Meromit Singer, Ph.D.

2012 Computer Science University of California, Berkeley, Berkeley, CA 
"Meromit Singer"


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Lior Pachter grad student 2012 UC Berkeley
 (Statistical algorithms in the study of mammalian DNA methylation.)
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Singer M, Pachter L. (2015) Controlling for conservation in genome-wide DNA methylation studies. Bmc Genomics. 16: 420
Singer M, Kosti I, Pachter L, et al. (2015) A diverse epigenetic landscape at human exons with implication for expression. Nucleic Acids Research. 43: 3498-508
Singer M, Engström A, Schönhuth A, et al. (2011) Determining coding CpG islands by identifying regions significant for pattern statistics on Markov chains. Statistical Applications in Genetics and Molecular Biology. 10
Meacham F, Boffelli D, Dhahbi J, et al. (2011) Identification and correction of systematic error in high-throughput sequence data. Bmc Bioinformatics. 12: 451
Martin DI, Singer M, Dhahbi J, et al. (2011) Phyloepigenomic comparison of great apes reveals a correlation between somatic and germline methylation states. Genome Research. 21: 2049-57
Singer M, Boffelli D, Dhahbi J, et al. (2010) MetMap enables genome-scale Methyltyping for determining methylation states in populations. Plos Computational Biology. 6: e1000888
Birney E, Stamatoyannopoulos JA, et al. (2007) Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project. Nature. 447: 799-816
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