Bryan Kolaczkowski, Ph.D.
Affiliations: | 2010- | University of Florida, Gainesville, Gainesville, FL, United States |
Website:
https://microcell.ufl.edu/people/faculty-directory/kolaczkowski/Google:
"Bryan Kolaczkowski"Parents
Sign in to add mentorJoseph W. Thornton | grad student | 2006 | University of Oregon | |
(Deconstructing phylogenetic reconstruction: Effects of assumption violations on evolutionary inference.) | ||||
Kimmen V. Sjölander | post-doc | 2008-2009 | UC Berkeley (Computational Biology Tree) | |
Andrew D. Kern | post-doc | 2009-2010 | Dartmouth (FlyTree) |
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Publications
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Garcia AK, Kolaczkowski B, Kaçar B. (2022) Reconstruction of nitrogenase predecessors suggests origin from maturase-like proteins. Genome Biology and Evolution |
Jia H, Aadland K, Kolaczkowski O, et al. (2021) Direct molecular evidence for an ancient, conserved developmental toolkit controlling post-transcriptional gene regulation in land plants. Molecular Biology and Evolution |
Neuwald AF, Kolaczkowski BD, Altschul SF. (2021) eCOMPASS: evaluative comparison of multiple protein alignments by statistical score. Bioinformatics (Oxford, England) |
Aadland K, Kolaczkowski B. (2020) Alignment-Integrated Reconstruction of Ancestral Sequences Improves Accuracy. Genome Biology and Evolution |
Garcia AK, McShea H, Kolaczkowski B, et al. (2020) Reconstructing the evolutionary history of nitrogenases: Evidence for ancestral molybdenum-cofactor utilization. Geobiology |
Roesch LFW, Dobbler PT, Pylro VS, et al. (2019) PIME: A package for discovery of novel differences among microbial communities. Molecular Ecology Resources |
Timilsina S, Pereira-Martin JA, Minsavage GV, et al. (2019) Multiple Recombination Events Drive the Current Genetic Structure of in Florida. Frontiers in Microbiology. 10: 448 |
Sng NJ, Kolaczkowski B, Ferl RJ, et al. (2019) A member of the CONSTANS-Like protein family is a putative regulator of reactive oxygen species homeostasis and spaceflight physiological adaptation. Aob Plants. 11: ply075 |
Aadland K, Pugh C, Kolaczkowski B. (2019) High-Throughput Reconstruction of Ancestral Protein Sequence, Structure, and Molecular Function. Methods in Molecular Biology (Clifton, N.J.). 1851: 135-170 |
Jia H, Kolaczkowski O, Rolland J, et al. (2017) Increased Affinity for RNA Targets Evolved Early in Animal and Plant Dicer Lineages through Different Structural Mechanisms. Molecular Biology and Evolution |