence elements. Molecular and Cellular Biology. 25: 9127-37. PMID 16199888 DOI: 10.1128/Mcb.25.20.9127-9137.2005  0.069
2004 Kim Y, Shen CH, Clark DJ. Purification and nucleosome mapping analysis of native yeast plasmid chromatin. Methods (San Diego, Calif.). 33: 59-67. PMID 15039088 DOI: 10.1016/j.ymeth.2003.10.021  0.053
2004 Chu L, Angst M, Clark D. Opioids in non-cancer pain The Journal of Pain. 5: S73. DOI: 10.1016/J.Jpain.2004.02.259  0.339
2003 Angst MS, Koppert W, Pahl I, Clark DJ, Schmelz M. Short-term infusion of the mu-opioid agonist remifentanil in humans causes hyperalgesia during withdrawal. Pain. 106: 49-57. PMID 14581110 DOI: 10.1016/S0304-3959(03)00276-8  0.266
2002 Kim Y, Clark DJ. SWI/SNF-dependent long-range remodeling of yeast HIS3 chromatin. Proceedings of the National Academy of Sciences of the United States of America. 99: 15381-6. PMID 12432091 DOI: 10.1073/pnas.242536699  0.086
2002 Shen CH, Leblanc BP, Neal C, Akhavan R, Clark DJ. Targeted histone acetylation at the yeast CUP1 promoter requires the transcriptional activator, the TATA boxes, and the putative histone acetylase encoded by SPT10. Molecular and Cellular Biology. 22: 6406-16. PMID 12192040 DOI: 10.1128/MCB.22.18.6406-6416.2002  0.056
2002 Ibinson JW, Small RH, Schmalbrock P, Clark D. The Importance of Echo Time in FMRI of Pain Anesthesiology. 96: A866. DOI: 10.1097/00000542-200209002-00866  0.342
2000 Clark D, Li X. Room 310, 10/17/2000 3: 30 PM - 5: 00 PM (PD) Chronic Opioid Administration Alters Pain Thresholds in a Rat Model of Incisional Pain  Anesthesiology. 93: A-971. DOI: 10.1097/00000542-200009001-00971  0.341
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