Thomas J. Sharpton, PhD

Affiliations: 
Microbiology Oregon State University, Corvallis, OR 
Area:
Metagenomics, Comparative Genomics, Bioinformatics
Website:
http://microbiology.science.oregonstate.edu/content/thomas-sharpton
Google:
""Thomas Sharpton""

Parents

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Sandrine Dudoit grad student 2004-2009 UC Berkeley
John W. Taylor grad student 2004-2009 UC Berkeley
 (Investigations of natural genomic variation in the fungi.)
Jonathan A. Eisen post-doc UC Davis
Katherine S. Pollard post-doc 2010-2013 Gladstone Institute (UCSF)

Collaborators

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Jason E. Stajich collaborator 2008-
BETA: Related publications

Publications

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Mirzayi C, Renson A, et al. (2021) Reporting guidelines for human microbiome research: the STORMS checklist. Nature Medicine
Couch CE, Arnold HK, Crowhurst RS, et al. (2020) Bighorn sheep gut microbiomes associate with genetic and spatial structure across a metapopulation. Scientific Reports. 10: 6582
Kashyap A, Rhodes A, Kronmiller B, et al. (2020) Pan-tissue transcriptome analysis of long noncoding RNAs in the American beaver Castor canadensis. Bmc Genomics. 21: 153
Flannery JE, Stagaman K, Burns AR, et al. (2020) Gut Feelings Begin in Childhood: the Gut Metagenome Correlates with Early Environment, Caregiving, and Behavior. Mbio. 11
Jiang D, Sharpton T, Jiang Y. (2020) Microbial Interaction Network Estimation via Bias-Corrected Graphical Lasso Statistics in Biosciences. 1-22
Jiang D, Armour CR, Hu C, et al. (2019) Microbiome Multi-Omics Network Analysis: Statistical Considerations, Limitations, and Opportunities. Frontiers in Genetics. 10: 995
Neves ALA, Chen Y, Lê Cao KA, et al. (2019) Taxonomic and functional assessment using metatranscriptomics reveals the effect of Angus cattle on rumen microbial signatures. Animal : An International Journal of Animal Bioscience. 1-14
Armour CR, Nayfach S, Pollard KS, et al. (2019) A Metagenomic Meta-analysis Reveals Functional Signatures of Health and Disease in the Human Gut Microbiome. Msystems. 4
Armour CR, Nayfach S, Pollard KS, et al. (2019) A Metagenomic Meta-analysis Reveals Functional Signatures of Health and Disease in the Human Gut Microbiome. Msystems. 4
Li Y, Li Y, Jin W, et al. (2019) Combined Genomic, Transcriptomic, Proteomic, and Physiological Characterization of the Growth of sp. F1 in Monoculture and Co-culture With a Syntrophic Methanogen. Frontiers in Microbiology. 10: 435
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