Fredrik Vannberg - Publications

Affiliations: 
Biology Georgia Institute of Technology, Atlanta, GA 

30 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any innacuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Talundzic E, Ravishankar S, Kelly J, Patel D, Plucinski M, Schmedes S, Ljolje D, Clemons B, Madison-Antenucci S, Arguin PM, Lucchi N, Vannberg F, Udhayakumar V. A next-generation sequencing and bioinformatics protocol for Malaria drug Resistance marker Surveillance (MaRS). Antimicrobial Agents and Chemotherapy. PMID 29439965 DOI: 10.1128/AAC.02474-17  0.68
2017 Audano P, Ravishankar S, Vannberg F. Mapping-free variant calling using haplotype reconstruction from k-mer frequencies. Bioinformatics (Oxford, England). PMID 29186321 DOI: 10.1093/bioinformatics/btx753  1
2017 Srinivasan S, Su M, Ravishankar S, Moore J, Head P, Dixon JB, Vannberg F. TLR-exosomes exhibit distinct kinetics and effector function. Scientific Reports. 7: 41623. PMID 28290538 DOI: 10.1038/srep41623  1
2017 Talundzic E, Ravishankar S, Nayak V, Patel DS, Olsen C, Sheth M, Batra D, Loparev V, Vannberg FO, Udhayakumar V, Barnwell JW. First Full Draft Genome Sequence of Plasmodium brasilianum. Genome Announcements. 5. PMID 28183758 DOI: 10.1128/genomeA.01566-16  0.68
2016 Srinivasan S, Vannberg FO, Dixon JB. Lymphatic transport of exosomes as a rapid route of information dissemination to the lymph node. Scientific Reports. 6: 24436. PMID 27087234 DOI: 10.1038/srep24436  1
2016 Lie L, Biliya S, Vannberg F, Wartell RM. Ligation of RNA Oligomers by the Schistosoma mansoni Hammerhead Ribozyme in Frozen Solution. Journal of Molecular Evolution. PMID 26897022 DOI: 10.1007/s00239-016-9729-9  1
2016 Etienne KA, Roe CC, Smith RM, Vallabhaneni S, Duarte C, Escadon P, Castaneda E, Gomez BL, de Bedout C, López LF, Salas V, Hederra LM, Fernandez J, Pidal P, Hormazabel JC, ... ... Vannberg FO, et al. Whole-Genome Sequencing to Determine Origin of Multinational Outbreak of Sarocladium kiliense Bloodstream Infections. Emerging Infectious Diseases. 22. PMID 26891230 DOI: 10.3201/eid2203.151193  1
2014 Audano P, Vannberg F. KAnalyze: a fast versatile pipelined k-mer toolkit. Bioinformatics (Oxford, England). 30: 2070-2. PMID 24642064 DOI: 10.1093/bioinformatics/btu152  1
2013 McLaren PJ, Coulonges C, Ripke S, van den Berg L, Buchbinder S, Carrington M, Cossarizza A, Dalmau J, Deeks SG, Delaneau O, De Luca A, Goedert JJ, Haas D, Herbeck JT, Kathiresan S, ... ... Vannberg F, et al. Association study of common genetic variants and HIV-1 acquisition in 6,300 infected cases and 7,200 controls. Plos Pathogens. 9: e1003515. PMID 23935489 DOI: 10.1371/journal.ppat.1003515  1
2013 Grossman SR, Andersen KG, Shlyakhter I, Tabrizi S, Winnicki S, Yen A, Park DJ, Griesemer D, Karlsson EK, Wong SH, Cabili M, Adegbola RA, Bamezai RN, Hill AV, Vannberg FO, et al. Identifying recent adaptations in large-scale genomic data. Cell. 152: 703-13. PMID 23415221 DOI: 10.1016/j.cell.2013.01.035  1
2012 Sirugo G, Edwards DR, Ryckman KK, Bisseye C, White MJ, Kebbeh B, Morris GA, Adegbola RA, Tacconelli A, Predazzi IM, Novelli G, Vannberg FO, Odunsi K, Page GP, Williams SM. PTX3 genetic variation and dizygotic twinning in the Gambia: could pleiotropy with innate immunity explain common dizygotic twinning in Africa? Annals of Human Genetics. 76: 454-63. PMID 22834944 DOI: 10.1111/j.1469-1809.2012.00723.x  1
2012 Fairfax BP, Makino S, Radhakrishnan J, Plant K, Leslie S, Dilthey A, Ellis P, Langford C, Vannberg FO, Knight JC. Genetics of gene expression in primary immune cells identifies cell type-specific master regulators and roles of HLA alleles. Nature Genetics. 44: 502-10. PMID 22446964 DOI: 10.1038/ng.2205  1
2012 Thye T, Owusu-Dabo E, Vannberg FO, van Crevel R, Curtis J, Sahiratmadja E, Balabanova Y, Ehmen C, Muntau B, Ruge G, Sievertsen J, Gyapong J, Nikolayevskyy V, Hill PC, Sirugo G, et al. Common variants at 11p13 are associated with susceptibility to tuberculosis. Nature Genetics. 44: 257-9. PMID 22306650 DOI: 10.1038/ng.1080  1
2011 Vannberg FO, Chapman SJ, Hill AV. Human genetic susceptibility to intracellular pathogens. Immunological Reviews. 240: 105-16. PMID 21349089 DOI: 10.1111/j.1600-065X.2010.00996.x  1
2011 Fairfax BP, Davenport EE, Makino S, Hill AV, Vannberg FO, Knight JC. A common haplotype of the TNF receptor 2 gene modulates endotoxin tolerance. Journal of Immunology (Baltimore, Md. : 1950). 186: 3058-65. PMID 21282507 DOI: 10.4049/jimmunol.1001791  1
2010 Chapman SJ, Khor CC, Vannberg FO, Rautanen A, Walley A, Segal S, Moore CE, Davies RJ, Day NP, Peshu N, Crook DW, Berkley JA, Williams TN, Scott JA, Hill AV. Common NFKBIL2 polymorphisms and susceptibility to pneumococcal disease: a genetic association study. Critical Care (London, England). 14: R227. PMID 21171993 DOI: 10.1186/cc9377  1
2010 Kubarenko AV, Ranjan S, Rautanen A, Mills TC, Wong S, Vannberg F, Neumaier M, Bekeredjian-Ding I, Hill AV, Ahmad-Nejad P, Weber AN. A naturally occurring variant in human TLR9, P99L, is associated with loss of CpG oligonucleotide responsiveness. The Journal of Biological Chemistry. 285: 36486-94. PMID 20843814 DOI: 10.1074/jbc.M110.117200  0.56
2010 Thye T, Vannberg FO, Wong SH, Owusu-Dabo E, Osei I, Gyapong J, Sirugo G, Sisay-Joof F, Enimil A, Chinbuah MA, Floyd S, Warndorff DK, Sichali L, Malema S, Crampin AC, et al. Genome-wide association analyses identifies a susceptibility locus for tuberculosis on chromosome 18q11.2. Nature Genetics. 42: 739-41. PMID 20694014 DOI: 10.1038/ng.639  1
2010 Wong SH, Gochhait S, Malhotra D, Pettersson FH, Teo YY, Khor CC, Rautanen A, Chapman SJ, Mills TC, Srivastava A, Rudko A, Freidin MB, Puzyrev VP, Ali S, Aggarwal S, ... ... Vannberg FO, et al. Leprosy and the adaptation of human toll-like receptor 1. Plos Pathogens. 6: e1000979. PMID 20617178 DOI: 10.1371/journal.ppat.1000979  1
2010 Khor CC, Vannberg FO, Chapman SJ, Guo H, Wong SH, Walley AJ, Vukcevic D, Rautanen A, Mills TC, Chang KC, Kam KM, Crampin AC, Ngwira B, Leung CC, Tam CM, et al. CISH and susceptibility to infectious diseases. The New England Journal of Medicine. 362: 2092-101. PMID 20484391 DOI: 10.1056/NEJMoa0905606  1
2010 Wong SH, Hill AV, Vannberg FO. Genomewide association study of leprosy. The New England Journal of Medicine. 362: 1446-7; author reply. PMID 20393182 DOI: 10.1056/NEJMc1001451  0.56
2010 Wong SH, Vannberg FO, Spencer AJ, van der Weyden L, Hill AV, Wyllie DH. Comment on "CRTAM confers late-stage activation of CD8+ T cells to regulate retention within lymph node". Journal of Immunology (Baltimore, Md. : 1950). 184: 4052-3. PMID 20368284 DOI: 10.4049/jimmunol.1090017  0.56
2010 Chapman SJ, Vannberg FO, Khor CC, Rautanen A, Maskell NA, Davies CW, Moore CE, Day NP, Crook DW, Davies RJ, Hill AV. Mannose-binding lectin genotypes: lack of association with susceptibility to thoracic empyema. Bmc Medical Genetics. 11: 5. PMID 20078874 DOI: 10.1186/1471-2350-11-5  0.56
2010 Fairfax BP, Vannberg FO, Radhakrishnan J, Hakonarson H, Keating BJ, Hill AV, Knight JC. An integrated expression phenotype mapping approach defines common variants in LEP, ALOX15 and CAPNS1 associated with induction of IL-6. Human Molecular Genetics. 19: 720-30. PMID 19942621 DOI: 10.1093/hmg/ddp530  1
2008 Vannberg FO, Chapman SJ, Khor CC, Tosh K, Floyd S, Jackson-Sillah D, Crampin A, Sichali L, Bah B, Gustafson P, Aaby P, McAdam KP, Bah-Sow O, Lienhardt C, Sirugo G, et al. CD209 genetic polymorphism and tuberculosis disease. Plos One. 3: e1388. PMID 18167547 DOI: 10.1371/journal.pone.0001388  0.56
2007 Chapman SJ, Khor CC, Vannberg FO, Frodsham A, Walley A, Maskell NA, Davies CW, Segal S, Moore CE, Gillespie SH, Denny P, Day NP, Crook DW, Davies RJ, Hill AV. IkappaB genetic polymorphisms and invasive pneumococcal disease. American Journal of Respiratory and Critical Care Medicine. 176: 181-7. PMID 17463416 DOI: 10.1164/rccm.200702-169OC  0.56
2007 Chapman SJ, Vannberg FO, Khor CC, Segal S, Moore CE, Knox K, Day NP, Davies RJ, Crook DW, Hill AV. Functional polymorphisms in the FCN2 gene are not associated with invasive pneumococcal disease. Molecular Immunology. 44: 3267-70. PMID 17382393 DOI: 10.1016/j.molimm.2006.04.013  0.56
2007 Khor CC, Chapman SJ, Vannberg FO, Dunne A, Murphy C, Ling EY, Frodsham AJ, Walley AJ, Kyrieleis O, Khan A, Aucan C, Segal S, Moore CE, Knox K, Campbell SJ, et al. A Mal functional variant is associated with protection against invasive pneumococcal disease, bacteremia, malaria and tuberculosis. Nature Genetics. 39: 523-8. PMID 17322885 DOI: 10.1038/ng1976  1
2006 Chapman SJ, Khor CC, Vannberg FO, Maskell NA, Davies CW, Hedley EL, Segal S, Moore CE, Knox K, Day NP, Gillespie SH, Crook DW, Davies RJ, Hill AV. PTPN22 and invasive bacterial disease. Nature Genetics. 38: 499-500. PMID 16642008 DOI: 10.1038/ng0506-499  0.56
2005 Park J, Hu Y, Murthy TV, Vannberg F, Shen B, Rolfs A, Hutti JE, Cantley LC, Labaer J, Harlow E, Brizuela L. Building a human kinase gene repository: bioinformatics, molecular cloning, and functional validation. Proceedings of the National Academy of Sciences of the United States of America. 102: 8114-9. PMID 15928075 DOI: 10.1073/pnas.0503141102  1
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