Arun K. Ramani, Ph.D.

Affiliations: 
2005 University of Texas at Austin, Austin, Texas, U.S.A. 
Area:
proteomics, bioinformatics, systems biology
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"Arun Ramani"
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Edward M. Marcotte grad student 2005 UT Austin
 (Towards a comprehensive human protein -protein interaction network.)
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Publications

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Ramani AK, Li Z, Hart GT, et al. (2008) A map of human protein interactions derived from co-expression of human mRNAs and their orthologs. Molecular Systems Biology. 4: 180
Orr SJ, Wang R, Lea NC, et al. (2007) Systems Biology Analysis of Human Primary T Cells Identifies SAP145 as Rate Limiting for the G1→S Phase Transition. Blood. 110: 3350-3350
Ramani A, Mathura VS, Zhanhua C, et al. (2007) Protein-protein interaction and macromolecular visualization Bioinformatics: a Concept-Based Introduction. 79-96
Singh S, Hajela K, Ramani AK. (2007) SVM-BetaPred: Prediction of right-handed ß-helix fold from protein sequence Using SVM Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 4774: 108-119
Hart GT, Ramani AK, Marcotte EM. (2006) How complete are current yeast and human protein-interaction networks? Genome Biology. 7: 120
Ramani AK, Bunescu RC, Mooney RJ, et al. (2005) Consolidating the set of known human protein-protein interactions in preparation for large-scale mapping of the human interactome. Genome Biology. 6: R40
Bunescu R, Ge R, Kate RJ, et al. (2005) Comparative experiments on learning information extractors for proteins and their interactions. Artificial Intelligence in Medicine. 33: 139-55
Bork P, Jensen LJ, von Mering C, et al. (2004) Protein interaction networks from yeast to human. Current Opinion in Structural Biology. 14: 292-9
Ramani AK, Marcotte EM. (2003) Exploiting the co-evolution of interacting proteins to discover interaction specificity. Journal of Molecular Biology. 327: 273-84
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