Michael A. Gilchrist, Ph. D

Affiliations: 
Ecology and Evolutionary Biology The University of Tennessee, Knoxville, TN, United States 
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"Michael Gilchrist"
Cross-listing: Computational Biology Tree

Parents

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Janis Antonovics grad student 1996-2001 Duke
 (Virulence, transmission, and added mortality: Measuring and modeling the relationships that drive parasite evolution.)
William G. Wilson grad student 1996-2001 Duke
 (Virulence, transmission, and added mortality: Measuring and modeling the relationships that drive parasite evolution.)
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Publications

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Beaulieu JM, O'Meara BC, Gilchrist MA. (2020) A spatially-explicit model of stabilizing selection for improving phylogenetic inference. Molecular Biology and Evolution
Landerer C, O'Meara BC, Zaretzki R, et al. (2020) Unlocking a signal of introgression from codons in Lachancea kluyveri using a mutation-selection model. Bmc Evolutionary Biology. 20: 109
Cope AL, O'Meara BC, Gilchrist MA. (2020) Gene expression of functionally-related genes coevolves across fungal species: detecting coevolution of gene expression using phylogenetic comparative methods. Bmc Genomics. 21: 370
Jiao J, Gilchrist MA, Fefferman NH. (2020) The impact of host metapopulation structure on short-term evolutionary rescue in the face of a novel pathogenic threat Global Ecology and Conservation. 23
Beaulieu JM, O'Meara BC, Zaretzki R, et al. (2018) Population Genetics Based Phylogenetics Under Stabilizing Selection for an Optimal Amino Acid Sequence: A Nested Modeling Approach. Molecular Biology and Evolution
Cope AL, Hettich RL, Gilchrist MA. (2018) Quantifying codon usage in signal peptides: Gene expression and amino acid usage explain apparent selection for inefficient codons. Biochimica Et Biophysica Acta. Biomembranes. 1860: 2479-2485
Landerer C, Cope A, Zaretzki R, et al. (2018) AnaCoDa: Analyzing Codon Data with Bayesian mixture models. Bioinformatics (Oxford, England)
Kubatko L, Shah P, Herbei R, et al. (2015) A codon model of nucleotide substitution with selection on synonymous codon usage. Molecular Phylogenetics and Evolution
Gilchrist MA, Chen WC, Shah P, et al. (2015) Estimating Gene Expression and Codon-Specific Translational Efficiencies, Mutation Biases, and Selection Coefficients from Genomic Data Alone. Genome Biology and Evolution. 7: 1559-79
Blackmore ER, Groth SW, Chen DG, et al. (2014) Depressive symptoms and proinflammatory cytokines across the perinatal period in African American women. Journal of Psychosomatic Obstetrics and Gynaecology. 35: 8-15
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