Alejandro Berrio, PhD student

Biology University of Texas at Austin, Austin, Texas, U.S.A. 
Epigenetics, evolution and Behaviour
"Alejandro Berrio"
Cross-listing: Neurotree


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Mauricio Camargo research assistant 2005-2007 (Neurotree)
Steven M. Phelps grad student 2009-2016 UT Austin (Neurotree)
Gregory A. Wray post-doc 2016- Duke
David R. McClay post-doc 2019- Duke
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Davidson PL, Guo H, Swart JS, et al. (2022) Recent reconfiguration of an ancient developmental gene regulatory network in Heliocidaris sea urchins. Nature Ecology & Evolution
Massri AJ, Greenstreet L, Afanassiev A, et al. (2021) Developmental single-cell transcriptomics in the Lytechinus variegatus sea urchin embryo. Development (Cambridge, England)
Tripp JA, Berrio A, McGraw LA, et al. (2021) Comparative neurotranscriptomics reveal widespread species differences associated with bonding. Bmc Genomics. 22: 399
Navarro-Escalante L, Hernandez-Hernandez EM, Nuñez J, et al. (2021) A coffee berry borer (Hypothenemus hampei) genome assembly reveals a reduced chemosensory receptor gene repertoire and male-specific genome sequences. Scientific Reports. 11: 4900
Massri AJ, Schiebinger GR, Berrio A, et al. (2021) Methodologies for Following EMT In Vivo at Single Cell Resolution. Methods in Molecular Biology (Clifton, N.J.). 2179: 303-314
Berrio A, Gartner V, Wray GA. (2020) Positive selection within the genomes of SARS-CoV-2 and other Coronaviruses independent of impact on protein function. Peerj. 8: e10234
Davidson PL, Guo H, Wang L, et al. (2020) Chromosomal-level genome assembly of the sea urchin Lytechinus variegatus substantially improves functional genomic analyses. Genome Biology and Evolution
Berrio A, Haygood R, Wray GA. (2020) Identifying branch-specific positive selection throughout the regulatory genome using an appropriate proxy neutral. Bmc Genomics. 21: 359
Edsall LE, Berrio A, Majoros WH, et al. (2019) Evaluating chromatin accessibility differences across multiple primate species using a joint modelling approach. Genome Biology and Evolution
Swain-Lenz D, Berrio A, Safi A, et al. (2019) Comparative analyses of chromatin landscape in white adipose tissue suggest humans may have less beigeing potential than other primates. Genome Biology and Evolution
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