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Nick Goldman

Affiliations: 
European Bioinformatics Institute, Hinxton, England, United Kingdom 
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Parents

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Adrian E. Friday grad student 1988-1991 Cambridge

Children

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Tim Massingham grad student European Bioinformatics Institute
Sarah Parks grad student 2010- European Bioinformatics Institute
Kevin Gori grad student 2011- European Bioinformatics Institute
Greg Slodkowicz grad student 2012- European Bioinformatics Institute
Simon Whelan grad student 1997-2000 Cambridge
Lee Bofkin grad student 2006 European Bioinformatics Institute
Carolin Kosiol grad student 2002-2006 European Bioinformatics Institute
Fabio Pardi grad student 2009 European Bioinformatics Institute
Jacky Hess grad student 2010 European Bioinformatics Institute
Gregory Jordan grad student 2011 European Bioinformatics Institute
Tim Massingham post-doc European Bioinformatics Institute
Roland F. Schwarz post-doc European Bioinformatics Institute
Botond Sipos post-doc 2010- European Bioinformatics Institute
Jakub Truszkowski post-doc 2014- European Bioinformatics Institute
Martin Taylor post-doc 2006-2010 European Bioinformatics Institute
Ari Löytynoja post-doc 2003-2011 European Bioinformatics Institute
Christophe Dessimoz post-doc 2011-2013 European Bioinformatics Institute
Pietro Liò research scientist EMBL-European Bioinformatics Institute
Asif U. Tamuri research scientist 2012-2017 European Bioinformatics Institute

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Publications

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Kapli P, Kotari I, Telford MJ, et al. (2023) DNA Sequences Are as Useful as Protein Sequences for Inferring Deep Phylogenies. Systematic Biology
De Maio N, Kalaghatgi P, Turakhia Y, et al. (2023) Maximum likelihood pandemic-scale phylogenetics. Nature Genetics
Weilguny L, De Maio N, Munro R, et al. (2023) Dynamic, adaptive sampling during nanopore sequencing using Bayesian experimental design. Nature Biotechnology
De Maio N, Boulton W, Weilguny L, et al. (2022) phastSim: Efficient simulation of sequence evolution for pandemic-scale datasets. Plos Computational Biology. 18: e1010056
De Maio N, Kalaghatgi P, Turakhia Y, et al. (2022) Maximum likelihood pandemic-scale phylogenetics. Biorxiv : the Preprint Server For Biology
McBroome J, Thornlow B, Hinrichs AS, et al. (2021) A daily-updated database and tools for comprehensive SARS-CoV-2 mutation-annotated trees. Molecular Biology and Evolution
De Maio N, Alekseyenko AV, Coleman-Smith WJ, et al. (2021) A phylogenetic approach for weighting genetic sequences. Bmc Bioinformatics. 22: 285
De Maio N, Weilguny L, Walker CR, et al. (2021) phastSim: efficient simulation of sequence evolution for pandemic-scale datasets. Biorxiv : the Preprint Server For Biology
Hodcroft EB, De Maio N, Lanfear R, et al. (2021) Want to track pandemic variants faster? Fix the bioinformatics bottleneck. Nature. 591: 30-33
Turakhia Y, De Maio N, Thornlow B, et al. (2020) Stability of SARS-CoV-2 phylogenies. Plos Genetics. 16: e1009175
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