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| Kapun M, Nunez JCB, Bogaerts-Márquez M, et al. (2021) Drosophila Evolution over Space and Time (DEST) - A New Population Genomics Resource. Molecular Biology and Evolution |
| Wallace MA, Coffman KA, Gilbert C, et al. (2021) The discovery, distribution, and diversity of DNA viruses associated with in Europe. Virus Evolution. 7: veab031 |
| Kapun M, Barrón MG, Staubach F, et al. (2020) Genomic analysis of European Drosophila melanogaster populations reveals longitudinal structure, continent-wide selection, and previously unknown DNA viruses. Molecular Biology and Evolution |
| Orengo DJ, Puerma E, Cereijo U, et al. (2019) The molecular genealogy of sequential overlapping inversions implies both homologous chromosomes of a heterokaryotype in an inversion origin. Scientific Reports. 9: 17009 |
| Orengo DJ, Puerma E, Aguadé M. (2019) The molecular characterization of fixed inversions breakpoints unveils the ancestral character of the Drosophila guanche chromosomal arrangements. Scientific Reports. 9: 1706 |
| Puerma E, Orengo DJ, Cruz F, et al. (2018) The high-quality genome sequence of the oceanic island endemic species Drosophila guanche reveals signals of adaptive evolution in genes related to flight and genome stability. Genome Biology and Evolution |
| Puerma E, Orengo DJ, Aguadé M. (2017) Inversion evolutionary rates might limit the experimental identification of inversion breakpoints in non-model species. Scientific Reports. 7: 17281 |
| Orengo DJ, Puerma E, Cereijo U, et al. (2017) An easy route to the massive karyotyping of complex chromosomal arrangements in Drosophila. Scientific Reports. 7: 12717 |
| Orengo DJ, Puerma E, Papaceit M, et al. (2017) Dense gene physical maps of the non-model species Drosophila subobscura. Chromosome Research : An International Journal On the Molecular, Supramolecular and Evolutionary Aspects of Chromosome Biology |
| Puerma E, Orengo DJ, Aguadé M. (2016) Multiple and diverse structural changes affect the breakpoint regions of polymorphic inversions across the Drosophila genus. Scientific Reports. 6: 36248 |