Matthew Hudson - Publications

Affiliations: 
Crop Sciences University of Illinois, Urbana-Champaign, Urbana-Champaign, IL 

25 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Liu X, Wickland DP, Lin Z, Liu Q, Borges Dos Santos L, Hudson KA, Hudson ME. Promoter deletion in the soybean Compact mutant leads to overexpression of a gene with homology to the C20-GA 2-oxidase family. Journal of Experimental Botany. PMID 37551820 DOI: 10.1093/jxb/erad267  0.309
2022 Yoshihara T, Miller ND, Rabanal FA, Myles H, Kwak IY, Broman KW, Sadkhin B, Baxter I, Dilkes BP, Hudson ME, Spalding EP. Leveraging orthology within maize and Arabidopsis QTL to identify genes affecting natural variation in gravitropism. Proceedings of the National Academy of Sciences of the United States of America. 119: e2212199119. PMID 36161933 DOI: 10.1073/pnas.2212199119  0.326
2016 Kumar I, Swaminathan K, Hudson K, Hudson ME. Evolutionary divergence of phytochrome protein function in Zea mays PIF3 signaling. Journal of Experimental Botany. PMID 27262126 DOI: 10.1093/jxb/erw217  0.315
2015 Li Q, Li Y, Moose SP, Hudson ME. Transposable elements, mRNA expression level and strand-specificity of small RNAs are associated with non-additive inheritance of gene expression in hybrid plants. Bmc Plant Biology. 15: 168. PMID 26139102 DOI: 10.1186/s12870-015-0549-7  0.301
2015 Hudson KA, Hudson ME. A classification of basic helix-loop-helix transcription factors of soybean. International Journal of Genomics. 2015: 603182. PMID 25763382 DOI: 10.1155/2015/603182  0.32
2014 Li Y, Varala K, Hudson ME. A survey of the small RNA population during far-red light-induced apical hook opening. Frontiers in Plant Science. 5: 156. PMID 24808898 DOI: 10.3389/Fpls.2014.00156  0.376
2012 Li Y, Varala K, Moose SP, Hudson ME. The inheritance pattern of 24 nt siRNA clusters in arabidopsis hybrids is influenced by proximity to transposable elements. Plos One. 7: e47043. PMID 23118865 DOI: 10.1371/Journal.Pone.0047043  0.321
2012 Zabala G, Campos E, Varala KK, Bloomfield S, Jones SI, Win H, Tuteja JH, Calla B, Clough SJ, Hudson M, Vodkin LO. Divergent patterns of endogenous small RNA populations from seed and vegetative tissues of Glycine max. Bmc Plant Biology. 12: 177. PMID 23031057 DOI: 10.1186/1471-2229-12-177  0.315
2012 Swaminathan K, Chae WB, Mitros T, Varala K, Xie L, Barling A, Glowacka K, Hall M, Jezowski S, Ming R, Hudson M, Juvik JA, Rokhsar DS, Moose SP. A framework genetic map for Miscanthus sinensis from RNAseq-based markers shows recent tetraploidy. Bmc Genomics. 13: 142. PMID 22524439 DOI: 10.1186/1471-2164-13-142  0.32
2011 Varala K, Swaminathan K, Li Y, Hudson ME. Rapid genotyping of soybean cultivars using high throughput sequencing. Plos One. 6: e24811. PMID 21949759 DOI: 10.1371/Journal.Pone.0024811  0.332
2011 Li Y, Swaminathan K, Hudson ME. Rapid, organ-specific transcriptional responses to light regulate photomorphogenic development in dicot seedlings. Plant Physiology. 156: 2124-40. PMID 21653191 DOI: 10.1104/pp.111.179416  0.452
2009 Kikis EA, Oka Y, Hudson ME, Nagatani A, Quail PH. Residues clustered in the light-sensing knot of phytochrome B are necessary for conformer-specific binding to signaling partner PIF3. Plos Genetics. 5: e1000352. PMID 19165330 DOI: 10.1371/Journal.Pgen.1000352  0.74
2008 Craig JP, Bekal S, Hudson M, Domier L, Niblack T, Lambert KN. Analysis of a horizontally transferred pathway involved in vitamin B6 biosynthesis from the soybean cyst nematode Heterodera glycines. Molecular Biology and Evolution. 25: 2085-98. PMID 18586696 DOI: 10.1093/Molbev/Msn141  0.384
2008 Kaczorowski KA, Kim K, Diers BW, Hudson ME. Microarray‐Based Genetic Mapping Using Soybean Near‐Isogenic Lines and Generation of SNP Markers in the Rag1 Aphid‐Resistance Interval The Plant Genome. 1. DOI: 10.3835/plantgenome2008.04.0207  0.613
2007 Walley JW, Coughlan S, Hudson ME, Covington MF, Kaspi R, Banu G, Harmer SL, Dehesh K. Mechanical stress induces biotic and abiotic stress responses via a novel cis-element. Plos Genetics. 3: 1800-12. PMID 17953483 DOI: 10.1371/Journal.Pgen.0030172  0.578
2004 Huq E, Al-Sady B, Hudson M, Kim C, Apel K, Quail PH. Phytochrome-interacting factor 1 is a critical bHLH regulator of chlorophyll biosynthesis. Science (New York, N.Y.). 305: 1937-41. PMID 15448264 DOI: 10.1126/Science.1099728  0.704
2004 Tepperman JM, Hudson ME, Khanna R, Zhu T, Chang SH, Wang X, Quail PH. Expression profiling of phyB mutant demonstrates substantial contribution of other phytochromes to red-light-regulated gene expression during seedling de-etiolation. The Plant Journal : For Cell and Molecular Biology. 38: 725-39. PMID 15144375 DOI: 10.1111/J.1365-313X.2004.02084.X  0.716
2003 Hudson ME, Quail PH. Identification of promoter motifs involved in the network of phytochrome A-regulated gene expression by combined analysis of genomic sequence and microarray data. Plant Physiology. 133: 1605-16. PMID 14681527 DOI: 10.1104/Pp.103.030437  0.543
2003 Anderson A, Hudson M, Chen W, Zhu T. Identification of nutrient partitioning genes participating in rice grain filling by singular value decomposition (SVD) of genome expression data. Bmc Genomics. 4: 26. PMID 12854976 DOI: 10.1186/1471-2164-4-26  0.358
2003 Hudson ME, Lisch DR, Quail PH. The FHY3 and FAR1 genes encode transposase-related proteins involved in regulation of gene expression by the phytochrome A-signaling pathway. The Plant Journal : For Cell and Molecular Biology. 34: 453-71. PMID 12753585 DOI: 10.1046/J.1365-313X.2003.01741.X  0.628
2000 Hudson ME. The genetics of phytochrome signalling in Arabidopsis Seminars in Cell and Developmental Biology. 11: 475-483. PMID 11145877 DOI: 10.1006/scdb.2000.0204  0.36
1999 Hudson M, Ringli C, Boylan MT, Quail PH. The FAR1 locus encodes a novel nuclear protein specific to phytochrome A signaling. Genes & Development. 13: 2017-27. PMID 10444599 DOI: 10.1101/Gad.13.15.2017  0.652
1999 Halliday KJ, Hudson M, Ni M, Qin M, Quail PH. poc1: an Arabidopsis mutant perturbed in phytochrome signaling because of a T DNA insertion in the promoter of PIF3, a gene encoding a phytochrome-interacting bHLH protein. Proceedings of the National Academy of Sciences of the United States of America. 96: 5832-7. PMID 10318970 DOI: 10.1073/Pnas.96.10.5832  0.753
1998 Hudson M, Smith H. The phytochrome B encoded by the HLG locus of Nicotiana plumbaginifolia is required for detection of photoperiod: hlg mutants show altered regulation of flowering and circadian movement The Plant Journal. 15: 281-287. DOI: 10.1046/J.1365-313X.1998.00198.X  0.33
1997 Hudson M, Robson PR, Kraepiel Y, Caboche M, Smith H. Nicotiana plumbaginifolia hlg mutants have a mutation in a PHYB-type phytochrome gene: they have elongated hypocotyls in red light, but are not elongated as adult plants. The Plant Journal : For Cell and Molecular Biology. 12: 1091-101. PMID 9418050 DOI: 10.1046/J.1365-313X.1997.12051091.X  0.399
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