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Qianwen Sun - Publications

Affiliations: 
Tsinghua National University, Beijing, Beijing Shi, China 
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35 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Zhang W, Yang Z, Wang W, Sun Q. Author Correction: Primase promotes the competition between transcription and replication on the same template strand resulting in DNA damage. Nature Communications. 15: 521. PMID 38225289 DOI: 10.1038/s41467-024-44904-0  0.351
2024 Zhang W, Yang Z, Wang W, Sun Q. Primase promotes the competition between transcription and replication on the same template strand resulting in DNA damage. Nature Communications. 15: 73. PMID 38168108 DOI: 10.1038/s41467-023-44443-0  0.382
2023 Liu X, Liu X, Du Y, Zou D, Tian C, Li Y, Lan X, David CJ, Sun Q, Chen M. Aberrant accumulation of Kras-dependent pervasive transcripts during tumor progression renders cancer cells dependent on PAF1 expression. Cell Reports. 42: 112979. PMID 37572321 DOI: 10.1016/j.celrep.2023.112979  0.435
2023 Zhou J, Lei X, Shafiq S, Zhang W, Li Q, Li K, Zhu J, Dong Z, He XJ, Sun Q. DDM1-mediated R-loop resolution and H2A.Z exclusion facilitates heterochromatin formation in Arabidopsis. Science Advances. 9: eadg2699. PMID 37566662 DOI: 10.1126/sciadv.adg2699  0.376
2023 Liu C, Wang L, Li Y, Guo M, Hu J, Wang T, Li M, Yang Z, Lin R, Xu W, Chen Y, Luo M, Gao F, Chen JY, Sun Q, et al. RNase H1 facilitates recombinase recruitment by degrading DNA-RNA hybrids during meiosis. Nucleic Acids Research. PMID 37378420 DOI: 10.1093/nar/gkad524  0.343
2022 Manavella PA, Herz MAG, Kornblihtt AR, Sorenson R, Sieburth LE, Nakaminami K, Seki M, Ding Y, Sun Q, Kang H, Ariel FD, Crespi M, Giudicatti A, Cai Q, Jin H, et al. Beyond transcription: compelling open questions in plant RNA biology. The Plant Cell. PMID 36477566 DOI: 10.1093/plcell/koac346  0.305
2022 Zhou J, Zhang W, Sun Q. R-loop: The new genome regulatory element in plants. Journal of Integrative Plant Biology. PMID 36223078 DOI: 10.1111/jipb.13383  0.312
2022 Chen L, Wang Y, Lin J, Song Z, Wang Q, Zhao W, Wang Y, Xiu X, Deng Y, Li X, Li Q, Wang X, Li J, Liu X, Liu K, ... ... Sun Q, et al. Exportin 4 depletion leads to nuclear accumulation of a subset of circular RNAs. Nature Communications. 13: 5769. PMID 36182935 DOI: 10.1038/s41467-022-33356-z  0.376
2022 Xiao Q, Huang X, Zhang Y, Xu W, Yang Y, Zhang Q, Hu Z, Xing F, Sun Q, Li G, Li X. The landscape of promoter-centred RNA-DNA interactions in rice. Nature Plants. PMID 35115727 DOI: 10.1038/s41477-021-01089-4  0.362
2021 Chen L, Xu W, Liu K, Jiang Z, Han Y, Jin H, Zhang L, Shen W, Jia S, Sun Q, Meng A. 5' Half of specific tRNAs feeds back to promote corresponding tRNA gene transcription in vertebrate embryos. Science Advances. 7: eabh0494. PMID 34797706 DOI: 10.1126/sciadv.abh0494  0.451
2021 Liu K, Sun Q. Intragenic tRNA-promoted R-loops orchestrate transcription interference for plant oxidative stress responses. The Plant Cell. PMID 34463741 DOI: 10.1093/plcell/koab220  0.537
2021 Liu Y, Liu Q, Su H, Liu K, Xiao X, Li W, Sun Q, Birchler JA, Han F. Genome-wide mapping reveals R-loops associated with centromeric repeats in maize. Genome Research. PMID 34244230 DOI: 10.1101/gr.275270.121  0.312
2020 Yan P, Liu Z, Song M, Wu Z, Xu W, Li K, Ji Q, Wang S, Liu X, Yan K, Esteban CR, Ci W, Belmonte JCI, Xie W, Ren J, ... ... Sun Q, et al. Genome-wide R-loop Landscapes during Cell Differentiation and Reprogramming. Cell Reports. 32: 107870. PMID 32640235 DOI: 10.1016/j.celrep.2020.107870  0.335
2020 Zhu Y, Hu X, Duan Y, Li S, Wang Y, Rehman AU, He J, Zhang J, Hua D, Yang L, Wang L, Chen Z, Li C, Wang B, Song CP, ... Sun Q, et al. The Arabidopsis Nodulin Homeobox Factor AtNDX Interacts with AtRING1A/B and Negatively Regulates Abscisic Acid Signaling. The Plant Cell. PMID 31919300 DOI: 10.1105/tpc.19.00604  0.306
2020 Yang Z, Li M, Sun Q. RHON1 Co-transcriptionally Resolves R-Loops for Arabidopsis Chloroplast Genome Maintenance. Cell Reports. 30: 243-256.e5. PMID 31914390 DOI: 10.1016/j.celrep.2019.12.007  0.325
2019 Sun Q, Huang J, Guo Y, Yang M, Guo Y, Li J, Zhang J, Xu W. A cotton NAC domain transcription factor, GhFSN5, negatively regulates secondary cell wall biosynthesis and anther development in transgenic Arabidopsis. Plant Physiology and Biochemistry : Ppb. 146: 303-314. PMID 31783206 DOI: 10.1016/j.plaphy.2019.11.030  0.355
2019 Zhou J, Liu L, Li Q, Xu W, Li K, Wang ZW, Sun Q. Intronic heterochromatin prevents cryptic transcription initiation in Arabidopsis. The Plant Journal : For Cell and Molecular Biology. PMID 31647592 DOI: 10.1111/tpj.14584  0.527
2019 Yang X, Liu QL, Xu W, Zhang YC, Yang Y, Ju LF, Chen J, Chen YS, Li K, Ren J, Sun Q, Yang YG. mA promotes R-loop formation to facilitate transcription termination. Cell Research. PMID 31606733 DOI: 10.1038/s41422-019-0235-7  0.425
2019 Yuan W, Zhou J, Tong J, Zhuo W, Wang L, Li Y, Sun Q, Qian W. ALBA protein complex reads genic R-loops to maintain genome stability in . Science Advances. 5: eaav9040. PMID 31106272 DOI: 10.1126/sciadv.aav9040  0.323
2018 Huang J, Guo Y, Sun Q, Zeng W, Li J, Li X, Xu W. Genome-Wide Identification of R2R3-MYB Transcription Factors Regulating Secondary Cell Wall Thickening in Cotton Fiber Development. Plant & Cell Physiology. PMID 30576529 DOI: 10.1093/pcp/pcy238  0.306
2018 Cheng L, Shafiq S, Xu W, Sun Q. EARLY FLOWERING IN SHORT DAYS (EFS) regulates the seed size in Arabidopsis. Science China. Life Sciences. PMID 29372509 DOI: 10.1007/s11427-017-9236-x  0.441
2017 Yang Z, Hou Q, Cheng L, Xu W, Hong Y, Li S, Sun Q. RNase H1 Cooperates with DNA Gyrases to Restrict R-loops and Maintain Genome Integrity in Arabidopsis Chloroplasts. The Plant Cell. PMID 28939594 DOI: 10.1105/tpc.17.00305  0.357
2017 Xu W, Xu H, Li K, Fan Y, Liu Y, Yang X, Sun Q. The R-loop is a common chromatin feature of the Arabidopsis genome. Nature Plants. PMID 28848233 DOI: 10.1038/S41477-017-0004-X  0.368
2017 Shafiq S, Chen C, Yang J, Cheng L, Ma F, Widemann E, Sun Q. DNA Topoisomerase 1 prevents R-loop accumulation to modulate auxin-regulated root development in rice. Molecular Plant. PMID 28412545 DOI: 10.1016/j.molp.2017.04.001  0.488
2016 Shafiq S, Li J, Sun Q. Functions of plants long non-coding RNAs. Biochimica Et Biophysica Acta. 1859: 155-62. PMID 26112461 DOI: 10.1016/j.bbagrm.2015.06.009  0.34
2015 Hu Y, Sun Q, Zhang C, Sha Q, Sun X. RE1 silencing transcription factor (REST) negatively regulates ALL1-fused from chromosome 1q (AF1q) gene transcription. Bmc Molecular Biology. 16: 15. PMID 26341630 DOI: 10.1186/s12867-015-0043-7  0.502
2014 Csorba T, Questa JI, Sun Q, Dean C. Antisense COOLAIR mediates the coordinated switching of chromatin states at FLC during vernalization. Proceedings of the National Academy of Sciences of the United States of America. 111: 16160-5. PMID 25349421 DOI: 10.1073/Pnas.1419030111  0.538
2014 Wang ZW, Wu Z, Raitskin O, Sun Q, Dean C. Antisense-mediated FLC transcriptional repression requires the P-TEFb transcription elongation factor. Proceedings of the National Academy of Sciences of the United States of America. 111: 7468-73. PMID 24799695 DOI: 10.1073/Pnas.1406635111  0.569
2014 Marquardt S, Raitskin O, Wu Z, Liu F, Sun Q, Dean C. Functional consequences of splicing of the antisense transcript COOLAIR on FLC transcription. Molecular Cell. 54: 156-65. PMID 24725596 DOI: 10.1016/J.Molcel.2014.03.026  0.556
2013 Zhong X, Zhang H, Zhao Y, Sun Q, Hu Y, Peng H, Zhou DX. The rice NAD(+)-dependent histone deacetylase OsSRT1 targets preferentially to stress- and metabolism-related genes and transposable elements. Plos One. 8: e66807. PMID 23825566 DOI: 10.1371/journal.pone.0066807  0.381
2013 Sun Q, Csorba T, Skourti-Stathaki K, Proudfoot NJ, Dean C. R-loop stabilization represses antisense transcription at the Arabidopsis FLC locus. Science (New York, N.Y.). 340: 619-21. PMID 23641115 DOI: 10.1126/Science.1234848  0.531
2010 Qin FJ, Sun QW, Huang LM, Chen XS, Zhou DX. Rice SUVH histone methyltransferase genes display specific functions in chromatin modification and retrotransposon repression. Molecular Plant. 3: 773-82. PMID 20566579 DOI: 10.1093/mp/ssq030  0.393
2009 Hu Y, Qin F, Huang L, Sun Q, Li C, Zhao Y, Zhou DX. Rice histone deacetylase genes display specific expression patterns and developmental functions. Biochemical and Biophysical Research Communications. 388: 266-71. PMID 19664599 DOI: 10.1016/j.bbrc.2009.07.162  0.389
2008 Sun Q, Zhou DX. Rice jmjC domain-containing gene JMJ706 encodes H3K9 demethylase required for floral organ development Proceedings of the National Academy of Sciences of the United States of America. 105: 13679-13684. PMID 18765808 DOI: 10.1073/pnas.0805901105  0.425
2007 Huang L, Sun Q, Qin F, Li C, Zhao Y, Zhou DX. Down-regulation of a SILENT INFORMATION REGULATOR2-related histone deacetylase gene, OsSRT1, induces DNA fragmentation and cell death in rice. Plant Physiology. 144: 1508-19. PMID 17468215 DOI: 10.1104/pp.107.099473  0.459
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