Parents
Sign in to add mentorNicole T. Perna | grad student | 2001-2006 | UW Madison | |
(Computational analysis of genome evolution.) | ||||
Jonathan A. Eisen | post-doc | UC Davis |
BETA: Related publications
See more...
Publications
You can help our author matching system! If you notice any publications incorrectly attributed to this author, please sign in and mark matches as correct or incorrect. |
Brito BP, Frost MJ, Anantanawat K, et al. (2023) Expanding the range of the respiratory infectome in Australian feedlot cattle with and without respiratory disease using metatranscriptomics. Microbiome. 11: 158 |
Krishnan S, DeMaere MZ, Beck D, et al. (2023) Rhometa: Population recombination rate estimation from metagenomic read datasets. Plos Genetics. 19: e1010683 |
Meyer F, Fritz A, Deng ZL, et al. (2022) Critical Assessment of Metagenome Interpretation: the second round of challenges. Nature Methods. 19: 429-440 |
Gaio D, Anantanawat K, To J, et al. (2022) Hackflex: low-cost, high-throughput, Illumina Nextera Flex library construction. Microbial Genomics. 8 |
DeMaere MZ, Darling AE. (2021) qc3C: Reference-free quality control for Hi-C sequencing data. Plos Computational Biology. 17: e1008839 |
Gaio D, DeMaere MZ, Anantanawat K, et al. (2021) Post-weaning shifts in microbiome composition and metabolism revealed by over 25 000 pig gut metagenome-assembled genomes. Microbial Genomics. 7 |
Quince C, Nurk S, Raguideau S, et al. (2021) STRONG: metagenomics strain resolution on assembly graphs. Genome Biology. 22: 214 |
Vicedomini R, Quince C, Darling AE, et al. (2021) Strainberry: automated strain separation in low-complexity metagenomes using long reads. Nature Communications. 12: 4485 |
Hastak P, Fourment M, Darling AE, et al. (2020) ST8196 is a novel, locally evolved, and extensively drug resistant pathogenic lineage within the ST131 clonal complex. Emerging Microbes & Infections. 1-35 |
Zingali T, Reid CJ, Chapman TA, et al. (2020) Whole Genome Sequencing Analysis of Porcine Faecal Commensal Carrying Class 1 Integrons from Sows and Their Offspring. Microorganisms. 8 |