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Kateryna Makova, Ph.D.

Affiliations: 
Biology Pennsylvania State University, State College, PA, United States 
Area:
Molecular evolution, comparative genomics
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Parents

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Robert J. Baker grad student 1995-1999 Texas Tech
Wen-Hsiung Li post-doc 1999-2003 Chicago

Children

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Erika M. Kvikstad grad student 2003-2009 Penn State
Chungoo Park grad student 2004-2010 Penn State
Yogeshwar D. Kelkar grad student 2005-2010 Penn State
Melissa A. Wilson Sayres grad student 2005-2011 Penn State
Guruprasad Ananda grad student 2006-2012 Penn State
Rebeca Campos-Sanchez grad student 2009-2015 Penn State
Arkarachai Fungtammasan grad student 2009-2016 Penn State
Boris Rebolledo-Jaramillo grad student 2011-2016 Penn State
Hiroki Goto post-doc 2006-2010 Penn State
Benjamin Dickins post-doc 2010-2012 Penn State

Collaborators

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Publications

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Stoler N, Arbeithuber B, Povysil G, et al. (2020) Family reunion via error correction: an efficient analysis of duplex sequencing data. Bmc Bioinformatics. 21: 96
Barrett A, Arbeithuber B, Zaidi A, et al. (2020) Pronounced somatic bottleneck in mitochondrial DNA of human hair. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 375: 20190175
Zaidi AA, Wilton PR, Su MS, et al. (2019) Bottleneck and selection in the germline and maternal age influence transmission of mitochondrial DNA in human pedigrees. Proceedings of the National Academy of Sciences of the United States of America
Vegesna R, Tomaszkiewicz M, Medvedev P, et al. (2019) Dosage regulation, and variation in gene expression and copy number of human Y chromosome ampliconic genes. Plos Genetics. 15: e1008369
Rangavittal S, Stopa N, Tomaszkiewicz M, et al. (2019) DiscoverY: a classifier for identifying Y chromosome sequences in male assemblies. Bmc Genomics. 20: 641
Cechova M, Harris RS, Tomaszkiewicz M, et al. (2019) High satellite repeat turnover in great apes studied with short- and long-read technologies. Molecular Biology and Evolution
Cremona M, Xu H, Makova K, et al. (2019) Functional data analysis for computational biology. Bioinformatics (Oxford, England)
Zaidi AA, Makova KD. (2019) Investigating mitonuclear interactions in human admixed populations. Nature Ecology & Evolution
Guiblet W, Cremona M, Cechova M, et al. (2018) Long-read sequencing technology indicates genome-wide effects of non-B DNA on polymerization speed and error rate. Genome Research
Warris S, Schijlen E, van de Geest H, et al. (2018) Correcting palindromes in long reads after whole-genome amplification. Bmc Genomics. 19: 798
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