| Year |
Citation |
Score |
| 2023 |
Lu F, Park BJ, Fujiwara R, Wilusz JE, Gilmour DS, Lehmann R, Lionnet T. Integrator-mediated clustering of poised RNA polymerase II synchronizes histone transcription. Biorxiv : the Preprint Server For Biology. PMID 37873455 DOI: 10.1101/2023.10.07.561364 |
0.435 |
|
| 2023 |
Dollinger R, Deng EB, Schultz J, Wu S, Deorio HR, Gilmour DS. DSIF directly facilitates promoter proximal pausing of RNA Polymerase II. The Journal of Biological Chemistry. 105106. PMID 37517697 DOI: 10.1016/j.jbc.2023.105106 |
0.617 |
|
| 2021 |
Dollinger R, Gilmour DS. Regulation of Promoter Proximal Pausing of RNA Polymerase II in Metazoans. Journal of Molecular Biology. 166897. PMID 33640324 DOI: 10.1016/j.jmb.2021.166897 |
0.522 |
|
| 2020 |
Marygold SJ, Alic N, Gilmour DS, Grewal SS. identification of genes encoding RNA polymerase subunits. Micropublication Biology. 2020. PMID 33274328 DOI: 10.17912/micropub.biology.000320 |
0.392 |
|
| 2019 |
Lu F, Portz B, Gilmour DS. The C-Terminal Domain of RNA Polymerase II Is a Multivalent Targeting Sequence that Supports Drosophila Development with Only Consensus Heptads. Molecular Cell. PMID 30765194 DOI: 10.1016/J.Molcel.2019.01.008 |
0.61 |
|
| 2019 |
Lu F, Gilmour DS. Genetic analysis of the RNA polymerase II CTD in Drosophila. Methods (San Diego, Calif.). PMID 30684537 DOI: 10.1016/j.ymeth.2019.01.010 |
0.543 |
|
| 2017 |
Baumann DG, Dai MS, Lu H, Gilmour DS. GFZF, a glutathione S-transferase protein implicated in cell cycle regulation and hybrid inviability, is a transcriptional co-activator. Molecular and Cellular Biology. PMID 29158293 DOI: 10.1128/MCB.00476-17 |
0.302 |
|
| 2017 |
Baumann DG, Gilmour DS. A sequence-specific core promoter-binding transcription factor recruits TRF2 to coordinately transcribe ribosomal protein genes. Nucleic Acids Research. PMID 28977400 DOI: 10.1093/nar/gkx676 |
0.314 |
|
| 2017 |
Gibbs EB, Lu F, Portz B, Fisher MJ, Medellin BP, Laremore TN, Zhang YJ, Gilmour DS, Showalter SA. Phosphorylation induces sequence-specific conformational switches in the RNA polymerase II C-terminal domain. Nature Communications. 8: 15233. PMID 28497798 DOI: 10.1038/Ncomms15233 |
0.622 |
|
| 2017 |
Portz B, Lu F, Gibbs EB, Mayfield JE, Rachel Mehaffey M, Zhang YJ, Brodbelt JS, Showalter SA, Gilmour DS. Structural heterogeneity in the intrinsically disordered RNA polymerase II C-terminal domain. Nature Communications. 8: 15231. PMID 28497792 DOI: 10.1038/Ncomms15231 |
0.611 |
|
| 2017 |
Qiu Y, Gilmour DS. Identification of Regions in the Spt5 Subunit of DSIF That Are Involved in Promoter Proximal Pausing. The Journal of Biological Chemistry. PMID 28213523 DOI: 10.1074/jbc.M116.760751 |
0.561 |
|
| 2017 |
Mayfield JE, Robinson MR, Cotham VC, Irani S, Matthews WL, Ram A, Gilmour DS, Cannon JR, Zhang YJ, Brodbelt JS. Mapping the Phosphorylation Pattern of Drosophila melanogaster RNA Polymerase II Carboxyl-Terminal Domain Using Ultraviolet Photodissociation Mass Spectrometry. Acs Chemical Biology. 12: 153-162. PMID 28103682 DOI: 10.1021/Acschembio.6B00729 |
0.613 |
|
| 2015 |
Li J, Gilmour DS. Reconstitution of factor-dependent, promoter proximal pausing in Drosophila nuclear extracts. Methods in Molecular Biology (Clifton, N.J.). 1276: 133-52. PMID 25665561 DOI: 10.1007/978-1-4939-2392-2_7 |
0.501 |
|
| 2013 |
Natarajan M, Schiralli Lester GM, Lee C, Missra A, Wasserman GA, Steffen M, Gilmour DS, Henderson AJ. Negative elongation factor (NELF) coordinates RNA polymerase II pausing, premature termination, and chromatin remodeling to regulate HIV transcription. The Journal of Biological Chemistry. 288: 25995-6003. PMID 23884411 DOI: 10.1074/Jbc.M113.496489 |
0.322 |
|
| 2013 |
Li J, Liu Y, Rhee HS, Ghosh SK, Bai L, Pugh BF, Gilmour DS. Kinetic competition between elongation rate and binding of NELF controls promoter-proximal pausing. Molecular Cell. 50: 711-22. PMID 23746353 DOI: 10.1016/J.Molcel.2013.05.016 |
0.514 |
|
| 2013 |
Li J, Gilmour DS. Distinct mechanisms of transcriptional pausing orchestrated by GAGA factor and M1BP, a novel transcription factor. The Embo Journal. 32: 1829-41. PMID 23708796 DOI: 10.1038/emboj.2013.111 |
0.398 |
|
| 2013 |
Lagha M, Bothma JP, Esposito E, Ng S, Stefanik L, Tsui C, Johnston J, Chen K, Gilmour DS, Zeitlinger J, Levine MS. Paused Pol II coordinates tissue morphogenesis in the Drosophila embryo. Cell. 153: 976-87. PMID 23706736 DOI: 10.1016/J.Cell.2013.04.045 |
0.366 |
|
| 2011 |
Cernilogar FM, Onorati MC, Kothe GO, Burroughs AM, Parsi KM, Breiling A, Lo Sardo F, Saxena A, Miyoshi K, Siomi H, Siomi MC, Carninci P, Gilmour DS, Corona DF, Orlando V. Chromatin-associated RNA interference components contribute to transcriptional regulation in Drosophila. Nature. 480: 391-5. PMID 22056986 DOI: 10.1038/Nature10492 |
0.508 |
|
| 2011 |
Fay A, Misulovin Z, Li J, Schaaf CA, Gause M, Gilmour DS, Dorsett D. Cohesin selectively binds and regulates genes with paused RNA polymerase. Current Biology : Cb. 21: 1624-34. PMID 21962715 DOI: 10.1016/j.cub.2011.08.036 |
0.441 |
|
| 2011 |
Ghosh SK, Missra A, Gilmour DS. Negative elongation factor accelerates the rate at which heat shock genes are shut off by facilitating dissociation of heat shock factor. Molecular and Cellular Biology. 31: 4232-43. PMID 21859888 DOI: 10.1128/MCB.05930-11 |
0.374 |
|
| 2011 |
Kruk JA, Dutta A, Fu J, Gilmour DS, Reese JC. The multifunctional Ccr4-Not complex directly promotes transcription elongation. Genes & Development. 25: 581-93. PMID 21406554 DOI: 10.1101/Gad.2020911 |
0.402 |
|
| 2011 |
Li J, Gilmour DS. Promoter proximal pausing and the control of gene expression. Current Opinion in Genetics & Development. 21: 231-5. PMID 21324670 DOI: 10.1016/j.gde.2011.01.010 |
0.417 |
|
| 2010 |
Missra A, Gilmour DS. Interactions between DSIF (DRB sensitivity inducing factor), NELF (negative elongation factor), and the Drosophila RNA polymerase II transcription elongation complex. Proceedings of the National Academy of Sciences of the United States of America. 107: 11301-6. PMID 20534440 DOI: 10.1073/pnas.1000681107 |
0.559 |
|
| 2009 |
Gilmour DS, Fan R. Detecting transcriptionally engaged RNA polymerase in eukaryotic cells with permanganate genomic footprinting. Methods (San Diego, Calif.). 48: 368-74. PMID 19272453 DOI: 10.1016/j.ymeth.2009.02.020 |
0.524 |
|
| 2009 |
Gilmour DS. Promoter proximal pausing on genes in metazoans. Chromosoma. 118: 1-10. PMID 18830703 DOI: 10.1007/s00412-008-0182-4 |
0.382 |
|
| 2008 |
Gilchrist DA, Nechaev S, Lee C, Ghosh SK, Collins JB, Li L, Gilmour DS, Adelman K. NELF-mediated stalling of Pol II can enhance gene expression by blocking promoter-proximal nucleosome assembly. Genes & Development. 22: 1921-33. PMID 18628398 DOI: 10.1101/gad.1643208 |
0.446 |
|
| 2008 |
Li P, Yao H, Zhang Z, Li M, Luo Y, Thompson PR, Gilmour DS, Wang Y. Regulation of p53 target gene expression by peptidylarginine deiminase 4. Molecular and Cellular Biology. 28: 4745-58. PMID 18505818 DOI: 10.1128/Mcb.01747-07 |
0.316 |
|
| 2008 |
Mavrich TN, Jiang C, Ioshikhes IP, Li X, Venters BJ, Zanton SJ, Tomsho LP, Qi J, Glaser RL, Schuster SC, Gilmour DS, Albert I, Pugh BF. Nucleosome organization in the Drosophila genome. Nature. 453: 358-62. PMID 18408708 DOI: 10.1038/Nature06929 |
0.383 |
|
| 2008 |
Lee C, Li X, Hechmer A, Eisen M, Biggin MD, Venters BJ, Jiang C, Li J, Pugh BF, Gilmour DS. NELF and GAGA factor are linked to promoter-proximal pausing at many genes in Drosophila. Molecular and Cellular Biology. 28: 3290-300. PMID 18332113 DOI: 10.1128/Mcb.02224-07 |
0.537 |
|
| 2008 |
Klatt A, Zhang Z, Kalantari P, Hankey PA, Gilmour DS, Henderson AJ. The receptor tyrosine kinase RON represses HIV-1 transcription by targeting RNA polymerase II processivity. Journal of Immunology (Baltimore, Md. : 1950). 180: 1670-7. PMID 18209063 DOI: 10.4049/Jimmunol.180.3.1670 |
0.392 |
|
| 2008 |
Gilmour DS, Fan R. Derailing the locomotive: transcription termination. The Journal of Biological Chemistry. 283: 661-4. PMID 17998201 DOI: 10.1074/jbc.R700032200 |
0.399 |
|
| 2007 |
Zhang Z, Klatt A, Henderson AJ, Gilmour DS. Transcription termination factor Pcf11 limits the processivity of Pol II on an HIV provirus to repress gene expression. Genes & Development. 21: 1609-14. PMID 17606639 DOI: 10.1101/Gad.1542707 |
0.523 |
|
| 2007 |
Wang X, Lee C, Gilmour DS, Gergen JP. Transcription elongation controls cell fate specification in the Drosophila embryo. Genes & Development. 21: 1031-6. PMID 17473169 DOI: 10.1101/gad.1521207 |
0.433 |
|
| 2007 |
Zhang Z, Klatt A, Gilmour DS, Henderson AJ. Negative elongation factor NELF represses human immunodeficiency virus transcription by pausing the RNA polymerase II complex. The Journal of Biological Chemistry. 282: 16981-8. PMID 17442680 DOI: 10.1074/Jbc.M610688200 |
0.476 |
|
| 2006 |
Zhang Z, Gilmour DS. Pcf11 is a termination factor in Drosophila that dismantles the elongation complex by bridging the CTD of RNA polymerase II to the nascent transcript. Molecular Cell. 21: 65-74. PMID 16387654 DOI: 10.1016/j.molcel.2005.11.002 |
0.59 |
|
| 2005 |
Zhang Z, Fu J, Gilmour DS. CTD-dependent dismantling of the RNA polymerase II elongation complex by the pre-mRNA 3'-end processing factor, Pcf11. Genes & Development. 19: 1572-80. PMID 15998810 DOI: 10.1101/gad.1296305 |
0.628 |
|
| 2005 |
Wang YV, Tang H, Gilmour DS. Identification in vivo of different rate-limiting steps associated with transcriptional activators in the presence and absence of a GAGA element. Molecular and Cellular Biology. 25: 3543-52. PMID 15831460 DOI: 10.1128/MCB.25.9.3543-3552.2005 |
0.383 |
|
| 2005 |
Wu CH, Lee C, Fan R, Smith MJ, Yamaguchi Y, Handa H, Gilmour DS. Molecular characterization of Drosophila NELF. Nucleic Acids Research. 33: 1269-79. PMID 15741180 DOI: 10.1093/Nar/Gki274 |
0.364 |
|
| 2004 |
Zhang Z, Wu CH, Gilmour DS. Analysis of polymerase II elongation complexes by native gel electrophoresis. Evidence for a novel carboxyl-terminal domain-mediated termination mechanism. The Journal of Biological Chemistry. 279: 23223-8. PMID 15056674 DOI: 10.1074/jbc.M402956200 |
0.485 |
|
| 2003 |
Wu CH, Yamaguchi Y, Benjamin LR, Horvat-Gordon M, Washinsky J, Enerly E, Larsson J, Lambertsson A, Handa H, Gilmour D. NELF and DSIF cause promoter proximal pausing on the hsp70 promoter in Drosophila. Genes & Development. 17: 1402-14. PMID 12782658 DOI: 10.1101/Gad.1091403 |
0.366 |
|
| 1989 |
Gilmour DS, Thomas GH, Elgin SC. Drosophila nuclear proteins bind to regions of alternating C and T residues in gene promoters. Science (New York, N.Y.). 245: 1487-90. PMID 2781290 DOI: 10.1126/Science.2781290 |
0.318 |
|
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