Ariel S. Schwartz, Ph.D.

Affiliations: 
2007 University of California, Berkeley, Berkeley, CA 
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"Ariel Schwartz"

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Lior Pachter grad student 2007 UC Berkeley
 (Posterior decoding methods for optimization and accuracy control of multiple alignments.)
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Publications

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Robson RL, Jones R, Robson RM, et al. (2015) Azotobacter Genomes: The Genome of Azotobacter chroococcum NCIMB 8003 (ATCC 4412). Plos One. 10: e0127997
Inskeep WP, Rusch DB, Jay ZJ, et al. (2010) Metagenomes from high-temperature chemotrophic systems reveal geochemical controls on microbial community structure and function. Plos One. 5: e9773
Ravasi T, Suzuki H, Cannistraci CV, et al. (2010) An atlas of combinatorial transcriptional regulation in mouse and man Cell. 141: 369
Schwartz AS, Yu J, Gardenour KR, et al. (2009) Cost-effective strategies for completing the interactome. Nature Methods. 6: 55-61
Margulies EH, Cooper GM, Asimenos G, et al. (2007) Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome. Genome Research. 17: 760-74
Schwartz AS, Pachter L. (2007) Multiple alignment by sequence annealing. Bioinformatics (Oxford, England). 23: e24-9
Schwartz AS, Divoli A, Hearst MA. (2007) Multiple alignment of citation sentences with conditional random fields and posterior decoding Emnlp-Conll 2007 - Proceedings of the 2007 Joint Conference On Empirical Methods in Natural Language Processing and Computational Natural Language Learning. 847-857
Divoli A, Hearst MA, Nakov PI, et al. (2006) Biotext team report for the TREC 2006 genomics track Nist Special Publication
Nakov P, Schwartz A, Wolf B, et al. (2005) Supporting annotation layers for natural language processing Acl-05 - 43rd Annual Meeting of the Association For Computational Linguistics, Proceedings of the Conference. 65-68
Oliver DE, Bhalotia G, Schwartz AS, et al. (2004) Tools for loading MEDLINE into a local relational database. Bmc Bioinformatics. 5: 146
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