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|Abou Chakra M, Hall BK, Stone JR. (2014) Using information in taxonomists' heads to resolve hagfish and lamprey relationships and recapitulate craniate-vertebrate phylogenetic history Historical Biology. 26: 652-660|
|Stone JR, Hall BK. (2006) Review article - A system for analysing features in studies integrating ecology, development, and evolution Biology and Philosophy. 21: 25-40|
|Stone JR, Hall BK. (2004) Latent homologues for the neural crest as an evolutionary novelty. Evolution & Development. 6: 123-9|