Alejandro Berrio, PhD student

Affiliations: 
Biology University of Texas at Austin, Austin, Texas, U.S.A. 
Area:
Epigenetics, evolution and Behaviour
Google:
"Alejandro Berrio"
Cross-listing: Neurotree

Parents

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Mauricio Camargo research assistant 2005-2007 (Neurotree)
Steven M. Phelps grad student 2009-2016 UT Austin (Neurotree)
Gregory A. Wray post-doc 2016- Duke
David R. McClay post-doc 2019- Duke
BETA: Related publications

Publications

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Massri AJ, Greenstreet L, Afanassiev A, et al. (2021) Developmental single-cell transcriptomics in the Lytechinus variegatus sea urchin embryo. Development (Cambridge, England)
Tripp JA, Berrio A, McGraw LA, et al. (2021) Comparative neurotranscriptomics reveal widespread species differences associated with bonding. Bmc Genomics. 22: 399
Navarro-Escalante L, Hernandez-Hernandez EM, Nuñez J, et al. (2021) A coffee berry borer (Hypothenemus hampei) genome assembly reveals a reduced chemosensory receptor gene repertoire and male-specific genome sequences. Scientific Reports. 11: 4900
Massri AJ, Schiebinger GR, Berrio A, et al. (2021) Methodologies for Following EMT In Vivo at Single Cell Resolution. Methods in Molecular Biology (Clifton, N.J.). 2179: 303-314
Berrio A, Gartner V, Wray GA. (2020) Positive selection within the genomes of SARS-CoV-2 and other Coronaviruses independent of impact on protein function. Peerj. 8: e10234
Davidson PL, Guo H, Wang L, et al. (2020) Chromosomal-level genome assembly of the sea urchin Lytechinus variegatus substantially improves functional genomic analyses. Genome Biology and Evolution
Berrio A, Haygood R, Wray GA. (2020) Identifying branch-specific positive selection throughout the regulatory genome using an appropriate proxy neutral. Bmc Genomics. 21: 359
Edsall LE, Berrio A, Majoros WH, et al. (2019) Evaluating chromatin accessibility differences across multiple primate species using a joint modelling approach. Genome Biology and Evolution
Swain-Lenz D, Berrio A, Safi A, et al. (2019) Comparative analyses of chromatin landscape in white adipose tissue suggest humans may have less beigeing potential than other primates. Genome Biology and Evolution
Kilvitis HJ, Schrey AW, Ragsdale AK, et al. (2019) DNA methylation predicts immune gene expression in introduced house sparrows Passer domesticus Journal of Avian Biology. 50
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