Vincent Daubin, Ph.D.
Affiliations: | LBBE, UMR5558 | LBBE, UMR5558, Université Lyon 1, Université de Lyon, Villeurbanne, Auvergne-Rhône-Alpes, France |
Area:
Molecular Evolution; PhylogeneticsWebsite:
http://lbbe.univ-lyon1.fr/-Daubin-Vincent-.html?lang=enGoogle:
"Vincent Daubin"Cross-listing: Computational Biology Tree
Parents
Sign in to add mentor| Manolo Gouy | grad student | 1999-2002 | LBBE, UMR5558, Université Lyon 1, Université de Lyon |
| Guy Perrière | grad student | 1999-2002 | LBBE, UMR5558, Université Lyon 1, Université de Lyon |
Children
Sign in to add trainee| Sophie Abby | grad student | 2006-2010 | LBBE, UMR5558, Université Lyon 1, Université de Lyon |
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Publications
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| Menet H, Daubin V, Tannier E. (2022) Phylogenetic reconciliation. Plos Computational Biology. 18: e1010621 |
| Grébert T, Garczarek L, Daubin V, et al. (2022) Diversity and evolution of pigment types in marine Synechococcus cyanobacteria. Genome Biology and Evolution |
| Penel S, Menet H, Tricou T, et al. (2022) Thirdkind: displaying phylogenetic encounters beyond 2-level reconciliation. Bioinformatics (Oxford, England) |
| Szöllősi GJ, Höhna S, Williams TA, et al. (2021) Relative time constraints improve molecular dating. Systematic Biology |
| Comte N, Morel B, Hasić D, et al. (2020) Treerecs: an integrated phylogenetic tool, from sequences to reconciliations. Bioinformatics (Oxford, England) |
| Marais GAB, Batut B, Daubin V. (2020) Genome Evolution: Mutation Is the Main Driver of Genome Size in Prokaryotes. Current Biology : Cb. 30: R1083-R1085 |
| Duchemin W, Gence G, Arigon Chifolleau AM, et al. (2018) RecPhyloXML - a format for reconciled gene trees. Bioinformatics (Oxford, England) |
| Davín AA, Tannier E, Williams TA, et al. (2018) Gene transfers can date the tree of life. Nature Ecology & Evolution |
| Lassalle F, Planel R, Penel S, et al. (2017) Ancestral genome estimation reveals the history of ecological diversification in Agrobacterium. Genome Biology and Evolution |
| Duchemin W, Anselmetti Y, Patterson M, et al. (2017) DeCoSTAR: Reconstructing the ancestral organization of genes or genomes using reconciled phylogenies. Genome Biology and Evolution |