Katherine S. Pollard, PhD

Affiliations: 
Gladstone Institute University of California, San Francisco, San Francisco, CA 
Area:
Evolutionary Genomics, Statistics
Website:
http://docpollard.org
Google:
"Katherine Pollard"

Parents

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Sandrine Dudoit grad student 1998-2003 UC Berkeley
Mark J. van der Laan grad student 1998-2003 UC Berkeley (MathTree)
 (Computationally intensive statistical methods for analysis of gene expression data.)
David Henry Haussler post-doc 2003-2005 UC Santa Cruz (Computational Biology Tree)
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Publications

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Dekker J, Alber F, Aufmkolk S, et al. (2023) Spatial and temporal organization of the genome: Current state and future aims of the 4D nucleome project. Molecular Cell
Sullivan PF, Meadows JRS, Gazal S, et al. (2023) Leveraging base-pair mammalian constraint to understand genetic variation and human disease. Science (New York, N.Y.). 380: eabn2937
Keough KC, Whalen S, Inoue F, et al. (2023) Three-dimensional genome rewiring in loci with human accelerated regions. Science (New York, N.Y.). 380: eabm1696
Christmas MJ, Kaplow IM, Genereux DP, et al. (2023) Evolutionary constraint and innovation across hundreds of placental mammals. Science (New York, N.Y.). 380: eabn3943
Sullivan PF, Meadows JRS, Gazal S, et al. (2023) Leveraging Base Pair Mammalian Constraint to Understand Genetic Variation and Human Disease. Biorxiv : the Preprint Server For Biology
Spanogiannopoulos P, Kyaw TS, Guthrie BGH, et al. (2022) Host and gut bacteria share metabolic pathways for anti-cancer drug metabolism. Nature Microbiology
Whalen S, Pollard KS. (2022) Enhancer Function and Evolutionary Roles of Human Accelerated Regions. Annual Review of Genetics
Lyalina S, Stepanauskas R, Wu F, et al. (2022) Single cell genome sequencing of laboratory mouse microbiota improves taxonomic and functional resolution of this model microbial community. Plos One. 17: e0261795
Whalen S, Schreiber J, Noble WS, et al. (2021) Navigating the pitfalls of applying machine learning in genomics. Nature Reviews. Genetics
Bradley PH, Pollard KS. (2020) Building a chemical blueprint for human blood. Nature
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