Jonathon P. Bollback, Ph.D.

Biology University of Rochester, Rochester, NY 
Evolutionary Biology
"Jonathon Bollback"


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John P. Huelsenbeck grad student 1998-2005 Rochester
 (Experimental bacteriophage evolution and theoretical systematics.)
Rasmus Nielsen post-doc Copenhagen University
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Kupczok A, Bollback JP. (2014) Motif depletion in bacteriophages infecting hosts with CRISPR systems. Bmc Genomics. 15: 663
Ward MJ, Lycett SJ, Avila D, et al. (2013) Evolutionary interactions between haemagglutinin and neuraminidase in avian influenza. Bmc Evolutionary Biology. 13: 222
Kupczok A, Bollback JP. (2013) Probabilistic models for CRISPR spacer content evolution. Bmc Evolutionary Biology. 13: 54
Gravlund P, Aaris-Sørensen K, Hofreiter M, et al. (2012) Ancient DNA extracted from Danish aurochs (Bos primigenius): genetic diversity and preservation. Annals of Anatomy = Anatomischer Anzeiger : Official Organ of the Anatomische Gesellschaft. 194: 103-11
Guinane CM, Ben Zakour NL, Tormo-Mas MA, et al. (2010) Evolutionary genomics of Staphylococcus aureus reveals insights into the origin and molecular basis of ruminant host adaptation. Genome Biology and Evolution. 2: 454-66
Bollback JP, Huelsenbeck JP. (2009) Parallel genetic evolution within and between bacteriophage species of varying degrees of divergence. Genetics. 181: 225-34
Bollback JP, York TL, Nielsen R. (2008) Estimation of 2Nes from temporal allele frequency data. Genetics. 179: 497-502
Bollback JP, Gardner PP, Nielsen R. (2008) Estimating the history of mutations on a phylogeny Ancestral Sequence Reconstruction
Huelsenbeck JP, Bollback JP. (2008) Application of the Likelihood Function in Phylogenetic Analysis Handbook of Statistical Genetics: Third Edition. 1: 460-488
Petersen L, Bollback JP, Dimmic M, et al. (2007) Genes under positive selection in Escherichia coli. Genome Research. 17: 1336-43
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