☰

Yu-Shan Lin - Publications

Affiliations: 
Department of Chemistry Tufts University, Boston 
Tree Info Similar researchers PubMed Report error

32 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Chiou SL, Chen YJ, Lee CT, Ho MN, Miao J, Kuo PC, Hsu CC, Lin YS, Chu J. A Boron-Dependent Antibiotic Derived from a Calcium-Dependent Antibiotic. Angewandte Chemie (International Ed. in English). e202317522. PMID 38085688 DOI: 10.1002/anie.202317522  0.463
2021 Damjanovic J, Miao J, Huang H, Lin YS. Elucidating Solution Structures of Cyclic Peptides Using Molecular Dynamics Simulations. Chemical Reviews. PMID 33426882 DOI: 10.1021/acs.chemrev.0c01087  0.302
2019 Chen EA, Lin YS. Using synthetic peptides and recombinant collagen to understand DDR-collagen interactions. Biochimica Et Biophysica Acta. Molecular Cell Research. PMID 30880148 DOI: 10.1016/J.Bbamcr.2019.03.005  0.358
2019 Cummings AE, Miao J, Slough DP, McHugh SM, Kritzer JA, Lin YS. β-Branched Amino Acids Stabilize Specific Conformations of Cyclic Hexapeptides. Biophysical Journal. PMID 30661666 DOI: 10.1016/J.Bpj.2018.12.015  0.378
2018 Qiu Y, Poppleton E, Mekkat A, Yu H, Banerjee S, Wiley SE, Dixon JE, Kaplan DL, Lin YS, Brodsky B. Enzymatic Phosphorylation of Ser in a Type I Collagen Peptide. Biophysical Journal. PMID 30527445 DOI: 10.1016/J.Bpj.2018.11.012  0.337
2018 Jafari MR, Yu H, Wickware JM, Lin YS, Derda R. Light-responsive bicyclic peptides. Organic & Biomolecular Chemistry. PMID 30067270 DOI: 10.1039/C7Ob03178E  0.353
2018 Qiu Y, Mekkat A, Yu H, Yigit S, Hamaia S, Farndale RW, Kaplan DL, Lin YS, Brodsky B. Collagen Gly missense mutations: Effect of residue identity on collagen structure and integrin binding. Journal of Structural Biology. PMID 29758270 DOI: 10.1016/J.Jsb.2018.05.003  0.365
2018 Slough DP, McHugh SM, Cummings AE, Dai P, Pentelute BL, Kritzer JA, Lin YS. Designing Well-Structured Cyclic Pentapeptides Based on Sequence-Structure Relationships. The Journal of Physical Chemistry. B. PMID 29589926 DOI: 10.1021/Acs.Jpcb.8B01747  0.392
2018 Slough DP, McHugh SM, Lin YS. Understanding and designing head-to-tail cyclic peptides. Biopolymers. PMID 29528114 DOI: 10.1002/Bip.23113  0.317
2017 Takemoto Y, Slough DP, Meinke G, Katnik C, Graziano ZA, Chidipi B, Reiser M, Alhadidy MM, Ramirez R, Salvador-Montañés O, Ennis S, Guerrero-Serna G, Haburcak M, Diehl C, Cuevas J, ... ... Lin YS, et al. Structural basis for the antiarrhythmic blockade of a potassium channel with a small molecule. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. PMID 29162702 DOI: 10.1096/Fj.201700349R  0.302
2017 Rogers JR, McHugh SM, Lin YS. Predictions for α-Helical Glycopeptide Design from Structural Bioinformatics Analysis. Journal of Chemical Information and Modeling. PMID 28953376 DOI: 10.1021/Acs.Jcim.7B00123  0.34
2017 Mong S, Cochran F, Yu H, Graziano ZA, Lin YS, Cochran JR, Pentelute BL. Heterochiral Knottin Protein: Folding and Solution Structure. Biochemistry. PMID 28952732 DOI: 10.1021/Acs.Biochem.7B00722  0.323
2017 Slough DP, Yu H, McHugh SM, Lin YS. Toward accurately modeling N-methylated cyclic peptides. Physical Chemistry Chemical Physics : Pccp. PMID 28155950 DOI: 10.1039/C6Cp07700E  0.366
2017 McHugh SM, Yu H, Slough DP, Lin YS. Mapping the sequence-structure relationships of simple cyclic hexapeptides. Physical Chemistry Chemical Physics : Pccp. PMID 28091629 DOI: 10.1039/C6Cp06192C  0.404
2016 Chhum P, Yu H, An B, Doyon BR, Lin YS, Brodsky B. Consequences of Glycine Mutations in the Fibronectin Binding Sequence of Collagen. The Journal of Biological Chemistry. PMID 27799304 DOI: 10.1074/Jbc.M116.753566  0.365
2016 McHugh SM, Rogers JR, Solomon SA, Yu H, Lin YS. Computational methods to design cyclic peptides. Current Opinion in Chemical Biology. 34: 95-102. PMID 27592259 DOI: 10.1016/J.Cbpa.2016.08.004  0.349
2016 Simon MD, Maki Y, Vinogradov AA, Zhang C, Yu H, Lin YS, Kajihara Y, Pentelute BL. D-amino acid scan of two small proteins. Journal of the American Chemical Society. PMID 27494078 DOI: 10.1021/Jacs.6B03765  0.302
2016 Yigit S, Yu H, An B, Hamaia S, Farndale RW, Kaplan DL, Lin YS, Brodsky B. Mapping the Effect of Gly Mutations in Collagen on α2β1 Integrin Binding. The Journal of Biological Chemistry. PMID 27432884 DOI: 10.1074/Jbc.M116.726182  0.332
2016 McHugh SM, Rogers JR, Yu H, Lin YS. Insights into how cyclic peptides switch conformation. Journal of Chemical Theory and Computation. PMID 27031286 DOI: 10.1021/Acs.Jctc.6B00193  0.375
2015 An B, Lin YS, Brodsky B. Collagen Interactions: Drug Design and Delivery. Advanced Drug Delivery Reviews. PMID 26631222 DOI: 10.1016/J.Addr.2015.11.013  0.322
2015 Yu H, Lin YS. Toward structure prediction of cyclic peptides. Physical Chemistry Chemical Physics : Pccp. 17: 4210-9. PMID 25566700 DOI: 10.1039/C4Cp04580G  0.375
2014 Quartararo JS, Eshelman MR, Peraro L, Yu H, Baleja JD, Lin YS, Kritzer JA. A bicyclic peptide scaffold promotes phosphotyrosine mimicry and cellular uptake. Bioorganic & Medicinal Chemistry. 22: 6387-91. PMID 25438762 DOI: 10.1016/J.Bmc.2014.09.050  0.385
2014 Baiz CR, Lin YS, Peng CS, Beauchamp KA, Voelz VA, Pande VS, Tokmakoff A. A molecular interpretation of 2D IR protein folding experiments with Markov state models. Biophysical Journal. 106: 1359-70. PMID 24655511 DOI: 10.1016/J.Bpj.2014.02.008  0.337
2014 Zou Y, Spokoyny AM, Zhang C, Simon MD, Yu H, Lin YS, Pentelute BL. Convergent diversity-oriented side-chain macrocyclization scan for unprotected polypeptides. Organic & Biomolecular Chemistry. 12: 566-73. PMID 24310320 DOI: 10.1039/C3Ob42168F  0.357
2013 Spokoyny AM, Zou Y, Ling JJ, Yu H, Lin YS, Pentelute BL. A perfluoroaryl-cysteine S(N)Ar chemistry approach to unprotected peptide stapling. Journal of the American Chemical Society. 135: 5946-9. PMID 23560559 DOI: 10.1021/Ja400119T  0.373
2012 Beauchamp KA, McGibbon R, Lin YS, Pande VS. Simple few-state models reveal hidden complexity in protein folding Proceedings of the National Academy of Sciences of the United States of America. 109: 17807-17813. PMID 22778442 DOI: 10.1073/Pnas.1201810109  0.305
2012 Lin YS, Bowman GR, Beauchamp KA, Pande VS. Investigating how peptide length and a pathogenic mutation modify the structural ensemble of amyloid beta monomer Biophysical Journal. 102: 315-324. PMID 22339868 DOI: 10.1016/J.Bpj.2011.12.002  0.394
2010 Reddy AS, Wang L, Lin YS, Ling Y, Chopra M, Zanni MT, Skinner JL, De Pablo JJ. Solution structures of rat amylin peptide: simulation, theory, and experiment. Biophysical Journal. 98: 443-51. PMID 20141758 DOI: 10.1016/J.Bpj.2009.10.029  0.351
2010 Woys AM, Lin YS, Reddy AS, Xiong W, de Pablo JJ, Skinner JL, Zanni MT. 2D IR line shapes probe ovispirin peptide conformation and depth in lipid bilayers. Journal of the American Chemical Society. 132: 2832-8. PMID 20136132 DOI: 10.1021/Ja9101776  0.348
2004 Wu K, Lin Y, Yeh Y, Chen C, Ahmed MO, Chou P, Hon Y. Design and synthesis of intramolecular hydrogen bonding systems. Their application in metal cation sensing based on excited-state proton transfer reaction Tetrahedron. 60: 11861-11868. DOI: 10.1016/J.Tet.2004.09.102  0.411
2004 Wu K, Cheng Y, Lin Y, Yeh Y, Pu S, Hu Y, Yu J, Chou P. ErratumErratum to: ‘Competitive intramolecular hydrogen bonding formation and excited-state proton transfer reaction in 1-[(diethylamino)-methyl]-2-hydroxy-3-naphthaldehyde’ [Chem. Phys. Lett. 382 (2004) 203–209] Chemical Physics Letters. 386: 479. DOI: 10.1016/J.Cplett.2004.01.100  0.413
2004 Wu K, Cheng Y, Lin Y, Yeh Y, Pu S, Hu Y, Yu J, Che P. Competitive intramolecular hydrogen bonding formation and excited-state proton transfer reaction in 1-[(diethylamino)-methyl]-2-hydroxy-3-naphthaldehyde Chemical Physics Letters. 384: 203-209. DOI: 10.1016/J.Cplett.2003.11.058  0.309
Show low-probability matches.