H. Bradley Shaffer, Ph.D.

Affiliations: 
University of California, Davis, Davis, CA 
 Ecology and Evolutionary Biology University of California, Los Angeles, Los Angeles, CA 
Area:
Evolutionary and conservation biology of amphibians and reptiles
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"H. Shaffer"
Cross-listing: Terrestrial Ecology Tree

Children

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Matthew K. Fujita research assistant 2001 UC Davis
Gideon Bradburd grad student UC Davis
Evan M. McCartney-Melstad grad student UCLA
David Parichy grad student (Neurotree)
Ian Jen Wang grad student UC Davis
Carlos Davidson grad student 2000 UC Davis
Tag Nicholas Engstrom grad student 2003 UC Davis
Benjamin Minault Fitzpatrick grad student 2004 UC Davis
Michael Francis Benard grad student 2005 UC Davis
Karen Elizabeth Leyse grad student 2005 UC Davis
Robert Thomson grad student 2010 UC Davis
Ian J. Wang grad student 2010 UC Davis
Fredric Janzen post-doc 1992-1994 UC Davis
S. Randal Voss post-doc 1994-1998 UC Davis (Terrestrial Ecology Tree)
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Publications

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Stanford CB, Iverson JB, Rhodin AGJ, et al. (2020) Turtles and Tortoises Are in Trouble. Current Biology : Cb. 30: R721-R735
Nicholson EG, Manzo S, Devereux Z, et al. (2020) Historical museum collections and contemporary population studies implicate roads and introduced predatory bullfrogs in the decline of western pond turtles. Peerj. 8: e9248
Bucciarelli GM, Clark MA, Delaney KS, et al. (2020) Amphibian responses in the aftermath of extreme climate events. Scientific Reports. 10: 3409
McCartney-Melstad E, Gidiş M, Shaffer HB. (2019) An empirical pipeline for choosing the optimal clustering threshold in RADseq studies. Molecular Ecology Resources
Wielstra B, McCartney-Melstad E, Arntzen JW, et al. (2019) Phylogenomics of the adaptive radiation of Triturus newts supports gradual ecological niche expansion towards an incrementally aquatic lifestyle. Molecular Phylogenetics and Evolution. 133: 120-127
McCartney-Melstad E, Vu JK, Shaffer HB. (2018) Genomic data recover previously undetectable fragmentation effects in an endangered amphibian. Molecular Ecology
Bucciarelli GM, Suh D, Davis A, et al. (2018) Assessing effects of non-native crayfish on mosquito survival. Conservation Biology : the Journal of the Society For Conservation Biology
McCartney-Melstad E, Gidiş M, Shaffer HB. (2018) Population genomic data reveal extreme geographic subdivision and novel conservation actions for the declining foothill yellow-legged frog. Heredity
Peralta-García A, Adams AJ, Briggs CJ, et al. (2018) Occurrence of Batrachochytrium dendrobatidis in anurans of the Mediterranean region of Baja California, México. Diseases of Aquatic Organisms. 127: 193-200
Thomson RC, Spinks PQ, Bradley Shaffer H. (2017) Molecular phylogeny and divergence of the Map Turtles (Emydidae: Graptemys). Molecular Phylogenetics and Evolution
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