Sourav Chatterji, Ph.D.

Affiliations: 
2006 University of California, Berkeley, Berkeley, CA 
Google:
"Sourav Chatterji"

Parents

Sign in to add mentor
Lior Pachter grad student 2006 UC Berkeley
 (Computational analyses of eukaryotic gene evolution.)
Jonathan A. Eisen post-doc UC Davis
BETA: Related publications

Publications

You can help our author matching system! If you notice any publications incorrectly attributed to this author, please sign in and mark matches as correct or incorrect.

Wu M, Chatterji S, Eisen JA. (2012) Accounting for alignment uncertainty in phylogenomics. Plos One. 7: e30288
Woyke T, Xie G, Copeland A, et al. (2009) Assembling the marine metagenome, one cell at a time. Plos One. 4: e5299
Wu D, Raymond J, Wu M, et al. (2009) Complete genome sequence of the aerobic CO-oxidizing thermophile Thermomicrobium roseum. Plos One. 4: e4207
Chatterji S, Yamazaki I, Bai Z, et al. (2008) CompostBin: A DNA composition-based algorithm for binning environmental shotgun reads Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 4955: 17-28
Clark AG, Eisen MB, et al. (2007) Evolution of genes and genomes on the Drosophila phylogeny. Nature. 450: 203-18
Chatterji S, Pachter L. (2007) Patterns of gene duplication and intron loss in the ENCODE regions suggest a confounding factor. Genomics. 90: 44-8
Chatterji S, Pachter L. (2006) Reference based annotation with GeneMapper. Genome Biology. 7: R29
Chatterji S, Pachter L. (2005) Large multiple organism gene finding by collapsed Gibbs sampling. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 12: 599-608
Breier AM, Chatterji S, Cozzarelli NR. (2004) Prediction of Saccharomyces cerevisiae replication origins. Genome Biology. 5: R22
Gibbs RA, Weinstock GM, Metzker ML, et al. (2004) Genome sequence of the Brown Norway rat yields insights into mammalian evolution. Nature. 428: 493-521
See more...