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Jeremiah James Zartman - Publications

Affiliations: 
2009 Princeton University, Princeton, NJ 
Website:
https://engineering.nd.edu/profiles/jzartman
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50 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Shaikh R, Larson NJ, Hanjaya-Putra D, Zartman J, Umulis DM, Li L, Reeves GT. Optimal Performance Objectives in the Highly Conserved Bone Morphogenetic Protein Signaling Pathway. Biorxiv : the Preprint Server For Biology. PMID 38370840 DOI: 10.1101/2024.02.01.578451  0.68
2023 Mim MS, Knight C, Zartman J. Quantitative insights in tissue growth and morphogenesis with optogenetics. Physical Biology. PMID 37678266 DOI: 10.1088/1478-3975/acf7a1  0.368
2023 Flores-Flores M, Muñoz-Nava LM, Rodríguez-Muñoz R, Zartman J, Nahmad M. Vestigial-dependent induction contributes to robust patterning but is not essential for wing-fate recruitment in Drosophila. Biology Open. 12. PMID 37199309 DOI: 10.1242/bio.059908  0.336
2023 Velagala V, Soundarrajan DK, Unger MF, Gazzo D, Kumar N, Li J, Zartman J. The multimodal action of G alpha q in coordinating growth and homeostasis in the wing imaginal disc. Biorxiv : the Preprint Server For Biology. PMID 36711848 DOI: 10.1101/2023.01.08.523049  0.771
2022 Kumar N, Huizar FJ, Farfán-Pira KJ, Brodskiy PA, Soundarrajan DK, Nahmad M, Zartman JJ. MAPPER: An Open-Source, High-Dimensional Image Analysis Pipeline Unmasks Differential Regulation of Wing Features. Frontiers in Genetics. 13: 869719. PMID 35480325 DOI: 10.3389/fgene.2022.869719  0.762
2021 Soundarrajan DK, Huizar FJ, Paravitorghabeh R, Robinett T, Zartman JJ. From spikes to intercellular waves: Tuning intercellular calcium signaling dynamics modulates organ size control. Plos Computational Biology. 17: e1009543. PMID 34723960 DOI: 10.1371/journal.pcbi.1009543  0.803
2020 Nematbakhsh A, Levis M, Kumar N, Chen W, Zartman JJ, Alber M. Epithelial organ shape is generated by patterned actomyosin contractility and maintained by the extracellular matrix. Plos Computational Biology. 16: e1008105. PMID 32817654 DOI: 10.1371/Journal.Pcbi.1008105  0.649
2020 Howe EN, Burnette MD, Justice ME, Schnepp PM, Hedrick V, Clancy JW, Guldner IH, Lamere AT, Li J, Aryal UK, D'Souza-Schorey C, Zartman JJ, Zhang S. Rab11b-mediated integrin recycling promotes brain metastatic adaptation and outgrowth. Nature Communications. 11: 3017. PMID 32541798 DOI: 10.1038/S41467-020-16832-2  0.769
2020 Kumar FN, Huizar F, Unger M, Soundarrajan D, Velagala V, Koren J, Zartman JJ. Neurotransmitter Receptors as Key Physiological Regulators of Epithelial Morphogenesis Biophysical Journal. 118: 93a. DOI: 10.1016/J.Bpj.2019.11.673  0.759
2019 Levis M, Ontiveros F, Juan J, Kavanagh A, Zartman JJ. Rapid Fabrication of Custom Microfluidic Devices for Research and Educational Applications. Journal of Visualized Experiments : Jove. PMID 31814613 DOI: 10.3791/60307  0.588
2019 Huizar F, Soundarrajan D, Paravitorghabeh R, Zartman J. Interplay between morphogen-directed positional information systems and physiological signaling. Developmental Dynamics : An Official Publication of the American Association of Anatomists. PMID 31794137 DOI: 10.1002/Dvdy.140  0.808
2019 Sample M, Boulicault M, Allen C, Bashir R, Hyun I, Levis M, Lowenthal C, Mertz D, Montserrat N, Palmer MJ, Saha K, Zartman J. Multi-cellular engineered living systems: building a community around responsible research on emergence. Biofabrication. PMID 31158828 DOI: 10.1088/1758-5090/Ab268C  0.588
2019 Rodriguez K, Howe E, Bacher E, Burnette M, Meloche J, Meisel J, Schnepp P, Tan X, Chang M, Zartman J, Zhang S, Ashfeld BL. Combined Scaffold Evaluation and Systems-level Transcriptome-Based Analysis for Accelerated Lead Optimization Reveals Ribosomal Targeting Spirooxindole Cyclopropanes. Chemmedchem. PMID 31140738 DOI: 10.1002/Cmdc.201900266  0.77
2019 Levis M, Kumar N, Apakian E, Moreno C, Hernandez U, Olivares A, Ontiveros F, Zartman JJ. Microfluidics on the fly: Inexpensive rapid fabrication of thermally laminated microfluidic devices for live imaging and multimodal perturbations of multicellular systems. Biomicrofluidics. 13: 024111. PMID 31065310 DOI: 10.1063/1.5086671  0.618
2019 Wu Q, Kumar N, Velagala V, Zartman JJ. Tools to reverse-engineer multicellular systems: case studies using the fruit fly. Journal of Biological Engineering. 13: 33. PMID 31049075 DOI: 10.1186/S13036-019-0161-8  0.717
2019 Breuer EK, Fukushiro-Lopes D, Dalheim A, Burnette M, Zartman J, Kaja S, Wells C, Campo L, Curtis KJ, Romero-Moreno R, Littlepage LE, Niebur GL, Hoskins K, Nishimura MI, Gentile S. Potassium channel activity controls breast cancer metastasis by affecting β-catenin signaling. Cell Death & Disease. 10: 180. PMID 30792401 DOI: 10.1038/S41419-019-1429-0  0.657
2019 Brodskiy PA, Wu Q, Soundarrajan DK, Huizar FJ, Chen J, Liang P, Narciso C, Levis MK, Arredondo-Walsh N, Chen DZ, Zartman JJ. Decoding Calcium Signaling Dynamics during Drosophila Wing Disc Development. Biophysical Journal. PMID 30704858 DOI: 10.1016/J.Bpj.2019.01.007  0.744
2019 Rodriguez KX, Howe EN, Bacher EP, Burnette M, Meloche JL, Meisel J, Schnepp P, Tan X, Chang M, Zartman J, Zhang S, Ashfeld BL. Front Cover: Combined Scaffold Evaluation and Systems‐Level Transcriptome‐Based Analysis for Accelerated Lead Optimization Reveals Ribosomal Targeting Spirooxindole Cyclopropanes (ChemMedChem 18/2019) Chemmedchem. 14: 1618-1618. DOI: 10.1002/Cmdc.201900502  0.75
2018 Liang P, Chen J, Brodskiy PA, Wu Q, Zhang Y, Zhang Y, Yang L, Zartman JJ, Chen DZ. A NEW REGISTRATION APPROACH FOR DYNAMIC ANALYSIS OF CALCIUM SIGNALS IN ORGANS. Proceedings. Ieee International Symposium On Biomedical Imaging. 2018: 934-937. PMID 32699575 DOI: 10.1109/isbi.2018.8363724  0.794
2018 Brodskiy PA, Zartman JJ. Calcium as a signal integrator in developing epithelial tissues. Physical Biology. 15: 051001. PMID 29611534 DOI: 10.1088/1478-3975/Aabb18  0.803
2018 Fukushiro-Lopes DF, Hegel AD, Rao V, Wyatt D, Baker A, Breuer EK, Osipo C, Zartman JJ, Burnette M, Kaja S, Kouzoukas D, Burris S, Jones WK, Gentile S. Preclinical study of a Kv11.1 potassium channel activator as antineoplastic approach for breast cancer. Oncotarget. 9: 3321-3337. PMID 29423049 DOI: 10.18632/Oncotarget.22925  0.629
2018 Brodskiy PA, Wu Q, Kumar NK, Naidu Velagala VK, Snyder KL, Huizar FJ, Tautges SJ, Snyder M, Zartman JJ. Mapping the calcium signalsome during Drosophila wing development Ifac-Papersonline. 51: 108-109. DOI: 10.1016/J.Ifacol.2018.09.019  0.798
2018 Kumar N, Brodsky P, Zartman J. Single cell analysis of oscillatory Ca2+ signalling in epithelial cells Ifac-Papersonline. 51: 116-117. DOI: 10.1016/J.Ifacol.2018.09.014  0.41
2018 Torghabeh RP, Zartman JJ. Modeling intercellular calcium dynamics in an epithelial organ using Dynamic Mode Decomposition Ifac-Papersonline. 51: 120-123. DOI: 10.1016/J.Ifacol.2018.09.011  0.396
2017 Narciso C, Zartman J. Reverse-engineering organogenesis through feedback loops between model systems. Current Opinion in Biotechnology. 52: 1-8. PMID 29275226 DOI: 10.1016/J.Copbio.2017.12.009  0.787
2017 Höök P, Brito-Robinson T, Kim O, Narciso C, Goodson HV, Weisel JW, Alber MS, Zartman JJ. Whole blood clot optical clearing for nondestructive 3D imaging and quantitative analysis. Biomedical Optics Express. 8: 3671-3686. PMID 28856043 DOI: 10.1364/Boe.8.003671  0.763
2017 Narciso CE, Contento NM, Storey TJ, Hoelzle DJ, Zartman JJ. Release of Applied Mechanical Loading Stimulates Intercellular Calcium Waves in Drosophila Wing Discs. Biophysical Journal. 113: 491-501. PMID 28746859 DOI: 10.1016/J.Bpj.2017.05.051  0.785
2017 Nematbakhsh A, Sun W, Brodskiy PA, Amiri A, Narciso C, Xu Z, Zartman JJ, Alber M. Multi-scale computational study of the mechanical regulation of cell mitotic rounding in epithelia. Plos Computational Biology. 13: e1005533. PMID 28531187 DOI: 10.1371/Journal.Pcbi.1005533  0.773
2017 Breuer E, Osipo C, Zartman J, Wells C, Nishimura M, Jones W, Gentile S. Abstract B38: Exploring targeting potassium channels in cancer: A novel strategy for therapeutic intervention Molecular Cancer Therapeutics. 16. DOI: 10.1158/1538-8514.Synthleth-B38  0.305
2016 Kursawe J, Bardenet R, Zartman JJ, Baker RE, Fletcher AG. Robust cell tracking in epithelial tissues through identification of maximum common subgraphs. Journal of the Royal Society, Interface. 13. PMID 28334699 DOI: 10.1098/Rsif.2016.0725  0.371
2016 Restrepo S, Zartman JJ, Basler K. Cultivation and Live Imaging of Drosophila Imaginal Discs. Methods in Molecular Biology (Clifton, N.J.). 1478: 203-213. PMID 27730583 DOI: 10.1007/978-1-4939-6371-3_11  0.554
2016 Narciso C, Cowdrick KR, Zellmer V, Brito-Robinson T, Brodskiy P, Hoelzle DJ, Zhang S, Zartman JJ. On-chip three-dimensional tissue histology for microbiopsies Biomicrofluidics. 10. DOI: 10.1063/1.4941708  0.748
2016 Nematbakhsh A, Brodskiy P, Xu Z, Zartman JJ, Alber M. Multi-scale Computational Model of Epithelial Cell Proliferation and Mechanics Biophysical Journal. 110: 307a. DOI: 10.1016/J.Bpj.2015.11.1648  0.78
2015 Kursawe J, Brodskiy PA, Zartman JJ, Baker RE, Fletcher AG. Capabilities and Limitations of Tissue Size Control through Passive Mechanical Forces. Plos Computational Biology. 11: e1004679. PMID 26713738 DOI: 10.1371/Journal.Pcbi.1004679  0.789
2015 Burnette M, Zartman JJ. Spatiotemporal patterning of polyamines in Drosophila development. Amino Acids. PMID 26386564 DOI: 10.1007/S00726-015-2093-Z  0.678
2015 Narciso C, Wu Q, Brodskiy P, Garston G, Baker R, Fletcher A, Zartman J. Patterning of wound-induced intercellular Ca(2+) flashes in a developing epithelium. Physical Biology. 12: 056005. PMID 26331891 DOI: 10.1088/1478-3975/12/5/056005  0.76
2014 Burnette M, Brito-Robinson T, Li J, Zartman J. An inverse small molecule screen to design a chemically defined medium supporting long-term growth of Drosophila cell lines Molecular Biosystems. 10: 2713-2723. PMID 25096480 DOI: 10.1039/C4Mb00155A  0.687
2014 Buchmann A, Alber M, Zartman JJ. Sizing it up: the mechanical feedback hypothesis of organ growth regulation. Seminars in Cell & Developmental Biology. 35: 73-81. PMID 25020200 DOI: 10.1016/J.Semcdb.2014.06.018  0.371
2014 Restrepo S, Zartman JJ, Basler K. Coordination of patterning and growth by the morphogen DPP. Current Biology : Cb. 24: R245-55. PMID 24650915 DOI: 10.1016/J.Cub.2014.01.055  0.593
2013 Zartman J, Restrepo S, Basler K. A high-throughput template for optimizing Drosophila organ culture with response-surface methods. Development (Cambridge, England). 140: 667-74. PMID 23293298 DOI: 10.1242/Dev.088872  0.578
2011 Zartman JJ, Cheung LS, Niepielko MG, Bonini C, Haley B, Yakoby N, Shvartsman SY. Pattern formation by a moving morphogen source. Physical Biology. 8: 045003. PMID 21750363 DOI: 10.1088/1478-3975/8/4/045003  0.792
2010 Zartman JJ, Shvartsman SY. Unit operations of tissue development: epithelial folding. Annual Review of Chemical and Biomolecular Engineering. 1: 231-46. PMID 22432580 DOI: 10.1146/Annurev-Chembioeng-073009-100919  0.608
2009 Zartman JJ, Kanodia JS, Cheung LS, Shvartsman SY. Feedback control of the EGFR signaling gradient: superposition of domain-splitting events in Drosophila oogenesis. Development (Cambridge, England). 136: 2903-11. PMID 19641013 DOI: 10.1242/Dev.039545  0.785
2009 Yan SJ, Zartman JJ, Zhang M, Scott A, Shvartsman SY, Li WX. Bistability coordinates activation of the EGFR and DPP pathways in Drosophila vein differentiation. Molecular Systems Biology. 5: 278. PMID 19536201 DOI: 10.1038/Msb.2009.35  0.596
2009 Zartman JJ, Kanodia JS, Yakoby N, Schafer X, Watson C, Schlichting K, Dahmann C, Shvartsman SY. Expression patterns of cadherin genes in Drosophila oogenesis. Gene Expression Patterns : Gep. 9: 31-6. PMID 18817893 DOI: 10.1016/J.Gep.2008.09.001  0.799
2008 Yakoby N, Bristow CA, Gong D, Schafer X, Lembong J, Zartman JJ, Halfon MS, Schüpbach T, Shvartsman SY. A combinatorial code for pattern formation in Drosophila oogenesis. Developmental Cell. 15: 725-37. PMID 19000837 DOI: 10.1016/J.Devcel.2008.09.008  0.769
2008 Zartman JJ, Yakoby N, Bristow CA, Zhou X, Schlichting K, Dahmann C, Shvartsman SY. Cad74A is regulated by BR and is required for robust dorsal appendage formation in Drosophila oogenesis. Developmental Biology. 322: 289-301. PMID 18708045 DOI: 10.1016/J.Ydbio.2008.07.027  0.804
2008 Zartman JJ, Shvartsman SY. The coordinated control of EGFR signaling by multiple feedback loops: An experimental and computational study in a developing tissue Aiche Annual Meeting, Conference Proceedings.  0.53
2008 Zartman J, Yakoby N, Kanodia JS, Shvartsman SY. Systems-level analysis of epithelial patterning and morphogenesis: The control of cytoskeleton and adhesion proteins by signaling pathways Aiche Annual Meeting, Conference Proceedings.  0.778
2007 Zartman JJ, Shvartsman SY. Enhancer organization: transistor with a twist or something in a different vein? Current Biology : Cb. 17: R1048-50. PMID 18088586 DOI: 10.1016/J.Cub.2007.10.036  0.542
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