Kasper D. Hansen

Affiliations: 
2009 University of California, Berkeley, Berkeley, CA 
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"Kasper Hansen"

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Sandrine Dudoit grad student 2009 UC Berkeley
 (Analyses of high-throughput gene expression data.)
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Publications

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Nellore A, Wilks C, Hansen KD, et al. (2016) Rail-dbGaP: analyzing dbGaP-protected data in the cloud with Amazon Elastic MapReduce. Bioinformatics (Oxford, England)
Vandiver AR, Idrizi A, Rizzardi L, et al. (2015) DNA methylation is stable during replication and cell cycle arrest. Scientific Reports. 5: 17911
Pacis A, Tailleux L, Morin AM, et al. (2015) Bacterial infection remodels the DNA methylation landscape of human dendritic cells. Genome Research
Fortin JP, Hansen KD. (2015) Reconstructing A/B compartments as revealed by Hi-C using long-range correlations in epigenetic data. Genome Biology. 16: 180
Vandiver AR, Irizarry RA, Hansen KD, et al. (2015) Age and sun exposure-related widespread genomic blocks of hypomethylation in nonmalignant skin. Genome Biology. 16: 80
Hong X, Hao K, Ladd-Acosta C, et al. (2015) Genome-wide association study identifies peanut allergy-specific loci and evidence of epigenetic mediation in US children. Nature Communications. 6: 6304
Huber W, Carey VJ, Gentleman R, et al. (2015) Orchestrating high-throughput genomic analysis with Bioconductor. Nature Methods. 12: 115-21
Ziller MJ, Hansen KD, Meissner A, et al. (2015) Coverage recommendations for methylation analysis by whole-genome bisulfite sequencing. Nature Methods. 12: 230-2, 1 p following
Huber W, Carey V, Davis S, et al. (2015) The Bioconductor channel in F1000Research F1000research. 4
Fortin JP, Labbe A, Lemire M, et al. (2014) Functional normalization of 450k methylation array data improves replication in large cancer studies. Genome Biology. 15: 503
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