| Year |
Citation |
Score |
| 2022 |
Satpathi S, Endoh T, Sugimoto N. Applicability of the nearest-neighbour model for pseudoknot RNAs. Chemical Communications (Cambridge, England). PMID 35451430 DOI: 10.1039/d1cc07094k |
0.708 |
|
| 2022 |
McQuaid KT, Takahashi S, Baumgaertner L, Cardin DJ, Paterson NG, Hall JP, Sugimoto N, Cardin CJ. Ruthenium Polypyridyl Complex Bound to a Unimolecular Chair-Form G-Quadruplex. Journal of the American Chemical Society. PMID 35324198 DOI: 10.1021/jacs.2c00178 |
0.535 |
|
| 2021 |
Satpathi S, Endoh T, Podbevšek P, Plavec J, Sugimoto N. Transcriptome screening followed by integrated physicochemical and structural analyses for investigating RNA-mediated berberine activity. Nucleic Acids Research. PMID 33784402 DOI: 10.1093/nar/gkab189 |
0.715 |
|
| 2020 |
Takahashi S, Herdewijn P, Sugimoto N. Effect of Molecular Crowding on DNA Polymerase Reactions along Unnatural DNA Templates. Molecules (Basel, Switzerland). 25. PMID 32927591 DOI: 10.3390/Molecules25184120 |
0.377 |
|
| 2020 |
Banerjee D, Tateishi-Karimata H, Ohyama T, Ghosh S, Endoh T, Takahashi S, Sugimoto N. Improved nearest-neighbor parameters for the stability of RNA/DNA hybrids under a physiological condition. Nucleic Acids Research. PMID 32663294 DOI: 10.1093/Nar/Gkaa572 |
0.368 |
|
| 2020 |
Matsumoto S, Tateishi-Karimata H, Takahashi S, Ohyama T, Sugimoto N. Effect of Molecular Crowding on the Stability of RNA G-Quadruplexes with Various Numbers of Quartets and Lengths of Loops. Biochemistry. PMID 32578417 DOI: 10.1021/Acs.Biochem.0C00346 |
0.38 |
|
| 2020 |
Ghosh S, Takahashi S, Ohyama T, Endoh T, Tateishi-Karimata H, Sugimoto N. Nearest-neighbor parameters for predicting DNA duplex stability in diverse molecular crowding conditions. Proceedings of the National Academy of Sciences of the United States of America. PMID 32522884 DOI: 10.1073/Pnas.1920886117 |
0.368 |
|
| 2020 |
Endoh T, Sugimoto N. Signaling Aptamer Optimization through Selection Using RNA-Capturing Microsphere Particles. Analytical Chemistry. 92: 7955-7963. PMID 32363852 DOI: 10.1021/Acs.Analchem.0C01338 |
0.311 |
|
| 2020 |
Teng Y, Tateishi-Karimata H, Sugimoto N. RNA G-quadruplexes facilitate RNA accumulation in G-rich repeat expansions. Biochemistry. PMID 32301603 DOI: 10.1021/Acs.Biochem.0C00130 |
0.354 |
|
| 2020 |
Kovačič M, Podbevšek P, Tateishi-Karimata H, Takahashi S, Sugimoto N, Plavec J. Thrombin binding aptamer G-quadruplex stabilized by pyrene-modified nucleotides. Nucleic Acids Research. 48: 3975-3986. PMID 32095808 DOI: 10.1093/Nar/Gkaa118 |
0.379 |
|
| 2020 |
Tateishi-Karimata H, Banerjee D, Ohyama T, Matsumoto S, Miyoshi D, Nakano SI, Sugimoto N. Hydroxyl groups in cosolutes regulate the G-quadruplex topology of telomeric DNA. Biochemical and Biophysical Research Communications. PMID 32081425 DOI: 10.1016/J.Bbrc.2020.02.045 |
0.35 |
|
| 2020 |
Takahashi S, Bhattacharjee S, Ghosh S, Sugimoto N, Bhowmik S. Preferential targeting cancer-related i-motif DNAs by the plant flavonol fisetin for theranostics applications. Scientific Reports. 10: 2504. PMID 32054927 DOI: 10.1038/S41598-020-59343-2 |
0.316 |
|
| 2020 |
Tateishi-Karimata H, Ohyama T, Muraoka T, Tanaka S, Kinbara K, Sugimoto N. New Modified Deoxythymine with Dibranched Tetraethylene Glycol Stabilizes G-Quadruplex Structures. Molecules (Basel, Switzerland). 25. PMID 32041318 DOI: 10.3390/Molecules25030705 |
0.402 |
|
| 2020 |
Tateishi-Karimata H, Sugimoto N. Chemical biology of non-canonical structures of nucleic acids for therapeutic applications Chemical Communications. 56: 2379-2390. PMID 32022004 DOI: 10.1039/C9Cc09771F |
0.345 |
|
| 2020 |
Teng Y, Tateishi-Karimata H, Ohyama T, Sugimoto N. Effect of Potassium Concentration on Triplex Stability under Molecular Crowding Conditions. Molecules (Basel, Switzerland). 25. PMID 31963464 DOI: 10.3390/Molecules25020387 |
0.355 |
|
| 2020 |
Takahashi S, Okura H, Chilka P, Ghosh S, Sugimoto N. Molecular crowding induces primer extension by RNA polymerase through base stacking beyond Watson–Crick rules Rsc Advances. 10: 33052-33058. DOI: 10.1039/D0Ra06502A |
0.339 |
|
| 2019 |
Nakano S, Ayusawa T, Tanino Y, Sugimoto N. Stabilization of DNA Loop Structures by Large Cations. Journal of Physical Chemistry B. 123: 7687-7694. PMID 31465227 DOI: 10.1021/Acs.Jpcb.9B06074 |
0.417 |
|
| 2019 |
Takahashi S, Sugimoto N. Quantitative Analysis of Stall of Replicating DNA Polymerase by G-Quadruplex Formation. Methods of Molecular Biology. 2035: 257-274. PMID 31444755 DOI: 10.1007/978-1-4939-9666-7_15 |
0.391 |
|
| 2019 |
Endoh T, Sugimoto N. Conformational Dynamics of the RNA G-Quadruplex and its Effect on Translation Efficiency. Molecules. 24: 1613. PMID 31022854 DOI: 10.3390/Molecules24081613 |
0.363 |
|
| 2019 |
Endoh T, Ohyama T, Sugimoto N. RNA-Capturing Microsphere Particles (R-CAMPs) for Optimization of Functional Aptamers. Small (Weinheim An Der Bergstrasse, Germany). e1805062. PMID 30773785 DOI: 10.1002/Smll.201805062 |
0.329 |
|
| 2019 |
Ghosh S, Takahashi S, Endoh T, Tateishi-Karimata H, Hazra S, Sugimoto N. Validation of the nearest-neighbor model for Watson-Crick self-complementary DNA duplexes in molecular crowding condition. Nucleic Acids Research. PMID 30753582 DOI: 10.1093/Nar/Gkz071 |
0.363 |
|
| 2019 |
Takahashi S, Okura H, Sugimoto N. Bisubstrate Function of RNA Polymerases Triggered by Molecular Crowding Conditions. Biochemistry. 58: 1081-1093. PMID 30714721 DOI: 10.1021/Acs.Biochem.8B01204 |
0.346 |
|
| 2019 |
Takahashi S, Yamamoto J, Kitamura A, Kinjo M, Sugimoto N. Characterization of intracellular crowding environments with topology-based DNA quadruplex sensors. Analytical Chemistry. PMID 30624050 DOI: 10.1021/Acs.Analchem.8B04177 |
0.364 |
|
| 2019 |
Teng Y, Tateishi-Karimata H, Sugimoto N. C-Rich Sequence in a Non-Template DNA Strand Regulates Structure Change of G-Quadruplex in a Template Strand during Transcription Bulletin of the Chemical Society of Japan. 92: 572-577. DOI: 10.1246/Bcsj.20180298 |
0.392 |
|
| 2018 |
Takahashi S, Chelobanov B, Kim KT, Kim BH, Stetsenko D, Sugimoto N. Design and Properties of Ligand-Conjugated Guanine Oligonucleotides for Recovery of Mutated G-Quadruplexes. Molecules (Basel, Switzerland). 23. PMID 30563296 DOI: 10.3390/Molecules23123228 |
0.347 |
|
| 2018 |
Teng Y, Tateishi-Karimata H, Tsuruoka T, Sugimoto N. A Turn-On Detection of DNA Sequences by Means of Fluorescence of DNA-Templated Silver Nanoclusters via Unique Interactions of a Hydrated Ionic Liquid. Molecules (Basel, Switzerland). 23. PMID 30404141 DOI: 10.3390/Molecules23112889 |
0.349 |
|
| 2018 |
Qu X, Zhao C, Song H, Scott P, Zhao A, Ren J, Tateishi-Karimata H, Sugimoto N. Mirror-image Dependence: Targeting Enantiomeric G-quadruplex DNA by 10 Pairs of Triplex Metallohelices. Angewandte Chemie (International Ed. in English). PMID 30311333 DOI: 10.1002/Anie.201809207 |
0.377 |
|
| 2018 |
Endoh T, Sugimoto N. Co-Transcriptional Molecular Assembly Results in a Kinetically Controlled Irreversible RNA Conformational Switch. Analytical Chemistry. 90: 11193-11197. PMID 30198708 DOI: 10.1021/Acs.Analchem.8B03427 |
0.341 |
|
| 2018 |
Tateishi-Karimata H, Sugimoto N. Biological and nanotechnological applications using interactions between ionic liquids and nucleic acids. Biophysical Reviews. 10: 931-940. PMID 29687271 DOI: 10.1007/S12551-018-0422-7 |
0.306 |
|
| 2018 |
Rode AB, Endoh T, Sugimoto N. Crowding Shifts the FMN Recognition Mechanism of Riboswitch Aptamer from Conformational Selection to Induced Fit. Angewandte Chemie. 57: 6868-6872. PMID 29663603 DOI: 10.1002/Anie.201803052 |
0.322 |
|
| 2018 |
Trajkovski M, Endoh T, Tateishi-Karimata H, Ohyama T, Tanaka S, Plavec J, Sugimoto N. Pursuing origins of (poly)ethylene glycol-induced G-quadruplex structural modulations. Nucleic Acids Research. PMID 29648656 DOI: 10.1093/Nar/Gky250 |
0.403 |
|
| 2018 |
Nakano S, Yamaguchi D, Sugimoto N. Thermal stability and conformation of DNA and proteins under the confined condition in the matrix of hydrogels. Molecular Biology Reports. 45: 403-411. PMID 29626318 DOI: 10.1007/S11033-018-4174-Z |
0.389 |
|
| 2018 |
Takahashi S, Kim KT, Podbevsek P, Plavec J, Kim BH, Sugimoto N. Recovery of the formation and function of oxidized G-quadruplexes by a pyrene-modified guanine-tract. Journal of the American Chemical Society. PMID 29608858 DOI: 10.1021/Jacs.8B01577 |
0.316 |
|
| 2018 |
Sato N, Takahashi S, Tateishi-Karimata H, Hazemi ME, Chikuni T, Onizuka K, Sugimoto N, Nagatsugi F. Alkylating probes for the G-quadruplex structure and evaluation of the properties of the alkylated G-quadruplex DNA. Organic & Biomolecular Chemistry. PMID 29412214 DOI: 10.1039/C7Ob03179C |
0.368 |
|
| 2018 |
Teng Y, Pramanik S, Tateishi-Karimata H, Ohyama T, Sugimoto N. Drastic stability change of X-X mismatch in d(CXG) trinucleotide repeat disorders under molecular crowding condition. Biochemical and Biophysical Research Communications. PMID 29339157 DOI: 10.1016/J.Bbrc.2018.01.083 |
0.337 |
|
| 2018 |
Tateishi-Karimata H, Kawauchi K, Sugimoto N. Destabilization of DNA G-Quadruplexes by Chemical Environment Changes during Tumor Progression Facilitates Transcription Journal of the American Chemical Society. 140: 642-651. PMID 29286249 DOI: 10.1021/Jacs.7B09449 |
0.34 |
|
| 2018 |
Nagano Y, Endoh T, Ogasawara S, Sugimoto N, Tamiaki H. Synthetic Chlorophyll -A Derivatives Stabilize DNA G-Quadruplex Structures Biophysical Journal. 114. DOI: 10.1016/J.Bpj.2017.11.3272 |
0.395 |
|
| 2017 |
Takahashi S, Sugimoto N. Quantitative Analysis of Nucleic Acid Stability with Ligands Under High Pressure to Design Novel Drugs Targeting G-Quadruplexes. Current Protocols in Nucleic Acid Chemistry. 70: 17.9.1-17.9.17. PMID 28921497 DOI: 10.1002/Cpnc.39 |
0.413 |
|
| 2017 |
Takahashi S, Brazier JA, Sugimoto N. Topological impact of noncanonical DNA structures on Klenow fragment of DNA polymerase Proceedings of the National Academy of Sciences of the United States of America. 114: 9605-9610. PMID 28827350 DOI: 10.1073/Pnas.1704258114 |
0.38 |
|
| 2017 |
Zhou J, Amrane S, Rosu F, Salgado GF, Bian Y, Tateishi-Karimata H, Largy E, Korkut DN, Bourdoncle A, Miyoshi D, Zhang J, Ju H, Wang W, Sugimoto N, Gabelica V, et al. Unexpected Position-dependent Effects of Ribose G-quartets in G-quadruplexes. Journal of the American Chemical Society. PMID 28523907 DOI: 10.1021/Jacs.7B00648 |
0.354 |
|
| 2017 |
Endoh T, Sugimoto N. Conformational Dynamics of mRNA in Gene Expression as New Pharmaceutical Target. Chemical Record. 17: 817-832. PMID 28513996 DOI: 10.1002/Tcr.201700016 |
0.3 |
|
| 2017 |
Tateishi-Karimata H, Ohyama T, Muraoka T, Podbevsek P, Wawro AM, Tanaka S, Nakano SI, Kinbara K, Plavec J, Sugimoto N. Newly characterized interaction stabilizes DNA structure: oligoethylene glycols stabilize G-quadruplexes CH-π interactions. Nucleic Acids Research. PMID 28453855 DOI: 10.1093/Nar/Gkx299 |
0.394 |
|
| 2017 |
Takahashi S, Sugimoto N. Volumetric contributions of loop regions of G-quadruplex DNA to the formation of the tertiary structure. Biophysical Chemistry. 231: 146-154. PMID 28188007 DOI: 10.1016/J.Bpc.2017.02.001 |
0.357 |
|
| 2017 |
Pica A, Krauss IR, Parente V, Tateishi-Karimata H, Nagatoishi S, Tsumoto K, Sugimoto N, Sica F. Through-bond effects in the ternary complexes of thrombin sandwiched by two DNA aptamers Nucleic Acids Research. 45: 461-469. PMID 27899589 DOI: 10.1093/Nar/Gkw1113 |
0.346 |
|
| 2017 |
Fujii T, Podbevšek P, Plavec J, Sugimoto N. Effects of metal ions and cosolutes on G-quadruplex topology. Journal of Inorganic Biochemistry. 166: 190-198. PMID 27665315 DOI: 10.1016/J.Jinorgbio.2016.09.001 |
0.336 |
|
| 2017 |
Nakano S, Horita M, Kobayashi M, Sugimoto N. Catalytic Activities of Ribozymes and DNAzymes in Water and Mixed Aqueous Media Catalysts. 7: 355. DOI: 10.3390/Catal7120355 |
0.324 |
|
| 2016 |
Nakano SI, Sugimoto N. The structural stability and catalytic activity of DNA and RNA oligonucleotides in the presence of organic solvents. Biophysical Reviews. 8: 11-23. PMID 28510143 DOI: 10.1007/S12551-015-0188-0 |
0.361 |
|
| 2016 |
Ueda YM, Zouzumi YK, Maruyama A, Nakano SI, Sugimoto N, Miyoshi D. Effects of trimethylamine N-oxide and urea on DNA duplex and G-quadruplex. Science and Technology of Advanced Materials. 17: 753-759. PMID 27933115 DOI: 10.1080/14686996.2016.1243000 |
0.407 |
|
| 2016 |
Endoh T, Annoni C, Hnedzko D, Rozners E, Sugimoto N. Triplex-forming PNA modified with unnatural nucleobases: the role of protonation entropy in RNA binding. Physical Chemistry Chemical Physics : Pccp. PMID 27869270 DOI: 10.1039/C6Cp05013A |
0.34 |
|
| 2016 |
Nakano SI, Sugimoto N. Model studies of the effects of intracellular crowding on nucleic acid interactions. Molecular Biosystems. 13: 32-41. PMID 27819369 DOI: 10.1039/C6Mb00654J |
0.341 |
|
| 2016 |
Nakano SI, Tanino Y, Hirayama H, Sugimoto N. Thermal Stability of RNA Structures with Bulky Cations in Mixed Aqueous Solutions. Biophysical Journal. 111: 1350-1360. PMID 27705759 DOI: 10.1016/J.Bpj.2016.08.031 |
0.372 |
|
| 2016 |
Takahashi S, Bhowmik S, Sugimoto N. Volumetric analysis of formation of the complex of G-quadruplex DNA with hemin using high pressure. Journal of Inorganic Biochemistry. PMID 27624062 DOI: 10.1016/J.Jinorgbio.2016.08.011 |
0.35 |
|
| 2016 |
Rode AB, Endoh T, Sugimoto N. tRNA Shifts the G-quadruplex-Hairpin Conformational Equilibrium in RNA towards the Hairpin Conformer. Angewandte Chemie (International Ed. in English). PMID 27511794 DOI: 10.1002/Anie.201605431 |
0.367 |
|
| 2016 |
Fujita H, Kataoka Y, Tobita S, Kuwahara M, Sugimoto N. A Novel One-Tube-One-Step Real-Time Methodology for Rapid Transcriptomic Biomarker Detection: Signal Amplification by Ternary Initiation Complexes. Analytical Chemistry. PMID 27347743 DOI: 10.1021/Acs.Analchem.6B01192 |
0.393 |
|
| 2016 |
Tateishi-Karimata H, Muraoka T, Kinbara K, Sugimoto N. G-Quadruplexes with Tetra(ethylene glycol)-Modified Deoxythymidines are Resistant to Nucleases and Inhibit HIV-1 Reverse Transcriptase. Chembiochem : a European Journal of Chemical Biology. 17: 1399-402. PMID 27251574 DOI: 10.1002/Cbic.201600162 |
0.396 |
|
| 2016 |
Yamaguchi N, Zouzumi YK, Shimada N, Nakano S, Sugimoto N, Maruyama A, Miyoshi D. A reversible B-A transition of DNA duplexes induced by synthetic cationic copolymers. Chemical Communications (Cambridge, England). 52: 7446-9. PMID 27198180 DOI: 10.1039/C6Cc02237E |
0.326 |
|
| 2016 |
Annoni C, Endoh T, Hnedzko D, Rozners E, Sugimoto N. Triplex-forming peptide nucleic acid modified with 2-aminopyridine as a new tool for detection of A-to-I editing. Chemical Communications (Cambridge, England). PMID 27157071 DOI: 10.1039/C6Cc02164F |
0.352 |
|
| 2016 |
Nakano S, Oka H, Fujii M, Sugimoto N. Use of a Ureido-Substituted Deoxycytidine Module for DNA Assemblies. Nucleosides, Nucleotides & Nucleic Acids. 35: 370-8. PMID 27152551 DOI: 10.1080/15257770.2016.1174262 |
0.303 |
|
| 2016 |
Tateishi‐Karimata H, Sugimoto N. Expansion of the DNA Alphabet beyond Natural DNA Recognition. Chembiochem. 17: 1301-1303. PMID 27061868 DOI: 10.1002/Cbic.201600181 |
0.346 |
|
| 2016 |
Endoh T, Sugimoto N. Mechanical insights into ribosomal progression overcoming RNA G-quadruplex from periodical translation suppression in cells. Scientific Reports. 6: 22719. PMID 26948955 DOI: 10.1038/Srep22719 |
0.371 |
|
| 2016 |
Endoh T, Rode AB, Takahashi S, Kataoka Y, Kuwahara M, Sugimoto N. Real-Time Monitoring of G-Quadruplex Formation during Transcription. Analytical Chemistry. 88: 1984-9. PMID 26810457 DOI: 10.1021/Acs.Analchem.5B04396 |
0.377 |
|
| 2016 |
Endoh T, Hnedzko D, Rozners E, Sugimoto N. Nucleobase-Modified PNA Suppresses Translation by Forming a Triple Helix with a Hairpin Structure in mRNA In Vitro and in Cells. Angewandte Chemie (International Ed. in English). 55: 899-903. PMID 26473504 DOI: 10.1002/Anie.201505938 |
0.362 |
|
| 2016 |
Nakano M, Tateishi-Karimata H, Tanaka S, Tama F, Miyashita O, Nakano Si, Sugimoto N. Local thermodynamics of the water molecules around single- and double-stranded DNA studied by grid inhomogeneous solvation theory Chemical Physics Letters. 660: 250-255. DOI: 10.1016/J.Cplett.2016.08.032 |
0.3 |
|
| 2016 |
Rode AB, Endoh T, Sugimoto N. Inside Back Cover: tRNA Shifts the G‐quadruplex–Hairpin Conformational Equilibrium in RNA towards the Hairpin Conformer (Angew. Chem. Int. Ed. 46/2016) Angewandte Chemie. 55: 14469-14469. DOI: 10.1002/Anie.201608907 |
0.319 |
|
| 2016 |
Rode AB, Endoh T, Sugimoto N. Innenrücktitelbild: tRNA Shifts the G‐quadruplex–Hairpin Conformational Equilibrium in RNA towards the Hairpin Conformer (Angew. Chem. 46/2016) Angewandte Chemie. 128: 14685-14685. DOI: 10.1002/Ange.201608907 |
0.323 |
|
| 2015 |
Zhou J, Tateishi-Karimata H, Mergny JL, Cheng M, Feng Z, Miyoshi D, Sugimoto N, Li C. Reevaluation of the stability of G-quadruplex structures under crowding conditions. Biochimie. PMID 26708323 DOI: 10.1016/J.Biochi.2015.12.012 |
0.361 |
|
| 2015 |
Zhao A, Zhao C, Tateishi-Karimata H, Ren J, Sugimoto N, Qu X. Incorporation of O(6)-methylguanine restricts the conformational conversion of the human telomere G-quadruplex under molecular crowding conditions. Chemical Communications (Cambridge, England). PMID 26673900 DOI: 10.1039/C5Cc09728B |
0.324 |
|
| 2015 |
Nakano M, Tateishi-Karimata H, Tanaka S, Tama F, Miyashita O, Nakano SI, Sugimoto N. Thermodynamic properties of water molecules in the presence of cosolute depend on DNA structure: a study using grid inhomogeneous solvation theory. Nucleic Acids Research. PMID 26538600 DOI: 10.1093/Nar/Gkv1133 |
0.381 |
|
| 2015 |
Takahashi S, Sugimoto N. Pressure-dependent formation of i-motif and G-quadruplex DNA structures. Physical Chemistry Chemical Physics : Pccp. PMID 26387909 DOI: 10.1039/C5Cp04727G |
0.37 |
|
| 2015 |
Nakano S, Kitagawa Y, Miyoshi D, Sugimoto N. Effects of background anionic compounds on the activity of the hammerhead ribozyme in Mg(2+)-unsaturated solutions. Journal of Biological Inorganic Chemistry : Jbic : a Publication of the Society of Biological Inorganic Chemistry. 20: 1049-58. PMID 26220274 DOI: 10.1007/S00775-015-1286-Y |
0.344 |
|
| 2015 |
Nakano SI, Kitagawa Y, Yamashita H, Miyoshi D, Sugimoto N. Effects of Cosolvents on the Folding and Catalytic Activities of the Hammerhead Ribozyme. Chembiochem : a European Journal of Chemical Biology. PMID 26149371 DOI: 10.1002/Cbic.201500139 |
0.309 |
|
| 2015 |
Endoh T, Sugimoto N. Rational Design and Tuning of Functional RNA Switch to Control an Allosteric Intermolecular Interaction. Analytical Chemistry. 87: 7628-35. PMID 26122192 DOI: 10.1021/Acs.Analchem.5B00765 |
0.342 |
|
| 2015 |
Fujii T, Sugimoto N. Loop nucleotides impact the stability of intrastrand i-motif structures at neutral pH. Physical Chemistry Chemical Physics : Pccp. 17: 16719-22. PMID 26058487 DOI: 10.1039/C5Cp02794B |
0.313 |
|
| 2015 |
Tateishi-Karimata H, Pramanik S, Sugimoto N. DNA sensor's selectivity enhancement and protection from contaminating nucleases due to a hydrated ionic liquid. The Analyst. 140: 4393-8. PMID 25919083 DOI: 10.1039/C5An00545K |
0.371 |
|
| 2015 |
Yaku H, Murashima T, Miyoshi D, Sugimoto N. A mRNA-Responsive G-Quadruplex-Based Drug Release System. Sensors (Basel, Switzerland). 15: 9388-403. PMID 25905703 DOI: 10.3390/S150409388 |
0.352 |
|
| 2015 |
Tateishi-Karimata H, Nakano M, Pramanik S, Tanaka S, Sugimoto N. i-Motifs are more stable than G-quadruplexes in a hydrated ionic liquid. Chemical Communications (Cambridge, England). 51: 6909-12. PMID 25738708 DOI: 10.1039/C5Cc00666J |
0.326 |
|
| 2015 |
Usui K, Okada A, Kobayashi K, Sugimoto N. Control of guanine-rich DNA secondary structures depending on the protease activity using a designed PNA peptide. Organic & Biomolecular Chemistry. 13: 2022-5. PMID 25519192 DOI: 10.1039/C4Ob02535K |
0.342 |
|
| 2015 |
Rode AB, Endoh T, Sugimoto N. Tuning riboswitch-mediated gene regulation by rational control of aptamer ligand binding properties. Angewandte Chemie (International Ed. in English). 54: 905-9. PMID 25470002 DOI: 10.1002/Anie.201407385 |
0.302 |
|
| 2015 |
Maruši? M, Tateishi-Karimata H, Sugimoto N, Plavec J. Structural foundation for DNA behavior in hydrated ionic liquid: An NMR study. Biochimie. 108: 169-77. PMID 25433208 DOI: 10.1016/J.Biochi.2014.11.015 |
0.342 |
|
| 2015 |
Takahashi S, Sugimoto N. Effect of Molecular Environment and High Pressure on the Thermodynamic Stability of Nucleic Acid Structures The Review of High Pressure Science and Technology. 25: 116-125. DOI: 10.4131/Jshpreview.25.116 |
0.311 |
|
| 2015 |
Sugimoto N. Regulation of Transcription and Translation by Quadruplex Structure of Nucleic Acids and Its Stabilizers Bulletin of Japan Society of Coordination Chemistry. 65: 23-29. DOI: 10.4019/Bjscc.65.23 |
0.312 |
|
| 2015 |
Ueda Y, Konno T, Ishihara K, Sugimoto N, Miyoshi D. DNA structures under molecular crowding conditions with a phosphorylcholine derivative (MPC) Transactions-Materials Research Society of Japan. 40: 99-102. DOI: 10.14723/Tmrsj.40.99 |
0.355 |
|
| 2014 |
Xu B, Zhao C, Chen Y, Tateishi-Karimata H, Ren J, Sugimoto N, Qu X. Methyl substitution regulates the enantioselectivity of supramolecular complex binding to human telomeric G-quadruplex DNA. Chemistry (Weinheim An Der Bergstrasse, Germany). 20: 16467-72. PMID 25346393 DOI: 10.1002/Chem.201404854 |
0.356 |
|
| 2014 |
Pramanik S, Tateishi-Karimata H, Sugimoto N. Organelle-mimicking liposome dissociates G-quadruplexes and facilitates transcription. Nucleic Acids Research. 42: 12949-59. PMID 25336617 DOI: 10.1093/Nar/Gku998 |
0.324 |
|
| 2014 |
Nakano S, Kitagawa Y, Miyoshi D, Sugimoto N. Hammerhead ribozyme activity and oligonucleotide duplex stability in mixed solutions of water and organic compounds. Febs Open Bio. 4: 643-50. PMID 25161873 DOI: 10.1016/J.Fob.2014.06.009 |
0.347 |
|
| 2014 |
Nakano S, Sugimoto N. Roles of the amino group of purine bases in the thermodynamic stability of DNA base pairing. Molecules (Basel, Switzerland). 19: 11613-27. PMID 25100254 DOI: 10.3390/Molecules190811613 |
0.409 |
|
| 2014 |
Tateishi-Karimata H, Pramanik S, Nakano S, Miyoshi D, Sugimoto N. Dangling ends perturb the stability of RNA duplexes responsive to surrounding conditions. Chemmedchem. 9: 2150-5. PMID 25070089 DOI: 10.1002/Cmdc.201402167 |
0.372 |
|
| 2014 |
Nakano M, Tateishi-Karimata H, Tanaka S, Sugimoto N. Affinity of molecular ions for DNA structures is determined by solvent-accessible surface area. The Journal of Physical Chemistry. B. 118: 9583-94. PMID 25046432 DOI: 10.1021/Jp505107G |
0.373 |
|
| 2014 |
Miyoshi D, Ueda YM, Shimada N, Nakano S, Sugimoto N, Maruyama A. Drastic stabilization of parallel DNA hybridizations by a polylysine comb-type copolymer with hydrophilic graft chain. Chemmedchem. 9: 2156-63. PMID 25045164 DOI: 10.1002/Cmdc.201402157 |
0.416 |
|
| 2014 |
Tateishi-Karimata H, Sugimoto N. Structure, stability and behaviour of nucleic acids in ionic liquids. Nucleic Acids Research. 42: 8831-44. PMID 25013178 DOI: 10.1093/Nar/Gku499 |
0.352 |
|
| 2014 |
Endoh T, Sugimoto N. Aptamer-based universal fluorometric sensors based on allosteric modulation of RNA-peptide interactions. Chemmedchem. 9: 2045-8. PMID 24990122 DOI: 10.1002/Cmdc.201402151 |
0.348 |
|
| 2014 |
Tateishi-Karimata H, Isono N, Sugimoto N. New insights into transcription fidelity: thermal stability of non-canonical structures in template DNA regulates transcriptional arrest, pause, and slippage. Plos One. 9: e90580. PMID 24594642 DOI: 10.1371/Journal.Pone.0090580 |
0.378 |
|
| 2014 |
Tateishi-Karimata H, Nakano M, Sugimoto N. Comparable stability of Hoogsteen and Watson-Crick base pairs in ionic liquid choline dihydrogen phosphate. Scientific Reports. 4: 3593. PMID 24399194 DOI: 10.1038/Srep03593 |
0.377 |
|
| 2014 |
Sugimoto N. Noncanonical structures and their thermodynamics of DNA and RNA under molecular crowding: beyond the Watson-Crick double helix. International Review of Cell and Molecular Biology. 307: 205-73. PMID 24380597 DOI: 10.1016/B978-0-12-800046-5.00008-4 |
0.399 |
|
| 2014 |
Nakano S, Miyoshi D, Sugimoto N. Effects of molecular crowding on the structures, interactions, and functions of nucleic acids. Chemical Reviews. 114: 2733-58. PMID 24364729 DOI: 10.1021/Cr400113M |
0.301 |
|
| 2014 |
Yaku H, Murashima T, Miyoshi D, Sugimoto N. In vitro assays predictive of telomerase inhibitory effect of G-quadruplex ligands in cell nuclei. The Journal of Physical Chemistry. B. 118: 2605-14. PMID 24328194 DOI: 10.1021/Jp410669T |
0.33 |
|
| 2014 |
Tateishi-Karimta H, Sugimoto N. Control of stability and structure of nucleic acids using cosolutes. Methods (San Diego, Calif.). 67: 151-8. PMID 24270066 DOI: 10.1016/J.Ymeth.2013.11.002 |
0.324 |
|
| 2014 |
Nakano M, Tateishi-Karimata H, Tanaka S, Sugimoto N. Choline ion interactions with DNA atoms explain unique stabilization of A-T base pairs in DNA duplexes: a microscopic view. The Journal of Physical Chemistry. B. 118: 379-89. PMID 24171395 DOI: 10.1021/Jp406647B |
0.333 |
|
| 2014 |
Nakano S, Yoshida M, Yamaguchi D, Sugimoto N. Preparation of hydrogels for the study of the effects of spatial confinement on DNA Transactions of the Materials Research Society of Japan. 39: 435-438. DOI: 10.14723/Tmrsj.39.435 |
0.302 |
|
| 2014 |
Miyoshi D, Ueda Y, Shimada N, Nakano S, Sugimoto N, Maruyama A. Back Cover: Drastic Stabilization of Parallel DNA Hybridizations by a Polylysine Comb-Type Copolymer with Hydrophilic Graft Chain (ChemMedChem 9/2014) Chemmedchem. 9: 2208-2208. DOI: 10.1002/Cmdc.201490036 |
0.306 |
|
| 2014 |
Tateishi‐Karimata H, Pramanik S, Nakano S, Miyoshi D, Sugimoto N. Inside Back Cover: Dangling Ends Perturb the Stability of RNA Duplexes Responsive to Surrounding Conditions (ChemMedChem 9/2014) Chemmedchem. 9: 2207-2207. DOI: 10.1002/Cmdc.201490035 |
0.326 |
|
| 2013 |
Fujita H, Imaizumi Y, Kasahara Y, Kitadume S, Ozaki H, Kuwahara M, Sugimoto N. Structural and affinity analyses of g-quadruplex DNA aptamers for camptothecin derivatives. Pharmaceuticals (Basel, Switzerland). 6: 1082-93. PMID 24276420 DOI: 10.3390/Ph6091082 |
0.353 |
|
| 2013 |
Endoh T, Sugimoto N. Unusual -1 ribosomal frameshift caused by stable RNA G-quadruplex in open reading frame. Analytical Chemistry. 85: 11435-9. PMID 24191683 DOI: 10.1021/Ac402497X |
0.379 |
|
| 2013 |
Takahashi S, Sugimoto N. Effect of pressure on thermal stability of g-quadruplex DNA and double-stranded DNA structures. Molecules (Basel, Switzerland). 18: 13297-319. PMID 24172240 DOI: 10.3390/Molecules181113297 |
0.397 |
|
| 2013 |
Takahashi S, Sugimoto N. Effect of pressure on the stability of G-quadruplex DNA: thermodynamics under crowding conditions. Angewandte Chemie (International Ed. in English). 52: 13774-8. PMID 24167065 DOI: 10.1002/Anie.201307714 |
0.348 |
|
| 2013 |
Pica A, Russo Krauss I, Merlino A, Nagatoishi S, Sugimoto N, Sica F. Dissecting the contribution of thrombin exosite I in the recognition of thrombin binding aptamer. The Febs Journal. 280: 6581-8. PMID 24128303 DOI: 10.1111/Febs.12561 |
0.354 |
|
| 2013 |
Yaku H, Murashima T, Miyoshi D, Sugimoto N. A highly sensitive telomerase activity assay that eliminates false-negative results caused by PCR inhibitors. Molecules (Basel, Switzerland). 18: 11751-67. PMID 24071983 DOI: 10.3390/Molecules181011751 |
0.315 |
|
| 2013 |
Marchand A, Ferreira R, Tateishi-Karimata H, Miyoshi D, Sugimoto N, Gabelica V. Sequence and solvent effects on telomeric DNA bimolecular G-quadruplex folding kinetics. The Journal of Physical Chemistry. B. 117: 12391-401. PMID 23978125 DOI: 10.1021/Jp406857S |
0.39 |
|
| 2013 |
Gabelica V, Maeda R, Fujimoto T, Yaku H, Murashima T, Sugimoto N, Miyoshi D. Multiple and cooperative binding of fluorescence light-up probe thioflavin T with human telomere DNA G-quadruplex. Biochemistry. 52: 5620-8. PMID 23909872 DOI: 10.1021/Bi4006072 |
0.344 |
|
| 2013 |
Nakano S, Uotani Y, Sato Y, Oka H, Fujii M, Sugimoto N. Conformational changes of the phenyl and naphthyl isocyanate-DNA adducts during DNA replication and by minor groove binding molecules. Nucleic Acids Research. 41: 8581-90. PMID 23873956 DOI: 10.1093/Nar/Gkt608 |
0.365 |
|
| 2013 |
Tateishi-Karimata H, Nakano S, Sugimoto N. Quantitative analyses of nucleic Acid stability under the molecular crowding condition induced by cosolutes. Current Protocols in Nucleic Acid Chemistry / Edited by Serge L. Beaucage ... [Et Al.]. Unit7.19. PMID 23775810 DOI: 10.1002/0471142700.Nc0719S53 |
0.363 |
|
| 2013 |
Imaizumi Y, Kasahara Y, Fujita H, Kitadume S, Ozaki H, Endoh T, Kuwahara M, Sugimoto N. Efficacy of base-modification on target binding of small molecule DNA aptamers. Journal of the American Chemical Society. 135: 9412-9. PMID 23734784 DOI: 10.1021/Ja4012222 |
0.357 |
|
| 2013 |
Endoh T, Kawasaki Y, Sugimoto N. Stability of RNA quadruplex in open reading frame determines proteolysis of human estrogen receptor α. Nucleic Acids Research. 41: 6222-31. PMID 23620292 DOI: 10.1093/Nar/Gkt286 |
0.344 |
|
| 2013 |
Endoh T, Kawasaki Y, Sugimoto N. Suppression of gene expression by G-quadruplexes in open reading frames depends on G-quadruplex stability. Angewandte Chemie (International Ed. in English). 52: 5522-6. PMID 23589400 DOI: 10.1002/Anie.201300058 |
0.301 |
|
| 2013 |
Yaku H, Murashima T, Tateishi-Karimata H, Nakano S, Miyoshi D, Sugimoto N. Study on effects of molecular crowding on G-quadruplex-ligand binding and ligand-mediated telomerase inhibition. Methods (San Diego, Calif.). 64: 19-27. PMID 23562626 DOI: 10.1016/J.Ymeth.2013.03.028 |
0.337 |
|
| 2013 |
Endoh T, Sugimoto N. Selection of RNAs for constructing "Lighting-UP" biomolecular switches in response to specific small molecules. Plos One. 8: e60222. PMID 23555931 DOI: 10.1371/Journal.Pone.0060222 |
0.327 |
|
| 2013 |
Fujimoto T, Nakano S, Sugimoto N, Miyoshi D. Thermodynamics-hydration relationships within loops that affect G-quadruplexes under molecular crowding conditions. The Journal of Physical Chemistry. B. 117: 963-72. PMID 23153339 DOI: 10.1021/Jp308402V |
0.385 |
|
| 2013 |
Miyoshi D, Fujimoto T, Sugimoto N. Molecular crowding and hydration regulating of G-quadruplex formation. Topics in Current Chemistry. 330: 87-110. PMID 22752579 DOI: 10.1007/128_2012_335 |
0.356 |
|
| 2013 |
Nakano M, Tateishi-Karimata H, Sugimoto N. 3P119 Analysis for the effect of choline ions on the stability of DNA base pairs using molecular dynamics simulation(05A. Nucleic acid: Structure & Property,Poster) Seibutsu Butsuri. 53. DOI: 10.2142/Biophys.53.S231_4 |
0.339 |
|
| 2013 |
Takahashi S, Sugimoto N. Inside Back Cover: Effect of Pressure on the Stability of G‐Quadruplex DNA: Thermodynamics under Crowding Conditions (Angew. Chem. Int. Ed. 51/2013) Angewandte Chemie. 52: 13823-13823. DOI: 10.1002/Anie.201309404 |
0.323 |
|
| 2013 |
Takahashi S, Sugimoto N. Innenrücktitelbild: Effect of Pressure on the Stability of G‐Quadruplex DNA: Thermodynamics under Crowding Conditions (Angew. Chem. 51/2013) Angewandte Chemie. 125: 14067-14067. DOI: 10.1002/Ange.201309404 |
0.325 |
|
| 2012 |
Nakano S, Oka H, Yamaguchi D, Fujii M, Sugimoto N. Base-pairing selectivity of a ureido-linked phenyl-2'-deoxycytidine derivative. Organic & Biomolecular Chemistry. 10: 9664-70. PMID 23147647 DOI: 10.1039/C2Ob26897C |
0.368 |
|
| 2012 |
Yu H, Gu X, Nakano S, Miyoshi D, Sugimoto N. Beads-on-a-string structure of long telomeric DNAs under molecular crowding conditions. Journal of the American Chemical Society. 134: 20060-9. PMID 22934853 DOI: 10.1021/Ja305384C |
0.39 |
|
| 2012 |
Saxena S, Nagatoishi S, Miyoshi D, Sugimoto N. Structural and Functional Characterization of RecG Helicase under Dilute and Molecular Crowding Conditions. Journal of Nucleic Acids. 2012: 392039. PMID 22919464 DOI: 10.1155/2012/392039 |
0.328 |
|
| 2012 |
Nagatoishi S, Sugimoto N. Interaction of water with the G-quadruplex loop contributes to the binding energy of G-quadruplex to protein. Molecular Biosystems. 8: 2766-70. PMID 22851057 DOI: 10.1039/C2Mb25234A |
0.33 |
|
| 2012 |
Nakano S, Yamaguchi D, Tateishi-Karimata H, Miyoshi D, Sugimoto N. Hydration changes upon DNA folding studied by osmotic stress experiments. Biophysical Journal. 102: 2808-17. PMID 22735531 DOI: 10.1016/J.Bpj.2012.05.019 |
0.406 |
|
| 2012 |
Nakano S, Hirayama H, Miyoshi D, Sugimoto N. Dimerization of nucleic acid hairpins in the conditions caused by neutral cosolutes. The Journal of Physical Chemistry. B. 116: 7406-15. PMID 22703387 DOI: 10.1021/Jp302170F |
0.384 |
|
| 2012 |
Yaku H, Fujimoto T, Murashima T, Miyoshi D, Sugimoto N. Phthalocyanines: a new class of G-quadruplex-ligands with many potential applications. Chemical Communications (Cambridge, England). 48: 6203-16. PMID 22590705 DOI: 10.1039/C2Cc31037F |
0.349 |
|
| 2012 |
Nagatoishi S, Ono R, Sugimoto N. The yields of transcripts for a RNA polymerase regulated by hairpin structures in nascent RNAs. Chemical Communications (Cambridge, England). 48: 5121-3. PMID 22517075 DOI: 10.1039/C2Cc31657A |
0.317 |
|
| 2012 |
Pramanik S, Nagatoishi S, Sugimoto N. DNA tetraplex structure formation from human telomeric repeat motif (TTAGGG):(CCCTAA) in nanocavity water pools of reverse micelles. Chemical Communications (Cambridge, England). 48: 4815-7. PMID 22456442 DOI: 10.1039/C2Cc30622K |
0.356 |
|
| 2011 |
Pramanik S, Nagatoishi S, Saxena S, Bhattacharyya J, Sugimoto N. Conformational flexibility influences degree of hydration of nucleic acid hybrids. The Journal of Physical Chemistry. B. 115: 13862-72. PMID 21992117 DOI: 10.1021/Jp207856P |
0.388 |
|
| 2011 |
Fujimoto T, Nakano S, Miyoshi D, Sugimoto N. The effects of molecular crowding on the structure and stability of g-quadruplexes with an abasic site. Journal of Nucleic Acids. 2011: 857149. PMID 21949901 DOI: 10.4061/2011/857149 |
0.372 |
|
| 2011 |
Kawakami J, Yamaguchi Y, Sugimoto N. Triplet Analysis That Identifies Unpaired Regions of Functional RNAs. Journal of Nucleic Acids. 2011: 471843. PMID 21941630 DOI: 10.4061/2011/471843 |
0.356 |
|
| 2011 |
Nakano S, Fujii M, Sugimoto N. Use of nucleic Acid analogs for the study of nucleic Acid interactions. Journal of Nucleic Acids. 2011: 967098. PMID 21822475 DOI: 10.4061/2011/967098 |
0.359 |
|
| 2011 |
Bhattacharyya J, Maiti S, Muhuri S, Nakano S, Miyoshi D, Sugimoto N. Effect of locked nucleic acid modifications on the thermal stability of noncanonical DNA structure. Biochemistry. 50: 7414-25. PMID 21774551 DOI: 10.1021/Bi200477G |
0.373 |
|
| 2011 |
Nakano S, Kanzaki T, Nakano M, Miyoshi D, Sugimoto N. Measurements of the binding of a large protein using a substrate density-controlled DNA chip. Analytical Chemistry. 83: 6368-72. PMID 21774522 DOI: 10.1021/Ac201312D |
0.338 |
|
| 2011 |
Miyoshi D, Sugimoto N. G-quartet, G-quadruplex, and G-wire regulated by chemical stimuli. Methods in Molecular Biology (Clifton, N.J.). 749: 93-104. PMID 21674367 DOI: 10.1007/978-1-61779-142-0_7 |
0.314 |
|
| 2011 |
Nagatoishi S, Isono N, Tsumoto K, Sugimoto N. Hydration is required in DNA G-quadruplex-protein binding. Chembiochem : a European Journal of Chemical Biology. 12: 1822-6. PMID 21671334 DOI: 10.1002/Cbic.201100264 |
0.386 |
|
| 2011 |
Nagatoishi S, Isono N, Tsumoto K, Sugimoto N. Loop residues of thrombin-binding DNA aptamer impact G-quadruplex stability and thrombin binding. Biochimie. 93: 1231-8. PMID 21511000 DOI: 10.1016/J.Biochi.2011.03.013 |
0.376 |
|
| 2011 |
Pramanik S, Nakamura K, Usui K, Nakano S, Saxena S, Matsui J, Miyoshi D, Sugimoto N. Thermodynamic stability of Hoogsteen and Watson-Crick base pairs in the presence of histone H3-mimicking peptide. Chemical Communications (Cambridge, England). 47: 2790-2. PMID 21308127 DOI: 10.1039/C0Cc05776B |
0.331 |
|
| 2011 |
Nagatoishi S, Miyoshi D, Sugimoto N. Effects of Protein Binding on DNA G-Quadruplex Structures International Review of Biophysical Chemistry. 2: 129-134. DOI: 10.15866/Irebic.V2I4.1524 |
0.367 |
|
| 2011 |
Kobayashi K, Tateishi-Karimata H, Tsutsui K, Wada Y, Sugimoto N. DNA Morphologic Changes Induced by Spermine on a Gold Surface under DNA Crowding Conditions Chemistry Letters. 40: 855-857. DOI: 10.1246/Cl.2011.855 |
0.334 |
|
| 2010 |
Dutta K, Fujimoto T, Inoue M, Miyoshi D, Sugimoto N. Development of new functional nanostructures consisting of both DNA duplex and quadruplex. Chemical Communications (Cambridge, England). 46: 7772-4. PMID 20820501 DOI: 10.1039/C0Cc00710B |
0.371 |
|
| 2010 |
Kuwahara M, Sugimoto N. Molecular evolution of functional nucleic acids with chemical modifications. Molecules (Basel, Switzerland). 15: 5423-44. PMID 20714306 DOI: 10.3390/Molecules15085423 |
0.325 |
|
| 2010 |
Nakano S, Oka H, Uotani Y, Uenishi K, Fujii M, Sugimoto N. Stacking interaction in the middle and at the end of a DNA helix studied with non-natural nucleotides. Molecular Biosystems. 6: 2023-9. PMID 20694257 DOI: 10.1039/C0Mb00002G |
0.384 |
|
| 2010 |
Saxena S, Miyoshi D, Sugimoto N. Sole and stable RNA duplexes of G-rich sequences located in the 5'-untranslated region of protooncogenes. Biochemistry. 49: 7190-201. PMID 20672842 DOI: 10.1021/Bi101093A |
0.42 |
|
| 2010 |
Yaku H, Murashima T, Miyoshi D, Sugimoto N. Anionic phthalocyanines targeting G-quadruplexes and inhibiting telomerase activity in the presence of excessive DNA duplexes. Chemical Communications (Cambridge, England). 46: 5740-2. PMID 20596577 DOI: 10.1039/C0Cc00956C |
0.38 |
|
| 2010 |
Rajendran A, Nakano S, Sugimoto N. Molecular crowding of the cosolutes induces an intramolecular i-motif structure of triplet repeat DNA oligomers at neutral pH. Chemical Communications (Cambridge, England). 46: 1299-301. PMID 20449283 DOI: 10.1039/B922050J |
0.373 |
|
| 2010 |
Zhang DH, Fujimoto T, Saxena S, Yu HQ, Miyoshi D, Sugimoto N. Monomorphic RNA G-quadruplex and polymorphic DNA G-quadruplex structures responding to cellular environmental factors. Biochemistry. 49: 4554-63. PMID 20420470 DOI: 10.1021/Bi1002822 |
0.422 |
|
| 2010 |
Sasaki Y, Miyoshi D, Sugimoto N. Utilization of salmon milt DNA against UV damage. Applied Biochemistry and Biotechnology. 160: 2458-66. PMID 19590985 DOI: 10.1007/S12010-009-8697-6 |
0.326 |
|
| 2009 |
Nakano S, Karimata HT, Kitagawa Y, Sugimoto N. Facilitation of RNA enzyme activity in the molecular crowding media of cosolutes. Journal of the American Chemical Society. 131: 16881-8. PMID 19874030 DOI: 10.1021/Ja9066628 |
0.35 |
|
| 2009 |
Nakano S, Oka H, Uotani Y, Uenishi K, Fujii M, Sugimoto N. Dynamics and energetics of the base flipping conformation studied with base pair-mimic nucleosides. Biochemistry. 48: 11304-11. PMID 19839646 DOI: 10.1021/Bi901496Q |
0.421 |
|
| 2009 |
Muhuri S, Mimura K, Miyoshi D, Sugimoto N. Stabilization of three-way junctions of DNA under molecular crowding conditions. Journal of the American Chemical Society. 131: 9268-80. PMID 19566098 DOI: 10.1021/Ja900744E |
0.363 |
|
| 2009 |
Wu L, Koumoto K, Sugimoto N. Reversible stability switching of a hairpin DNA via a photo-responsive linker unit. Chemical Communications (Cambridge, England). 1915-7. PMID 19319444 DOI: 10.1039/B819643E |
0.351 |
|
| 2009 |
Miyoshi D, Nakamura K, Tateishi-Karimata H, Ohmichi T, Sugimoto N. Hydration of Watson-Crick base pairs and dehydration of Hoogsteen base pairs inducing structural polymorphism under molecular crowding conditions. Journal of the American Chemical Society. 131: 3522-31. PMID 19236045 DOI: 10.1021/Ja805972A |
0.347 |
|
| 2009 |
Sugimoto N. Designable DNA functions toward new nanobiotechnology Bulletin of the Chemical Society of Japan. 82: 1-10. DOI: 10.1246/Bcsj.82.1 |
0.379 |
|
| 2008 |
Yaku H, Yukimasa T, Nakano S, Sugimoto N, Oka H. Design of allele-specific primers and detection of the human ABO genotyping to avoid the pseudopositive problem. Electrophoresis. 29: 4130-40. PMID 18991264 DOI: 10.1002/Elps.200800097 |
0.323 |
|
| 2008 |
Yu HQ, Zhang DH, Gu XB, Miyoshi D, Sugimoto N. Regulation of telomerase activity by the thermodynamic stability of a DNA x RNA hybrid. Angewandte Chemie (International Ed. in English). 47: 9034-8. PMID 18850626 DOI: 10.1002/Anie.200803577 |
0.365 |
|
| 2008 |
Nakano S, Wu L, Oka H, Karimata HT, Kirihata T, Sato Y, Fujii S, Sakai H, Kuwahara M, Kuwahara M, Sawai H, Sugimoto N. Conformation and the sodium ion condensation on DNA and RNA structures in the presence of a neutral cosolute as a mimic of the intracellular media. Molecular Biosystems. 4: 579-88. PMID 18493656 DOI: 10.1039/B718806D |
0.406 |
|
| 2008 |
Nakano S, Kirihata T, Sugimoto N. Capture of cationic ligands bound diffusely to base pairs during DNA refolding. Chemical Communications (Cambridge, England). 700-2. PMID 18478695 DOI: 10.1039/B715647B |
0.318 |
|
| 2008 |
Murashima T, Sakiyama D, Miyoshi D, Kuriyama M, Yamada T, Miyazawa T, Sugimoto N. Cationic porphyrin induced a telomeric DNA to g-quadruplex form in water. Bioinorganic Chemistry and Applications. 294756. PMID 18350116 DOI: 10.1155/2008/294756 |
0.394 |
|
| 2008 |
Miyoshi D, Sugimoto N. Molecular crowding effects on structure and stability of DNA. Biochimie. 90: 1040-51. PMID 18331845 DOI: 10.1016/J.Biochi.2008.02.009 |
0.35 |
|
| 2008 |
Kawakami J, Okabe S, Tanabe Y, Sugimoto N. Recognition of a flipped base in a hairpinloop DNA by a small peptide. Nucleosides, Nucleotides & Nucleic Acids. 27: 292-308. PMID 18260012 DOI: 10.1080/15257770701845261 |
0.328 |
|
| 2008 |
Oka H, Nakano S, Uotani Y, Uenishi K, Fujii M, Sugimoto N. Functionalization of DNA by the base pair-mimic nucleosides. Nucleic Acids Symposium Series (2004). 151-2. PMID 18029631 DOI: 10.1093/NASS/NRM076 |
0.315 |
|
| 2008 |
Koumoto K, Ochiai H, Sugimoto N. Hydration Is an Important Factor to Regulate Thermodynamic Stability of a DNA Duplex under Molecular Crowding Conditions Chemistry Letters. 37: 864-865. DOI: 10.1246/Cl.2008.864 |
0.363 |
|
| 2008 |
Koumoto K, Ochiai H, Sugimoto N. Structural effect of synthetic zwitterionic cosolutes on the stability of DNA duplexes Tetrahedron. 64: 168-174. DOI: 10.1016/J.Tet.2007.10.060 |
0.357 |
|
| 2007 |
Miyoshi D, Karimata H, Sugimoto N. Hydration regulates the thermodynamic stability of DNA structures under molecular crowding conditions. Nucleosides, Nucleotides & Nucleic Acids. 26: 589-595. PMID 18066861 DOI: 10.1080/15257770701490282 |
0.4 |
|
| 2007 |
Gu X, Nakano S, Sugimoto N. Consecutive GC base pairs determine the energy barrier of DNA duplex formation under molecularly crowded conditions. Chemical Communications. 2750-2. PMID 17594042 DOI: 10.1039/B702865B |
0.363 |
|
| 2007 |
Sasaki Y, Miyoshi D, Sugimoto N. Regulation of DNA nucleases by molecular crowding Nucleic Acids Research. 35: 4086-4093. PMID 17567601 DOI: 10.1093/Nar/Gkm445 |
0.347 |
|
| 2007 |
Miyoshi D, Karimata H, Wang Z, Koumoto K, Sugimoto N. Artificial G-wire switch with 2,2'-bipyridine units responsive to divalent metal ions. Journal of the American Chemical Society. 129: 5919-5925. PMID 17439212 DOI: 10.1021/Ja068707U |
0.351 |
|
| 2007 |
Nakano S, Kirihata T, Fujii S, Sakai H, Kuwahara M, Sawai H, Sugimoto N. Influence of cationic molecules on the hairpin to duplex equilibria of self-complementary DNA and RNA oligonucleotides Nucleic Acids Research. 35: 486-494. PMID 17169988 DOI: 10.1093/Nar/Gkl1073 |
0.399 |
|
| 2007 |
Karimata H, Nakano S, Sugimoto N. Effects of Polyethylene Glycol on DNA Duplex Stability at Different NaCl Concentrations Bulletin of the Chemical Society of Japan. 80: 1987-1994. DOI: 10.1246/Bcsj.80.1987 |
0.361 |
|
| 2007 |
Murashima T, Hayata K, Saiki Y, Matsui J, Miyoshi D, Yamada T, Miyazawa T, Sugimoto N. Synthesis, structure and thermal stability of fully hydrophobic porphyrin–DNA conjugates Tetrahedron Letters. 48: 8514-8517. DOI: 10.1016/J.Tetlet.2007.09.147 |
0.376 |
|
| 2006 |
Yu H, Miyoshi D, Sugimoto N. Characterization of Structure and Stability of Long Telomeric DNA G-Quadruplexes Journal of the American Chemical Society. 128: 15461-15468. PMID 17132013 DOI: 10.1021/Ja064536H |
0.376 |
|
| 2006 |
Miyoshi D, Inoue M, Sugimoto N. DNA Logic Gates Based on Structural Polymorphism of Telomere DNA Molecules Responding to Chemical Input Signals Angewandte Chemie. 45: 7716-7719. PMID 17031891 DOI: 10.1002/Anie.200602404 |
0.341 |
|
| 2006 |
Sasaki Y, Miyoshi D, Sugimoto N. Effect of molecular crowding on DNA polymerase activity. Biotechnology Journal. 1: 440-446. PMID 16892271 DOI: 10.1002/Biot.200500032 |
0.356 |
|
| 2006 |
Kawakami J, Sugimoto N, Tokitoh H, Tanabe Y. A novel stable RNA pentaloop that interacts specifically with a motif peptide of lambda-N protein. Nucleosides, Nucleotides & Nucleic Acids. 25: 397-416. PMID 16838834 DOI: 10.1080/15257770600684027 |
0.329 |
|
| 2006 |
Miyoshi D, Karimata H, Sugimoto N. Hydration regulates thermodynamics of G-quadruplex formation under molecular crowding conditions. Journal of the American Chemical Society. 128: 7957-7963. PMID 16771510 DOI: 10.1021/Ja061267M |
0.381 |
|
| 2005 |
Nakano S, Uotani Y, Uenishi K, Fujii M, Sugimoto N. DNA base flipping by a base pair-mimic nucleoside Nucleic Acids Research. 33: 7111-7119. PMID 16361269 DOI: 10.1093/Nar/Gki1018 |
0.342 |
|
| 2005 |
Ohmichi T, Takashima A, Sugimoto N. A nano-circular single-stranded DNA as a novel tool for SNPs detection Nucleosides, Nucleotides & Nucleic Acids. 24: 359-366. PMID 16247952 DOI: 10.1081/Ncn-200059783 |
0.327 |
|
| 2005 |
Ohmichi T, Kawamoto Y, Wu P, Miyoshi D, Karimata H, Sugimoto N. DNA-based biosensor for monitoring pH in vitro and in living cells. Biochemistry. 44: 7125-30. PMID 15882051 DOI: 10.1021/Bi0476782 |
0.314 |
|
| 2005 |
Kawakami J, Tsujita K, Sugimoto N. Thermodynamic analysis of duplex formation of the heterochiral DNA with L-deoxyadenosine. Analytical Sciences. 21: 77-82. PMID 15732462 DOI: 10.2116/Analsci.21.77 |
0.349 |
|
| 2005 |
Nakano S, Uotani Y, Uenishi K, Fujii M, Sugimoto N. Site-selective RNA cleavage by DNA bearing a base pair-mimic nucleoside. Journal of the American Chemical Society. 127: 518-519. PMID 15643864 DOI: 10.1021/Ja045445S |
0.384 |
|
| 2004 |
Nakano S, Karimata H, Ohmichi T, Kawakami J, Sugimoto N. The effect of molecular crowding with nucleotide length and cosolute structure on DNA duplex stability Journal of the American Chemical Society. 126: 14330-14331. PMID 15521733 DOI: 10.1021/Ja0463029 |
0.383 |
|
| 2004 |
Nakano S, Kanzaki T, Sugimoto N. Influences of Ribonucleotide on a Duplex Conformation and Its Thermal Stability: Study with the Chimeric RNA−DNA Strands Journal of the American Chemical Society. 126: 1088-1095. PMID 14746477 DOI: 10.1021/Ja037314H |
0.406 |
|
| 2004 |
Miyoshi D, Matsumura S, Nakano S, Sugimoto N. Duplex dissociation of telomere DNAs induced by molecular crowding. Journal of the American Chemical Society. 126: 165-9. PMID 14709080 DOI: 10.1021/Ja036721Q |
0.381 |
|
| 2003 |
Miyoshi D, Nakao A, Sugimoto N. Effect of putrescine and PEG on a structural transition of DNA G-quadruplex. Nucleosides, Nucleotides & Nucleic Acids. 22: 1591-4. PMID 14565473 DOI: 10.1081/Ncn-120023041 |
0.362 |
|
| 2003 |
Li W, Miyoshi D, Nakano S, Sugimoto N. Structural competition involving G-quadruplex DNA and its complement. Biochemistry. 42: 11736-11744. PMID 14529284 DOI: 10.1021/Bi034168J |
0.374 |
|
| 2003 |
Kanzaki T, Nakano S, Sugimoto N. Role of 2'-OH on thermodynamic stability and structure of chimeric oligonucleotides. Nucleic Acids Research. Supplement (2001). 189-90. PMID 12903169 DOI: 10.1093/NASS/2.1.189 |
0.301 |
|
| 2003 |
Nakano S, Uotani Y, Nakashima S, Anno Y, Fujii M, Sugimoto N. Large stabilization of a DNA duplex by the deoxyadenosine derivatives tethering an aromatic hydrocarbon group. Journal of the American Chemical Society. 125: 8086-8087. PMID 12837062 DOI: 10.1021/Ja034465B |
0.346 |
|
| 2003 |
Miyoshi D, Matsumura S, Li W, Sugimoto N. Structural polymorphism of telomeric DNA regulated by pH and divalent cation. Nucleosides, Nucleotides & Nucleic Acids. 22: 203-221. PMID 12744606 DOI: 10.1081/Ncn-120019528 |
0.366 |
|
| 2003 |
Okumoto Y, Tanabe Y, Sugimoto N. Factors that Contribute to Efficient Catalytic Activity of a Small Ca2+-Dependent Deoxyribozyme in Relation to Its RNA Cleavage Function† Biochemistry. 42: 2158-2165. PMID 12590605 DOI: 10.1021/Bi020364Z |
0.34 |
|
| 2003 |
Miyoshi D, Nakao A, Sugimoto N. Structural transition from antiparallel to parallel G-quadruplex of d(G4T4G4) induced by Ca2+. Nucleic Acids Research. 31: 1156-63. PMID 12582234 DOI: 10.1093/Nar/Gkg211 |
0.33 |
|
| 2003 |
Okumoto Y, Fujiki H, Kawakami J, Nakashima S, Nakano S, Ohmichi T, Miyoshi D, Sugimoto N. Novel biomaterials derived from deoxyribozyme and NAPzyme Macromolecular Symposia. 201: 245-252. DOI: 10.1002/Masy.200351127 |
0.344 |
|
| 2002 |
Miyoshi D, Nakao A, Sugimoto N. Molecular crowding regulates the structural switch of the DNA G-quadruplex. Biochemistry. 41: 15017-24. PMID 12475251 DOI: 10.1021/Bi020412F |
0.387 |
|
| 2002 |
Ohmichi T, Nakano S, Miyoshi D, Sugimoto N. Long RNA dangling end has large energetic contribution to duplex stability. Journal of the American Chemical Society. 124: 10367-10372. PMID 12197739 DOI: 10.1021/Ja0255406 |
0.381 |
|
| 2002 |
Wu P, Kawamoto Y, Hara H, Sugimoto N. Effect of divalent cations and cytosine protonation on thermodynamic properties of intermolecular DNA double and triple helices. Journal of Inorganic Biochemistry. 91: 277-85. PMID 12121786 DOI: 10.1016/S0162-0134(02)00444-0 |
0.39 |
|
| 2002 |
Wu P, Nakano S, Sugimoto N. Temperature dependence of thermodynamic properties for DNA/DNA and RNA/DNA duplex formation. European Journal of Biochemistry. 269: 2821-30. PMID 12071944 DOI: 10.1046/J.1432-1033.2002.02970.X |
0.356 |
|
| 2002 |
Okumoto Y, Ohmichi T, Sugimoto N. Immobilized small deoxyribozyme to distinguish RNA secondary structures. Biochemistry. 41: 2769-2773. PMID 11851424 DOI: 10.1021/Bi011909C |
0.314 |
|
| 2002 |
Li W, Wu P, Ohmichi T, Sugimoto N. Characterization and thermodynamic properties of quadruplex/duplex competition Febs Letters. 526: 77-81. DOI: 10.1016/S0014-5793(02)03118-6 |
0.369 |
|
| 2001 |
Sugimoto N, Yasumatsu I. A new concept for the design of antisense oligonucleotides based on nucleic acid thermostability Current Medicinal Chemistry. Anti-Cancer Agents. 1: 95-112. PMID 12678772 DOI: 10.2174/1568011013354813 |
0.308 |
|
| 2001 |
Kawakami J, Kamiya H, Yasuda K, Fujiki H, Kasai H, Sugimoto N. Thermodynamic stability of base pairs between 2-hydroxyadenine and incoming nucleotides as a determinant of nucleotide incorporation specificity during replication. Nucleic Acids Research. 29: 3289-3296. PMID 11504865 DOI: 10.1093/Nar/29.16.3289 |
0.329 |
|
| 2001 |
Sugimoto N, Wu P, Hara H, Kawamoto Y. pH and cation effects on the properties of parallel pyrimidine motif DNA triplexes. Biochemistry. 40: 9396-9405. PMID 11478909 DOI: 10.1021/Bi010666L |
0.355 |
|
| 2001 |
Sugimoto N, Satoh N, Yasuda K, Nakano S. Stabilization factors affecting duplex formation of peptide nucleic acid with DNA. Biochemistry. 40: 8444-8451. PMID 11456481 DOI: 10.1021/Bi010480M |
0.325 |
|
| 2001 |
Miyoshi D, Nakao A, Toda T, Sugimoto N. Effect of divalent cations on antiparallel G-quartet structure of d(G4T4G4) Febs Letters. 496: 128-133. PMID 11356196 DOI: 10.1016/S0014-5793(01)02416-4 |
0.305 |
|
| 2001 |
Kawakami J, Yoneyama M, Miyoshi D, Sugimoto N. A Stable DNA Tetraloop and Its Structural Tolerance for Modification Chemistry Letters. 2001: 258-259. DOI: 10.1246/Cl.2001.258 |
0.366 |
|
| 2000 |
Sugimoto N. DNA recognition of a 24-mer peptide derived from RecA protein Biopolymers - Peptide Science Section. 55: 416-424. PMID 11304669 DOI: 10.1002/1097-0282(2000)55:6<416::Aid-Bip1017>3.0.Co;2-P |
0.345 |
|
| 2000 |
Kawakami J, Imanaka H, Yokota Y, Sugimoto N. In vitro selection of aptamers that act with Zn2 Journal of Inorganic Biochemistry. 82: 197-206. PMID 11132628 DOI: 10.1016/S0162-0134(00)00158-6 |
0.339 |
|
| 2000 |
Okumoto Y, Sugimoto N. Effects of metal ions and catalytic loop sequences on the complex formation of a deoxyribozyme and its RNA substrate Journal of Inorganic Biochemistry. 82: 189-195. PMID 11132626 DOI: 10.1016/S0162-0134(00)00159-8 |
0.326 |
|
| 2000 |
Wu P, Sugimoto N. Transition characteristics and thermodynamic analysis of DNA duplex formation: A quantitative consideration for the extent of duplex association Nucleic Acids Research. 28: 4762-4768. PMID 11095688 DOI: 10.1093/Nar/28.23.4762 |
0.327 |
|
| 2000 |
Sugimoto N, Nakano M, Nakano S. Thermodynamics-structure relationship of single mismatches in RNA/DNA duplexes. Biochemistry. 39: 11270-11281. PMID 10985772 DOI: 10.1021/Bi000819P |
0.397 |
|
| 2000 |
Sugimoto N. Development of Functional Nucleic Acids and Peptides by Combinatorial Chemistry and Downsizing Methods Journal of Synthetic Organic Chemistry Japan. 58: 1133-1143. DOI: 10.5059/Yukigoseikyokaishi.58.1133 |
0.371 |
|
| 2000 |
Ohmichi T, Nakamuta H, Yasuda aK, Sugimoto N. Kinetic Property of Bulged Helix Formation: Analysis of Kinetic Behavior Using Nearest-Neighbor Parameters Journal of the American Chemical Society. 122: 11286-11294. DOI: 10.1021/Ja001779F |
0.331 |
|
| 1999 |
Nakano S, Fujimoto M, Hara H, Sugimoto N. Nucleic acid duplex stability: influence of base composition on cation effects Nucleic Acids Research. 27: 2957-2965. PMID 10390539 DOI: 10.1093/Nar/27.14.2957 |
0.424 |
|
| 1999 |
Sugimoto N, Okumoto Y, Ohmichi T. Effect of metal ions and sequence of deoxyribozymes on their RNA cleavage activity Journal of the Chemical Society-Perkin Transactions 1. 1381-1386. DOI: 10.1039/A901461F |
0.337 |
|
| 1998 |
Ohmichi T, Okumoto Y, Sugimoto N. Effect of substrate RNA sequence on the cleavage reaction by a short ribozyme Nucleic Acids Research. 26: 5655-5661. PMID 9837996 DOI: 10.1093/Nar/26.24.5655 |
0.326 |
|
| 1998 |
Nakano S, Sugimoto N. Single-Stranded DNA Recognition of a 24-mer Peptide Derived from RecA Protein Bulletin of the Chemical Society of Japan. 71: 2205-2210. DOI: 10.1246/Bcsj.71.2205 |
0.356 |
|
| 1998 |
Kawakami J, Kawase Y, Sugimoto N. In vitro selection of aptamers that recognize a monosaccharide Analytica Chimica Acta. 365: 95-100. DOI: 10.1016/S0003-2670(97)00579-5 |
0.318 |
|
| 1997 |
Ohmichi T, Sugimoto N. Role of Nd3+ and Pb2+ on the RNA cleavage reaction by a small ribozyme Biochemistry. 36: 3514-3521. PMID 9132001 DOI: 10.1021/Bi962030D |
0.307 |
|
| 1997 |
Ohmichi T, Sugimoto N. Roles of 2′-Hydroxyls of Leadzyme on an RNA Cleavage Bulletin of the Chemical Society of Japan. 70: 2743-2747. DOI: 10.1246/Bcsj.70.2743 |
0.349 |
|
| 1997 |
Sugimoto N, Nakano S. A 24 mer peptide derived from RecA protein can discriminate a single-stranded DNA from a double-stranded DNA Chemical Communications. 2125-2126. DOI: 10.1039/A705575G |
0.326 |
|
| 1996 |
Sugimoto N, Nakano S, Yoneyama M, Honda K. Improved thermodynamic parameters and helix initiation factor to predict stability of DNA duplexes. Nucleic Acids Research. 24: 4501-4505. PMID 8948641 DOI: 10.1093/Nar/24.22.4501 |
0.387 |
|
| 1996 |
Sugimoto N, Nakano S, Katoh M, Sasaki M, Kugimiya S. Interactions Of 5-(1-Pyrenyl)-10,15,20-Tris(4-Methyl-Pyridinium)Porphine With Double-Helix And Triple-Helix Nucleic Acids Nucleosides, Nucleotides & Nucleic Acids. 15: 743-747. DOI: 10.1080/07328319608002420 |
0.312 |
|
| 1996 |
Sugimoto N, Ohmichi T, Sasaki M. The Stability of DNA and RNA G-Quartets † Nucleosides, Nucleotides & Nucleic Acids. 15: 559-567. DOI: 10.1080/07328319608002405 |
0.413 |
|
| 1995 |
Ide H, Murayama H, Sakamoto S, Makino K, Honda K, Nakamuta H, Sasaki M, Sugimoto N. On the mechanism of preferential incorporation of dAMP at abasic sites in translesional DNA synthesis. Role of proofreading activity of DNA polymerase and thermodynamic characterization of model template-primers containing an abasic site. Nucleic Acids Research. 23: 123-129. PMID 7870577 DOI: 10.1093/Nar/23.1.123 |
0.356 |
|
| 1995 |
Sugimoto N, Nakano S, Katoh M, Matsumura A, Nakamuta H, Ohmichi T, Yoneyama M, Sasaki M. Thermodynamic Parameters To Predict Stability of RNA/DNA Hybrid Duplexes Biochemistry. 34: 11211-11216. PMID 7545436 DOI: 10.1021/Bi00035A029 |
0.401 |
|
| 1994 |
Sugimoto N, Katoh M, Nakano S, Ohmichi T, Sasaki M. RNA/DNA hybrid duplexes with identical nearest-neighbor base-pairs have identical stability Febs Letters. 354: 74-78. PMID 7525350 DOI: 10.1016/0014-5793(94)01098-6 |
0.401 |
|
| 1994 |
Sugimoto N, Honda K, Sasaki M. Application of the Thermodynamic Parameters of DNA Stability Prediction to Double-Helix Formation of Deoxyribooligonucleotides Nucleosides, Nucleotides & Nucleic Acids. 13: 1311-1317. DOI: 10.1080/15257779408012153 |
0.302 |
|
| 1993 |
Sugimoto N. Relationship between Structure and Function of Nucleic Acids: The Study Using Nearest Neighbor Parameters. Seibutsu Butsuri. 33: 61-67. DOI: 10.2142/Biophys.33.61 |
0.342 |
|
| 1993 |
Sugimoto N, Sasaki M, Tanaka A. Relationship between catalytic activity and secondary structure of a hammerhead ribozyme: A study using thermodynamic parameters for RNA structure prediction Supramolecular Chemistry. 2: 99-102. DOI: 10.1080/10610279308038303 |
0.33 |
|
| 1992 |
Sugimoto N, Shintani Y, Tanaka A, Sasaki M. Thermodynamics of Triple-Helix and Double-Helix Formations by Octamers of Deoxyriboadenylic and Deoxyribothymidylic Acids Bulletin of the Chemical Society of Japan. 65: 535-540. DOI: 10.1246/Bcsj.65.535 |
0.302 |
|
| 1991 |
Sugimoto N, Tanaka A, Shintani Y, Sasaki M. Double-Helix Melting of Octamers of Deoxyriboadenylic and Deoxyribothymidylic Acids in the Presence of Ethidium Chemistry Letters. 20: 9-12. DOI: 10.1246/Cl.1991.9 |
0.322 |
|
| 1991 |
Sugimoto N, Sasaki M. Stabilization energy of the catalytic core of the Tetrahymena ribozyme Chemistry Letters. 20: 345-348. DOI: 10.1246/Cl.1991.345 |
0.33 |
|
| 1991 |
Sugimoto N, Matsumura A, Hasegawa K, Sasaki M. Effect of Unpaired Terminal Nucleotides of Substrate RNAs on the RNA Ligation with T4 RNA Ligase Bulletin of the Chemical Society of Japan. 64: 2978-2982. DOI: 10.1246/Bcsj.64.2978 |
0.343 |
|
| 1989 |
Sugimoto N, Sasaki M. Application of Improved Free-Energy Parameters of RNA Stability to Codon–Anticodon Interactions Bulletin of the Chemical Society of Japan. 62: 3745-3747. DOI: 10.1246/Bcsj.62.3745 |
0.357 |
|
| 1987 |
Sugimoto N, Kierzek R, Freier SM, Turner DH. Energetics of internal GU mismatches in ribooligonucleotide helixes. Biochemistry. 25: 5755-9. PMID 3778880 DOI: 10.1021/Bi00367A061 |
0.316 |
|
| 1986 |
Freier SM, Kierzek R, Jaeger JA, Sugimoto N, Caruthers MH, Neilson T, Turner DH. Improved free-energy parameters for predictions of RNA duplex stability. Proceedings of the National Academy of Sciences of the United States of America. 83: 9373-7. PMID 2432595 DOI: 10.1073/Pnas.83.24.9373 |
0.339 |
|
| Show low-probability matches. |