James A. Cotton
Affiliations: | Wellcome Trust Sanger Institute, England, United Kingdom |
Area:
Phlyogenetics, Genome EvolutionGoogle:
"James Cotton"Parents
Sign in to add mentor| Roderic D. M. Page | grad student | 1999-2002 | University of Glasgow |
| Mark Wilkinson | post-doc | 2003-2006 | The Natural History Museum |
| James O. McInerney | post-doc | 2006-2008 | National University of Ireland Maynooth |
| Matthew Berriman | research scientist | Wellcome Sanger Institute |
Children
Sign in to add trainee| Veronica Comper | grad student | 2009-2013 | Queen Mary University of London |
| Hao-Chih Kuo | grad student | 2009-2013 | Queen Mary, University of London |
| Tom Crellen | grad student | 2013-2016 | Wellcome Trust Sanger Institute |
BETA: Related publications
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Publications
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| Doyle SR, Laing R, Bartley D, et al. (2022) Genomic landscape of drug response reveals mediators of anthelmintic resistance. Cell Reports. 41: 111522 |
| Vianney TJ, Berger DJ, Doyle SR, et al. (2022) Genome-wide analysis of Schistosoma mansoni reveals limited population structure and possible praziquantel drug selection pressure within Ugandan hot-spot communities. Plos Neglected Tropical Diseases. 16: e0010188 |
| Berger DJ, Léger E, Sankaranarayanan G, et al. (2022) Genomic evidence of contemporary hybridization between Schistosoma species. Plos Pathogens. 18: e1010706 |
| Baptista RP, Li Y, Sateriale A, et al. (2021) Long-read assembly and comparative evidence-based reanalysis of genome sequences reveals expanded transporter repertoire and duplication of entire chromosome ends including subtelomeric regions. Genome Research |
| Berger DJ, Crellen T, Lamberton PHL, et al. (2021) Whole-genome sequencing of Schistosoma mansoni reveals extensive diversity with limited selection despite mass drug administration. Nature Communications. 12: 4776 |
| Durrant C, Thiele EA, Holroyd N, et al. (2020) Population genomic evidence that human and animal infections in Africa come from the same populations of Dracunculus medinensis. Plos Neglected Tropical Diseases. 14: e0008623 |
| Doyle SR, Tracey A, Laing R, et al. (2020) Genomic and transcriptomic variation defines the chromosome-scale assembly of Haemonchus contortus, a model gastrointestinal worm. Communications Biology. 3: 656 |
| Van den Broeck F, Savill NJ, Imamura H, et al. (2020) Ecological divergence and hybridization of Neotropical parasites. Proceedings of the National Academy of Sciences of the United States of America |
| Imamura H, Monsieurs P, Jara M, et al. (2020) Evaluation of whole genome amplification and bioinformatic methods for the characterization of Leishmania genomes at a single cell level. Scientific Reports. 10: 15043 |
| Cotton JA, Franssen SU. (2020) A Way Straight-Forward for Leishmania Genetics. Trends in Parasitology. 36: 719-721 |